SAMN02116941
External Id
Cornell University
INSDC center name
2013-05-03T12:23:50.500Z
INSDC first public
2013-05-05T22:49:14.240Z
INSDC last update
SRS418511
INSDC secondary accession
live
INSDC status
Generic
NCBI submission model
Generic.1.0
NCBI submission package
SRS418511
SRA accession
This sample is a Genotyping-by-sequencing library with pooled individuals as described in http://www.maizegenetics.net/Table/Genotyping-By-Sequencing/. The restriction enzyme used for this library is ApeKI. Mapping between GBS barcodes and samples: (CTCC,1018;TGCA,1126;ACTA,2174;CAGA,2069;AACT,1146;GCGT,2178;TGCGA,1020;CGAT,2038;CGCTT,2083;TCACC,2051;CTAGC,SWG32.01;ACAAA,SW795.10;TTCTC,1026;AGCCC,1145;GTATT,1031;CTGTA,Blank;ACCGT,2077;GTAA,2171;GGTTGT,1141;CCAGCT,1136;TTCAGA,2057;TAGGAA,2062;GCTCTA,SW102.07;CCACAA,SW789.09;GCTTA,2078;CTTCCA,1157;GAGATA,2168;ATGCCT,1006;TATTTTT,2049;CTTGCTT,2163;ATGAAAC,1156;AAAAGTT,2020;GAATTCA,2091;GAACTTC,1130;GGACCTA,ECS-1.02;GTCGATT,SW796.03;AACGCCT,2040;AATATGC,2074;ACGACTAC,2150;GGTGT,1153;TAGCATGC,2071;AGTGGA,2173;TAGGCCAT,1003;TGCAAGGA,2024;TGGTACGT,1154;TCTCAGTC,2175;CCGGATAT,WS98-SB.02;CGCCTTAT,SW796.07;AGGC,2047;GATC,2081;TCAC,2059;AGGAT,2037;ATTGA,2056;CATCT,2153;CCTAC,1010;GAGGA,2046;GGAAC,1160;GTCAA,2031;TAATA,ECS-10.05;TACAT,ECS-6.01;TCGTT,1019;ACCTAA,1129;ATATGT,1002;ATCGTA,1009;CATCGT,2065;CGCGGT,2158;CTATTA,1032;GCCAGT,1150;GGAAGA,1013;GTACTT,SW790.04;GTTGAA,SW803.10;TAACGA,SW116.06;TGGCTA,2028;ACGTGTT,2042;ATTAATT,1022;ATTGGAT,2170;CATAAGT,1148;CGCTGAT,2086;CGGTAGA,1140;CTACGGA,2080;GCGGAAT,1040;TAGCGGA,High_Tide.06;TCGAAGA,ECS-10.04;TCTGTGA,SW805.10;TGCTGGA,1158;AACCGAGA,1024;ACAGGGAA,1008;ACGTGGTA,1152;CCATGGGT,1033;CGCGGAGA,1011;CGTGTGGT,1030;GCTGTGGA,2064;GGATTGGT,2179;GTGAGGGT,SW49.02;TATCGGGA,Timber.02;TTCCTGGA,SW51.05;)
description
Panicum virgatum
http://purl.obolibrary.org/obo/NCBITaxon_38727
organism
pooled
http://www.ebi.ac.uk/efo/EFO_0000663
strain
Generic sample from Panicum virgatum
title