SAMD00013249
External Id
Institute of Soil, Water and Environmental Sciences , The Volcani Center, Agricultural Research Organization
INSDC center name
2016-08-31T22:00:57Z
INSDC first public
2016-08-31T09:00:57Z
INSDC last update
DRS013327
INSDC secondary accession
live
INSDC status
Generic
NCBI submission model
Generic.1.0
NCBI submission package
DRS013327
SRA accession
rhizosphere metagenome
http://purl.obolibrary.org/obo/NCBITaxon_939928
organism
We monitored succession of tomato plant root-associated bacteria during plant development. We sampled four independent replicates of bacterial communities at four time points during plant development which were grown under two treatment conditions. To determine the effect of plant age and treatments on the diversity and composition of root associated bacterial communities we applied a high-throughput sequencing-based protocol that targets PCR-generated amplicons from the variable regions V4-V5 of the 16S rRNA gene using the bacterial primer set 515F/806R. Single end fastq file contains 32 libraries was produced as a result of Illumina HiSeq 2000 sequencing
sample comment
DRS013327
sample name
Succession of plant root-associated bacteria during plant development
title