characteristics.text: SAMN00002206
characteristics.characteristic: External Id
characteristics.text: J. Craig Venter Institute
characteristics.characteristic: INSDC center name
characteristics.text: 2009-03-31T12:04:09.613Z
characteristics.characteristic: INSDC first public
characteristics.text: 2015-02-13T07:31:42.233Z
characteristics.characteristic: INSDC last update
characteristics.text: SRS002407
characteristics.characteristic: INSDC secondary accession
characteristics.text: live
characteristics.characteristic: INSDC status
characteristics.text: MIGS.ba
characteristics.characteristic: NCBI submission model
characteristics.text: MIGS.ba.5.0
characteristics.characteristic: NCBI submission package
characteristics.text: SRS002407
characteristics.characteristic: SRA accession
characteristics.text: not determined
characteristics.characteristic: assembly
characteristics.text: terrestrial biome [ENVO:00000446]
characteristics.characteristic: biome
characteristics.text: not determined
characteristics.characteristic: collection date
characteristics.text: Lactobacillus gasseri appears to be the main species of lactobacilli that inhabits the human gastrointestinal tract. It is a rod-shaped, gram-positive anaerobe. Of the lactobacilli, it is the most amenable to DNA introduction and manipulation which should prove useful in the functional genomic analysis of this species. It has been shown to be an effective probiotic in suppressing Helicobacter pylori infections in humans. This strain was isolated from the human vaginal cavity.
characteristics.characteristic: description
characteristics.text: 1820000
characteristics.characteristic: estimated size
characteristics.text: human-associated habitat [ENVO:00009003]
characteristics.characteristic: feature
characteristics.text: Level 2: High-Quality Draft128x;;70
characteristics.characteristic: finishing strategy (depth of coverage)
characteristics.text: not determined
characteristics.characteristic: geo loc name
characteristics.text: 9606
characteristics.characteristic: host taxid
characteristics.text: not determined
characteristics.characteristic: isol_growth_condt
characteristics.text: not determined
characteristics.characteristic: lat lon
characteristics.text: biological product [ENVO:02000043]
characteristics.characteristic: material
characteristics.text: Vaginal
characteristics.characteristic: misc_param: HMP body site
characteristics.text: urogenital_tract
characteristics.characteristic: misc_param: HMP supersite
characteristics.text: not determined
characteristics.characteristic: nucleic acid extraction
characteristics.text: not determined
characteristics.characteristic: num_replicons
characteristics.text: Lactobacillus gasseri 202-4
characteristics.ontologyTerms: http://purl.obolibrary.org/obo/NCBITaxon_630527
characteristics.characteristic: organism
characteristics.text: Lactobacillus gasseri 202-4
characteristics.characteristic: project name
characteristics.text: Reference Genome
characteristics.characteristic: project_type
characteristics.text: not determined
characteristics.characteristic: ref_biomaterial
characteristics.text: 454
characteristics.characteristic: sequencing method
characteristics.text: http://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
characteristics.characteristic: sop
characteristics.text: BEI HM-801
characteristics.characteristic: source_mat_id
characteristics.text: Homo sapiens
characteristics.ontologyTerms: http://purl.obolibrary.org/obo/NCBITaxon_9606
characteristics.characteristic: specific host
characteristics.text: 202-4
characteristics.characteristic: strain
characteristics.text: MIGS Cultured Bacterial/Archaeal sample from Lactobacillus gasseri 202-4
characteristics.characteristic: title