characteristics.text: SAMN00005984
characteristics.characteristic: External Id
characteristics.text: Institute of Molecular Biology University of Zurich
characteristics.characteristic: INSDC center name
characteristics.text: 2011-02-17T15:49:46.117Z
characteristics.characteristic: INSDC first public
characteristics.text: 2013-06-12T08:52:06.043Z
characteristics.characteristic: INSDC last update
characteristics.text: SRS008091
characteristics.characteristic: INSDC secondary accession
characteristics.text: live
characteristics.characteristic: INSDC status
characteristics.text: Generic
characteristics.characteristic: NCBI submission model
characteristics.text: Generic.1.0
characteristics.characteristic: NCBI submission package
characteristics.text: SRS008091
characteristics.characteristic: SRA accession
characteristics.text: pool sample: Non-typhoidal Salmonella infections are a major cause of diarrhea. Acute symptoms cease rapidly, but some patients keep shedding NTS for weeks or months - representing subclinical carriers and transmitters. The factors preventing this 'asymptomatic excretor' state are poorly understood, but of high clinical and epidemiological importance. Here, we analyzed the parameters controlling clearance of an acute NTS infection in mice. BARCODE_INDEX = {1:TAGC, 2:TCGA, 3:TCGC, 4:TAGA, 5:TGCA, 6:ATCG, 7:AGCT, 8:AGCG, 9:ATCT, 10:ACGT, 11:GATC, 12:GCTA, 13:GCTC, 14:GATA, 15:GTCA, 16:CAGT, 17:CTGA, 18:CAGA, 19:CTGT, 20:CGTA} REGION_1 = {1:Input_RK69, 2:Pellet_RK69, 3:Donor_I_TV1012_CON, 4:Beads_RK69, 5:Eluat_Reg_RK69, 6:Beads_RK69, 7:Eluat_Reg_RK69, 8:US_RK75, 9:B727-1_CON, 10:B728-1_CON, 11:B729-1_CON, 12:B730-1_CON, 13:B731-1_CON, 14:B732-1_CON, 15:FB727-Day_1_BSA, 16:FB728-Day_1_BSA, 17:FB729-Day_1_BSA, 18:FB730-Day_1_RegIIIbeta, 19:FB731-Day_1_RegIIIbeta, 20:FB732-Day_1_RegIIIbeta} REGION_2 = {1:Donor_1_TV973_C_donor_day_0, 2:Donor_TV973_C_donor_day_83, 3:B896_TV973_L-C_day_80, 4:B897_TV973_L-C_day_80, 5:B899_TV973_L-C_day_80, 6:B900_TV973_L-C_day_80, 7:B902_TV973_L-C_day_80, 8:B903_TV973_L-C_day_80, 9:B905_TV973_L_day_80, 10:B906_TV973_L_day_80, 11:B907_TV973_L_day_80, 12:B908_TV973_L_day_80, 13:B208_day_2_TV907_L_day_2, 14:B209_day_2_TV907_L_day_2, 15:B210_day_2_TV907_L_day_2, 16:B211_day_2_TV907_L_day_2, 17:B213_day_40_TV907_L_day_40, 18:B214_day_40_TV907_L_day_40, 19:B214_day_40_TV907_L_day_40, 20:B214_day_40_TV907_L_day_40}
characteristics.characteristic: description
characteristics.text: mouse gut metagenome
characteristics.ontologyTerms: http://purl.obolibrary.org/obo/NCBITaxon_410661
characteristics.characteristic: organism
characteristics.text: Generic sample from mouse gut metagenome
characteristics.characteristic: title