SAMN02086299
External Id
Cornell University
INSDC center name
2013-04-30T11:26:36.710Z
INSDC first public
2013-04-30T22:21:13.980Z
INSDC last update
SRS417520
INSDC secondary accession
live
INSDC status
Generic
NCBI submission model
Generic.1.0
NCBI submission package
SRS417520
SRA accession
This sample is a Genotyping-by-sequencing library with pooled individuals as described in http://www.maizegenetics.net/Table/Genotyping-By-Sequencing/. The restriction enzyme used for this library is ApeKI. Mapping between GBS barcodes and samples: (CTCC,NSL29282;TGCA,PI601009;ACTA,Ames27057;CAGA,PI639926;AACT,Ames24750;GCGT,PI343952;TGCGA,CML52;CGAT,CML5;CGCTT,Pa880;TCACC,HP301;CTAGC,TIL01;ACAAA,TIL09;TTCTC,Ames26758;AGCCC,PI639936;GTATT,PI593010;CTGTA,NSL22984;ACCGT,PI538239;GTAA,Ames20191;GGTTGT,CML333;CCAGCT,NC358;TTCAGA,Oh43;TAGGAA,OH7B;GCTCTA,TIL02;CCACAA,TIL10;GCTTA,NSL30866;CTTCCA,PI639939;GAGATA,PI200193;ATGCCT,Ames22750;TATTTTT,PI391676;CTTGCTT,blank;ATGAAAC,Ki11;AAAAGTT,N7A;GAATTCA,M37W;GAACTTC,Ki3;GGACCTA,TIL03;GTCGATT,TIL11;AACGCCT,CML490;AATATGC,PI639941;ACGACTAC,Tx204;GGTGT,PI200182;TAGCATGC,PI340861;AGTGGA,CML228;TAGGCCAT,Ky21;TGCAAGGA,Il14H;TGGTACGT,B73;TCTCAGTC,CML247;CCGGATAT,TIL04;CGCCTTAT,TIL12;AGGC,NSL43597;GATC,PI601430;TCAC,MR25_(Poropo)_S5 ;AGGAT,PI601322;ATTGA,NSL67790;CATCT,B103;CCTAC,Mo18W;GAGGA,CML69;GGAAC,M162W;GTCAA,Mp339;TAATA,TIL05;TACAT,TIL14;TCGTT,CML230;ACCTAA,Ames24720;ATATGT,NSL437899;ATCGTA,PI405705;CATCGT,PI198901;CGCGGT,CML277;CTATTA,CML103;GCCAGT,Mo17;GGAAGA,P39;GTACTT,EP42;GTTGAA,TIL06;TAACGA,TIL15;TGGCTA,PI594064;ACGTGTT,PI606769;ATTAATT,Ames26808;ATTGGAT,PI533658;CATAAGT,PI601573;CGCTGAT,W22;CGGTAGA,Tx303;CTACGGA,NC350;GCGGAAT,IA2132;TAGCGGA,Ames19311;TCGAAGA,TIL07;TCTGTGA,TIL16;TGCTGGA,PI601787;AACCGAGA,PI539871;ACAGGGAA,PI540751;ACGTGGTA,PI340829;CCATGGGT,PI233314;CGCGGAGA,B97;CGTGTGGT,MS71;GCTGTGGA,Tzi8;GGATTGGT,CML322;GTGAGGGT,EP39;TATCGGGA,TIL08;TTCCTGGA,TIL17;CTCC,NSL29282;TGCA,PI601009;ACTA,Ames27057;CAGA,PI639926;AACT,Ames24750;GCGT,PI343952;TGCGA,CML52;CGAT,CML5;CGCTT,Pa880;TCACC,HP301;CTAGC,TIL01;ACAAA,TIL09;TTCTC,Ames26758;AGCCC,PI639936;GTATT,PI593010;CTGTA,NSL22984;ACCGT,PI538239;GTAA,Ames20191;GGTTGT,CML333;CCAGCT,NC358;TTCAGA,Oh43;TAGGAA,OH7B;GCTCTA,TIL02;CCACAA,TIL10;GCTTA,NSL30866;CTTCCA,PI639939;GAGATA,PI200193;ATGCCT,Ames22750;TATTTTT,PI391676;CTTGCTT,blank;ATGAAAC,Ki11;AAAAGTT,N7A;GAATTCA,M37W;GAACTTC,Ki3;GGACCTA,TIL03;GTCGATT,TIL11;AACGCCT,CML490;AATATGC,PI639941;ACGACTAC,Tx204;GGTGT,PI200182;TAGCATGC,PI340861;AGTGGA,CML228;TAGGCCAT,Ky21;TGCAAGGA,Il14H;TGGTACGT,B73;TCTCAGTC,CML247;CCGGATAT,TIL04;CGCCTTAT,TIL12;AGGC,NSL43597;GATC,PI601430;TCAC,MR25_(Poropo)_S5 ;AGGAT,PI601322;ATTGA,NSL67790;CATCT,B103;CCTAC,Mo18W;GAGGA,CML69;GGAAC,M162W;GTCAA,Mp339;TAATA,TIL05;TACAT,TIL14;TCGTT,CML230;ACCTAA,Ames24720;ATATGT,NSL437899;ATCGTA,PI405705;CATCGT,PI198901;CGCGGT,CML277;CTATTA,CML103;GCCAGT,Mo17;GGAAGA,P39;GTACTT,EP42;GTTGAA,TIL06;TAACGA,TIL15;TGGCTA,PI594064;ACGTGTT,PI606769;ATTAATT,Ames26808;ATTGGAT,PI533658;CATAAGT,PI601573;CGCTGAT,W22;CGGTAGA,Tx303;CTACGGA,NC350;GCGGAAT,IA2132;TAGCGGA,Ames19311;TCGAAGA,TIL07;TCTGTGA,TIL16;TGCTGGA,PI601787;AACCGAGA,PI539871;ACAGGGAA,PI540751;ACGTGGTA,PI340829;CCATGGGT,PI233314;CGCGGAGA,B97;CGTGTGGT,MS71;GCTGTGGA,Tzi8;GGATTGGT,CML322;GTGAGGGT,EP39;TATCGGGA,TIL08;TTCCTGGA,TIL17;)
description
Zea mays
http://purl.obolibrary.org/obo/NCBITaxon_4577
organism
pooled
http://www.ebi.ac.uk/efo/EFO_0000663
strain
Generic sample from Zea mays
title