characteristics.text: SAMN00166316
characteristics.characteristic: External Id
characteristics.text: LIBEST_023151
characteristics.characteristic: External Id
characteristics.text: DOE Joint Genome Institute
characteristics.characteristic: INSDC center name
characteristics.text: 2008-05-21T00:00:00Z
characteristics.characteristic: INSDC first public
characteristics.text: 2017-10-11T17:46:05.950Z
characteristics.characteristic: INSDC last update
characteristics.text: live
characteristics.characteristic: INSDC status
characteristics.text: Generic
characteristics.characteristic: NCBI submission model
characteristics.text: Generic.1.0
characteristics.characteristic: NCBI submission package
characteristics.text: In Vivo Conditions: mycelium in contact with roots of cotton and maize. The library was made from oligo(dT) primed cDNA and cloned into the pCMV-SPORT6 vector (Invitrogen Corp., Carlsbad, CA). PolyA RNA was primed with an oligo dT primer (5'-GACTAGTTCTAGATCGCGAGCGGCCGCCCTTTTTTTTTTTTTTT-3'), ligated to a SalI adapter (5'-TCGACCCACGCGTCCG and 5'- CGGACGCGTGGG) and digested with NotI. cDNA was size selected >2kb using 1.1% agarose gel electrophoresis then ligated into NotI and SalI-digested pCMV-SPORT6 vector. RNA was obtained from C. Kenerley (Texas A&M University, College Station, TX) and the library was constructed and sequenced at the DOE Joint Genome Institute (Walnut Creek, CA).
characteristics.characteristic: description
characteristics.text: fungal mycelium 12-48 hrs incubation
characteristics.characteristic: dev-stage
characteristics.text: DH10B T1 resistant
characteristics.characteristic: lab-host
characteristics.text: Trichoderma virens
characteristics.ontologyTerms: http://purl.obolibrary.org/obo/NCBITaxon_29875
characteristics.characteristic: organism
characteristics.text: SalI
characteristics.characteristic: re_1
characteristics.text: NotI
characteristics.characteristic: re_2
characteristics.text: asexual
characteristics.characteristic: sex
characteristics.text: Gv29-8
characteristics.characteristic: strain
characteristics.text: fungal mycelium
characteristics.characteristic: tissue-type
characteristics.text: CBHB Trichoderma virens strain Gv29-8 fungal mycelium
characteristics.characteristic: title
characteristics.text: pCMV-SPORT6
characteristics.characteristic: vector