9
week
animal age at collection
mailto:chankyu@konkuk.ac.kr
availability
olfactory epithelium
http://purl.obolibrary.org/obo/UBERON_0001997
description
juvenile stage
http://purl.obolibrary.org/obo/UBERON_0000112
developmental stage
normal
http://purl.obolibrary.org/obo/PATO_0000461
health status at collection
specimen from organism
http://purl.obolibrary.org/obo/OBI_0001479
material
Sus scrofa
http://purl.obolibrary.org/obo/NCBITaxon_9823
organism
olfactory epithelium
http://purl.obolibrary.org/obo/UBERON_0001997
organism part
FAANG
project
2013-08
YYYY-MM
specimen collection date
https://data.faang.org/api/fire_api/samples/WUR_SOP_animal_sampling_20160405.pdf
specimen collection protocol
This study try to figure out the DNA methylation of swine which is one of important biomedical model animals as a part of the international swine methylome consortium. The single nucleotide resolution of swine DNA methylation profiles were generated using reduced representative bisulfite sequencing.The genomic DNA was isolated from five distinct tissues (neocortex, olfactory epithelium, liver, femoral muscle and spleen) of three different nine week-old male pigs and pulmonary alveolar macrophage cell line from the ATCC (3D4/2). The genomic DNA from the each tissues of three individual were pooled according to the same tissue type before the making a RRBS library.
submission description
GSB-3257
submission identifier
Konkuk-FAANG-MinKyeung-pig-170131
submission title