SAMN02116942
External Id
Cornell University
INSDC center name
2013-05-03T12:23:50.763Z
INSDC first public
2013-05-05T22:49:14.930Z
INSDC last update
SRS418513
INSDC secondary accession
live
INSDC status
Generic
NCBI submission model
Generic.1.0
NCBI submission package
SRS418513
SRA accession
This sample is a Genotyping-by-sequencing library with pooled individuals as described in http://www.maizegenetics.net/Table/Genotyping-By-Sequencing/. The restriction enzyme used for this library is ApeKI. Mapping between GBS barcodes and samples: (CTCC,1123;TGCA,2068;ACTA,2087;CAGA,2036;AACT,2154;GCGT,1045;TGCGA,SW122.04;CGAT,SW114.05;CGCTT,Timber.10;TCACC,WS98-SB.04;CTAGC,SW796.09;ACAAA,SWG32.10;TTCTC,1012;AGCCC,2041;GTATT,1034;CTGTA,1135;ACCGT,1139;GTAA,1028;GGTTGT,SW799.09;CCAGCT,SW798.01;TTCAGA,WS4U.06;TAGGAA,SW795.02;GCTCTA,SW116.09;CCACAA,SW802.01;GCTTA,2026;CTTCCA,1001;GAGATA,2092;ATGCCT,1133;TATTTTT,blank;CTTGCTT,1004;ATGAAAC,WS98-SB.01;AAAAGTT,SW128.04;GAATTCA,ECS-6.03;GAACTTC,SW40.06;GGACCTA,SW788.05;GTCGATT,SW112.02;AACGCCT,1035;AATATGC,2161;ACGACTAC,2151;GGTGT,2097;TAGCATGC,2072;AGTGGA,Kanlow.09;TAGGCCAT,SW127.03;TGCAAGGA,KY1625.10;TGGTACGT,SW796.01;TCTCAGTC,SW33.01;CCGGATAT,SW123.03;CGCCTTAT,SW786.04;AGGC,2145;GATC,2066;TCAC,2030;AGGAT,1127;ATTGA,2089;CATCT,SW58.06;CCTAC,Sunburst.10;GAGGA,Kanlow.10;GGAAC,Dacotah.08;GTCAA,ECS-12.05;TAATA,SW102.03;TACAT,SW128.10;TCGTT,2023;ACCTAA,2076;ATATGT,1015;ATCGTA,1025;CATCGT,2025;CGCGGT,SW787.05;CTATTA,SW790.06;GCCAGT,SW805.03;GGAAGA,SW789.05;GTACTT,SW809.04;GTTGAA,SW114.08;TAACGA,WS98-SB.07;TGGCTA,1138;ACGTGTT,2140;ATTAATT,1007;ATTGGAT,2035;CATAAGT,2054;CGCTGAT,SW796.08;CGGTAGA,SW65.03;CTACGGA,SW64.03;GCGGAAT,ECS-10.07;TAGCGGA,SW51.06;TCGAAGA,SW51.04;TCTGTGA,ECS-1.07;TGCTGGA,1131;AACCGAGA,2149;ACAGGGAA,1128;ACGTGGTA,1122;CCATGGGT,1017;CGCGGAGA,SW129.04;CGTGTGGT,SW789.04;GCTGTGGA,SW49.06;GGATTGGT,WS98-SB.10;GTGAGGGT,SW795.09;TATCGGGA,SW43.04;TTCCTGGA,SW43.02;)
description
Panicum virgatum
http://purl.obolibrary.org/obo/NCBITaxon_38727
organism
pooled
http://www.ebi.ac.uk/efo/EFO_0000663
strain
Generic sample from Panicum virgatum
title