characteristics.text: SAMN00149621
characteristics.characteristic: External Id
characteristics.text: DOE JGI
characteristics.characteristic: INSDC center name
characteristics.text: 2011-02-08T18:29:46.487Z
characteristics.characteristic: INSDC first public
characteristics.text: 2014-03-28T17:15:45.537Z
characteristics.characteristic: INSDC last update
characteristics.text: SRS150404
characteristics.characteristic: INSDC secondary accession
characteristics.text: live
characteristics.characteristic: INSDC status
characteristics.text: Generic
characteristics.characteristic: NCBI submission model
characteristics.text: Generic.1.0
characteristics.characteristic: NCBI submission package
characteristics.text: SRS150404
characteristics.characteristic: SRA accession
characteristics.text: High molecular weight DNA extracted from the post-incubated switchgrass adherent rumen microbiome was used as a template for three different sequencing libraries. Two whole genome shotgun sequencing libraries with insert size 200 bp and 300 bp were independently generated from DNA, followed by high-throughput sequencing from both ends, one by 2x125bp using Illumina GAIIx and one by 2x100bp using Illumina HiSeq2000 instruments. Two additional libraries were built with insert sizes of 3kb and 5kb respectively to facilitate genome assembly. Both of these two “jumping” libraries were sequenced using Illumina GAIIx by 2x75bp pair-end sequencing.
characteristics.characteristic: description
characteristics.text: bovine gut metagenome
characteristics.ontologyTerms: http://purl.obolibrary.org/obo/NCBITaxon_506599
characteristics.characteristic: organism
characteristics.text: Metagenomic DNA from Switch grass fiber attached community in cow rumen, 72 hour post incubation
characteristics.characteristic: title