SAMN02116470
External Id
Cornell University
INSDC center name
2013-05-03T12:29:24.787Z
INSDC first public
2013-05-06T14:10:15.610Z
INSDC last update
SRS418820
INSDC secondary accession
live
INSDC status
Generic
NCBI submission model
Generic.1.0
NCBI submission package
SRS418820
SRA accession
This sample is a Genotyping-by-sequencing library with pooled individuals as described in http://www.maizegenetics.net/Table/Genotyping-By-Sequencing/. The restriction enzyme used for this library is ApeKI. Mapping between GBS barcodes and samples: (AGGC,MARS-WEMA_270891;TCAAGTT,MARS-WEMA_270987;ATGACGC,MARS-WEMA_271082;CGCTTGAA,MARS-WEMA_271177;GATT,MARS-WEMA_270899;GATCATA,Blank;TATTGCA,MARS-WEMA_271090;ATCGGTGT,MARS-WEMA_271185;CGAA,MARS-WEMA_270907;GCATTGA,MARS-WEMA_271002;GGATATC,Blank;CCTACCGA,MARS-WEMA_271193;GTCC,Blank;CAGGTAT,MARS-WEMA_271010;CCGAGCT,MARS-WEMA_271105;GGACAATA,MARS-WEMA_271201;ACAT,MARS-WEMA_270923;TGCAATA,MARS-WEMA_271018;TTGATAC,MARS-WEMA_271113;AACGGAAT,MARS-WEMA_271209;GCGA,MARS-WEMA_270931;ATATCGT,MARS-WEMA_271026;CACGACT,MARS-WEMA_271121;TCGATGGT,MARS-WEMA_271217;TGCT,MARS-WEMA_270939;AGTCTAT,MARS-WEMA_271034;ATCTAGC,MARS-WEMA_271129;GTTCATTA,MARS-WEMA_271225;CCTC,MARS-WEMA_270947;GTCTGAA,MARS-WEMA_271042;TGAATTC,MARS-WEMA_271137;GAATCGAA,MARS-WEMA_271233;AACA,MARS-WEMA_270955;ATCAGTT,MARS-WEMA_271050;CGGCTCA,MARS-WEMA_271145;CATGGTGT,MARS-WEMA_271240;CTGT,MARS-WEMA_270963;CAGTTGA,MARS-WEMA_271058;GGTACAC,MARS-WEMA_271153;TGGCTATT,MARS-WEMA_271248;TAAC,MARS-WEMA_270971;TGTGCAA,MARS-WEMA_271066;AATGTCT,MARS-WEMA_271161;ACCACCGT,MARS-WEMA_271256;CTCGA,MARS-WEMA_270979;CGACAGT,MARS-WEMA_271074;TCATGAC,MARS-WEMA_271169;CTATGTAA,MARS-WEMA_271264;ACCGT,MARS-WEMA_270892;ACGTGTA,MARS-WEMA_270988;TTCGGAC,MARS-WEMA_271083;AACGAGTA,MARS-WEMA_271178;CGTCA,MARS-WEMA_270900;GATGCAT,MARS-WEMA_270995;GCTTAGC,MARS-WEMA_271091;CCGACCAT,MARS-WEMA_271186;TCGCA,MARS-WEMA_270908;CTAATGT,MARS-WEMA_271003;ACTGCCA,MARS-WEMA_271098;TGTCTTAA,MARS-WEMA_271194;CGCAT,MARS-WEMA_270916;GTCGATA,MARS-WEMA_271011;TAGTACT,MARS-WEMA_271106;GTATACTA,MARS-WEMA_271202;GCACT,MARS-WEMA_270924;TATACGT,MARS-WEMA_271019;GACACTC,MARS-WEMA_271114;TGTGCAGT,MARS-WEMA_271210;AGCTA,MARS-WEMA_270932;GCGTAAT,MARS-WEMA_271027;CGAGTAC,MARS-WEMA_271122;ATGCTGGT,MARS-WEMA_271218;CAGCT,MARS-WEMA_270940;AGCGTTA,MARS-WEMA_271035;ATATGTC,MARS-WEMA_271130;GCAAGTAA,MARS-WEMA_271226;TCAGC,MARS-WEMA_270948;ATCCGGA,MARS-WEMA_271043;TGGACCT,MARS-WEMA_271138;CAGGAATA,MARS-WEMA_271234;CATGC,MARS-WEMA_270956;TCAGTAT,MARS-WEMA_271051;CATATGC,MARS-WEMA_271146;GTCTGGAT,MARS-WEMA_271241;GCTAC,MARS-WEMA_270964;CAATGTT,MARS-WEMA_271059;TTCGCCA,MARS-WEMA_271154;CACCACGT,MARS-WEMA_271249;CTGAC,MARS-WEMA_270972;GTTACGA,MARS-WEMA_271067;AGTTACT,MARS-WEMA_271162;TCATTGTA,MARS-WEMA_271257;GACTC,MARS-WEMA_270980;TGCATAT,MARS-WEMA_271075;GTGCCAC,MARS-WEMA_271170;GGTTCATT,MARS-WEMA_271265;ACGTC,MARS-WEMA_270893;CAGCGTA,MARS-WEMA_270989;ACCGGTC,MARS-WEMA_271084;AAGATCGA,MARS-WEMA_271179;CGATC,MARS-WEMA_270901;AGTTCGA,MARS-WEMA_270996;CGGTAGC,MARS-WEMA_271092;CGAAGAAT,MARS-WEMA_271187;ATGCGT,MARS-WEMA_270909;GCTAATT,MARS-WEMA_271004;GCAGTTC,MARS-WEMA_271099;TCTGATTA,MARS-WEMA_271195;TCCAGT,MARS-WEMA_270917;ACGCTGA,MARS-WEMA_271012;TATAGTC,MARS-WEMA_271107;ATCTCTGA,MARS-WEMA_271203;GCTTGA,MARS-WEMA_270925;TAAGCTT,MARS-WEMA_271020;ACTCCGC,MARS-WEMA_271115;AAGCAGAT,MARS-WEMA_271211;TCCGTA,MARS-WEMA_270933;CTTAGAT,MARS-WEMA_271028;GTATTAC,MARS-WEMA_271123;TGCGGATT,MARS-WEMA_271219;TCGGAT,MARS-WEMA_270941;TGATACA,MARS-WEMA_271036;TGAGCGC,MARS-WEMA_271131;CTCCTCGA,MARS-WEMA_271227;GTCTTA,MARS-WEMA_270949;ACCGAGT,MARS-WEMA_271044;GAGTCGC,MARS-WEMA_271139;GGTACTAT,MARS-WEMA_271235;CGGAGT,MARS-WEMA_270957;GTACTTA,MARS-WEMA_271052;ATTGATC,MARS-WEMA_271147;ACAGGATA,MARS-WEMA_271242;CGTCTA,MARS-WEMA_270965;ATGTCAA,MARS-WEMA_271060;TCCACGC,MARS-WEMA_271155;GATCTGGT,MARS-WEMA_271250;CACGTT,MARS-WEMA_270973;CACAGGT,MARS-WEMA_271068;GTTATTC,MARS-WEMA_271163;CTGAAGAA,MARS-WEMA_271258;GTTAGC,MARS-WEMA_270981;GGTGGCA,MARS-WEMA_271076;ATGCACC,MARS-WEMA_271171;TCCGCCAA,MARS-WEMA_271266;AGCATT,MARS-WEMA_270894;CTGAATT,MARS-WEMA_270990;TATGTAC,MARS-WEMA_271085;ATATTCGT,MARS-WEMA_271180;CTCCGA,MARS-WEMA_270902;TCGTTAA,MARS-WEMA_270997;AGACAAGT,MARS-WEMA_271093;CGGTGATT,MARS-WEMA_271188;TTGGCA,MARS-WEMA_270910;TGATCAT,MARS-WEMA_271005;GGCCGAGT,MARS-WEMA_271100;TATGCTGA,MARS-WEMA_271196;CCACGT,MARS-WEMA_270918;CGTCGGA,MARS-WEMA_271013;AACAAGGT,MARS-WEMA_271108;GAACAGTT,MARS-WEMA_271204;GATGTC,MARS-WEMA_270926;GACTATT,MARS-WEMA_271021;TAACGAGA,MARS-WEMA_271116;ACGATTAA,MARS-WEMA_271212;TGTTAC,MARS-WEMA_270934;TAGGTCA,MARS-WEMA_271029;ATACAGGA,MARS-WEMA_271124;GGTTACGT,MARS-WEMA_271220;CAGTTA,MARS-WEMA_270942;GCAACGT,MARS-WEMA_271037;CACAGAGT,MARS-WEMA_271132;TTACGGTA,MARS-WEMA_271228;GCCTAT,MARS-WEMA_270950;ACTTGAT,MARS-WEMA_271045;CGGCAGGT,MARS-WEMA_271140;CACGCCAT,MARS-WEMA_271236;AGTGGC,MARS-WEMA_270958;TCTGATA,MARS-WEMA_271053;GCGCGTGA,MARS-WEMA_271148;TCGAGATA,MARS-WEMA_271243;TGACCT,MARS-WEMA_270966;ATAGTCA,MARS-WEMA_271061;ACAATGGA,MARS-WEMA_271156;AGAACTGA,MARS-WEMA_271251;TTGCAC,MARS-WEMA_270974;TAGCCAT,MARS-WEMA_271069;ACAAGAGT,MARS-WEMA_271164;GTTCTAAT,MARS-WEMA_271259;CTAGCT,MARS-WEMA_270982;AGGAGTC,MARS-WEMA_271077;GAACATGA,MARS-WEMA_271172;CCTTAGAA,MARS-WEMA_271267;TAGTGC,MARS-WEMA_270895;GTAGAGC,MARS-WEMA_270991;CAAGAAGT,MARS-WEMA_271086;GACTGTGT,MARS-WEMA_271181;GTTCCA,MARS-WEMA_270903;GACCTAT,MARS-WEMA_270998;GTCATGGT,MARS-WEMA_271094;CGCGCCTA,MARS-WEMA_271189;TGAATC,MARS-WEMA_270911;CATTAGT,MARS-WEMA_271006;AACAGTGA,MARS-WEMA_271101;TTGCATAT,MARS-WEMA_271197;CGCCAT,MARS-WEMA_270919;ATTAGCA,MARS-WEMA_271014;GTGCAAGA,MARS-WEMA_271109;GCTATAGA,MARS-WEMA_271205;ATCGTC,MARS-WEMA_270927;GAATCTA,MARS-WEMA_271022;CAATAGGA,MARS-WEMA_271117;ACAGCCTT,MARS-WEMA_271213;GTCACT,MARS-WEMA_270935;TGTCATT,MARS-WEMA_271030;TGCAGTGT,MARS-WEMA_271125;CTGTGGTA,MARS-WEMA_271221;CATCGC,MARS-WEMA_270943;GCCAGAT,MARS-WEMA_271038;AGGCTAGA,MARS-WEMA_271133;TGCTTAAT,MARS-WEMA_271229;AGGTCT,MARS-WEMA_270951;CCAGGTA,MARS-WEMA_271046;CTAGTGGT,MARS-WEMA_271141;AATGACGA,MARS-WEMA_271237;CCTGCA,MARS-WEMA_270959;TGGCAAC,MARS-WEMA_271054;GCTAGTGT,MARS-WEMA_271149;AGAACGAT,MARS-WEMA_271244;GTACTC,MARS-WEMA_270967;ATGATCT,MARS-WEMA_271062;GCTGCGGA,MARS-WEMA_271157;GTGCGATT,MARS-WEMA_271252;ACCTGC,MARS-WEMA_270975;CATGTTA,MARS-WEMA_271070;TCGCAAGT,MARS-WEMA_271165;CTAATTGA,MARS-WEMA_271260;CTTGAC,MARS-WEMA_270983;TGTAAGC,MARS-WEMA_271078;CGATGTGT,MARS-WEMA_271173;TAGCAGTA,MARS-WEMA_271268;ACCGCT,MARS-WEMA_270896;ACGGCAT,MARS-WEMA_270992;AACGTAGA,MARS-WEMA_271087;TCCGATAT,MARS-WEMA_271182;GCTCAC,MARS-WEMA_270904;TTCTTGA,MARS-WEMA_270999;CTCACGGA,MARS-WEMA_271095;GCCTCCGA,MARS-WEMA_271190;CTATGC,MARS-WEMA_270912;GGACCTT,MARS-WEMA_271007;TAGCGTGT,MARS-WEMA_271102;AGTCGTGT,MARS-WEMA_271198;CAGCCT,MARS-WEMA_270920;GTGTACA,MARS-WEMA_271015;ACGTAAGA,MARS-WEMA_271110;CATGTATT,MARS-WEMA_271206;GCCATC,MARS-WEMA_270928;TAGCGGC,MARS-WEMA_271023;CGTATGGT,MARS-WEMA_271118;TGAAGCAA,MARS-WEMA_271214;CGCTCA,MARS-WEMA_270936;CGCTTAA,MARS-WEMA_271031;GTACGTGT,MARS-WEMA_271126;GCATTGGT,MARS-WEMA_271222;ACGCTC,MARS-WEMA_270944;GATAGCT,MARS-WEMA_271039;TTCGAAGA,MARS-WEMA_271134;AAGCGATA,MARS-WEMA_271230;CTGATC,MARS-WEMA_270952;AGAGCCT,MARS-WEMA_271047;AATACGGA,MARS-WEMA_271142;GTCAATAT,MARS-WEMA_271238;CCAGTC,MARS-WEMA_270960;TACGAGC,MARS-WEMA_271055;TGACTGGT,MARS-WEMA_271150;CGGCCGTA,MARS-WEMA_271245;TACGCC,MARS-WEMA_270968;TTGACTA,MARS-WEMA_271063;GCGGATGT,MARS-WEMA_271158;TTAGTCGA,MARS-WEMA_271253;CCGTAC,MARS-WEMA_270976;CGCCGAT,MARS-WEMA_271071;CATTGAGA,MARS-WEMA_271166;GACTCAAT,MARS-WEMA_271261;TCGACC,MARS-WEMA_270984;AATTGGC,MARS-WEMA_271079;GTAACAGA,MARS-WEMA_271174;ACTAGGAA,MARS-WEMA_271269;GCATCC,MARS-WEMA_270897;ATACTGC,MARS-WEMA_270993;AGCTTGGT,MARS-WEMA_271088;CGCAACTT,MARS-WEMA_271183;CGTACC,MARS-WEMA_270905;GCGGCTA,MARS-WEMA_271000;ACAGATGA,MARS-WEMA_271096;TCGGTTGA,MARS-WEMA_271191;ATTCAGT,MARS-WEMA_270913;CGTTATA,MARS-WEMA_271008;CAGTTGGT,MARS-WEMA_271103;AATTCTGT,MARS-WEMA_271199;TATCTGA,MARS-WEMA_270921;TTAGACT,MARS-WEMA_271016;TGCAAGAA,MARS-WEMA_271111;CTAGAGTA,MARS-WEMA_271207;TTCAAGT,MARS-WEMA_270929;AGGTTAC,MARS-WEMA_271024;ACTCGAGA,MARS-WEMA_271119;GCGCGCAT,MARS-WEMA_271215;GAGCAGT,MARS-WEMA_270937;GGCAACT,MARS-WEMA_271032;GGAGCTGT,MARS-WEMA_271127;CGATTAGA,MARS-WEMA_271223;TCTAGGA,MARS-WEMA_270945;TCACCGA,MARS-WEMA_271040;CTGAGTGT,MARS-WEMA_271135;ATTCAGTT,MARS-WEMA_271231;ACACGGT,MARS-WEMA_270953;AAGGTTC,MARS-WEMA_271048;GATCAGAA,MARS-WEMA_271143;TTGACAAT,MARS-WEMA_271239;GACGTGA,MARS-WEMA_270961;CTAGCAT,MARS-WEMA_271056;TGCATAGA,MARS-WEMA_271151;TACGTTAA,MARS-WEMA_271246;TCATAGT,MARS-WEMA_270969;AGCTGCA,MARS-WEMA_271064;GAACGAAT,MARS-WEMA_271159;AGATACGA,MARS-WEMA_271254;TTACGAT,MARS-WEMA_270977;AGTACTT,MARS-WEMA_271072;TTGGCGGA,MARS-WEMA_271167;GCTGGATT,MARS-WEMA_271262;GGCTAGA,MARS-WEMA_270985;TAATTGC,MARS-WEMA_271080;CGCCGCAT,MARS-WEMA_271175;GACACCTT,MARS-WEMA_271270;AATCGTT,MARS-WEMA_270898;GCTGGAC,MARS-WEMA_270994;ACGTGTGT,MARS-WEMA_271089;CCGCCTAA,MARS-WEMA_271184;CTATGGA,MARS-WEMA_270906;GTCATCA,MARS-WEMA_271001;CAAGTGAA,MARS-WEMA_271097;TTCTTGGA,MARS-WEMA_271192;TACGGTA,MARS-WEMA_270914;CAGTGAC,MARS-WEMA_271009;GTTAACGA,MARS-WEMA_271104;CAACGCTT,MARS-WEMA_271200;ACTATGT,MARS-WEMA_270922;GCACACT,MARS-WEMA_271017;TCGTGGAT,MARS-WEMA_271112;AGCAGATA,MARS-WEMA_271208;CGTGAAT,MARS-WEMA_270930;AAGTCTT,MARS-WEMA_271025;AGCGATAA,MARS-WEMA_271120;TCTTAGGT,MARS-WEMA_271216;TTGCAGA,MARS-WEMA_270938;TGTATCA,MARS-WEMA_271033;CCACCAGT,MARS-WEMA_271128;GTGGCTAT,MARS-WEMA_271224;AACTTGT,MARS-WEMA_270946;CTGGAAC,MARS-WEMA_271041;GGCGTGTA,MARS-WEMA_271136;AGACTGAA,MARS-WEMA_271232;TGACGTA,MARS-WEMA_270954;ATTCGAC,MARS-WEMA_271049;AAGACAGT,MARS-WEMA_271144;CATAATGA,Blank;GCTATAA,MARS-WEMA_270962;CAAGATC,MARS-WEMA_271057;TTGTGCGA,MARS-WEMA_271152;GTGTCAGT,MARS-WEMA_271247;ATCGTAT,MARS-WEMA_270970;TCGCGCA,MARS-WEMA_271065;GAAGACAT,MARS-WEMA_271160;AGTGGCTT,MARS-WEMA_271255;TACTGAT,MARS-WEMA_270978;AGTGTGC,MARS-WEMA_271073;TGTCAAGA,MARS-WEMA_271168;CCACTGCA,MARS-WEMA_271263;CTTGAGA,MARS-WEMA_270986;GAATTCT,MARS-WEMA_271081;GCGAGGTT,MARS-WEMA_271176;TACAGGAT,MARS-WEMA_271271;)
description
Zea mays
http://purl.obolibrary.org/obo/NCBITaxon_4577
organism
pooled
http://www.ebi.ac.uk/efo/EFO_0000663
strain
Generic sample from Zea mays
title