SAMN02086283
External Id
Cornell University
INSDC center name
2013-04-30T11:29:01.493Z
INSDC first public
2013-04-30T21:49:14.560Z
INSDC last update
SRS417502
INSDC secondary accession
live
INSDC status
Generic
NCBI submission model
Generic.1.0
NCBI submission package
SRS417502
SRA accession
This sample is a Genotyping-by-sequencing library with pooled individuals as described in http://www.maizegenetics.net/Table/Genotyping-By-Sequencing/. The restriction enzyme used for this library is ApeKI. Mapping between GBS barcodes and samples: (CTCC,NSL437871;TGCA,NSL437915;ACTA,PI391676;CAGA,PI358521;AACT,NSL67786;GCGT,Ames29394;TGCGA,Ames27187;CGAT,NSL437907;CGCTT,Ames26779;TCACC,Ames26133;CTAGC,PI550455;ACAAA,Ames26118;TTCTC,PI601728;AGCCC,NSL437937;GTATT,PI198896;CTGTA,NSL437967;ACCGT,PI587143;GTAA,PI198901;GGTTGT,Ames28930;CCAGCT,Ames28985;TTCAGA,Ames28942;TAGGAA,PI186220;GCTCTA,Ames28186;CCACAA,PI564683;GCTTA,PI539872;CTTCCA,Ab18;GAGATA,NSL437983;ATGCCT,PI221804;TATTTTT,PI340861;CTTGCTT,Ames26780;ATGAAAC,PI601785;AAAAGTT,PI583846;GAATTCA,PI608767;GAACTTC,NSL437989;GGACCTA,PI601575;GTCGATT,Ames22013;AACGCCT,Ames26119;AATATGC,B73;ACGACTAC,Ames22011;GGTGT,Ames28367;TAGCATGC,NSL65872;AGTGGA,NSL437931;TAGGCCAT,Ames26116;TGCAAGGA,PI601172;TGGTACGT,PI606330;TCTCAGTC,Ames26135;CCGGATAT,PI601792;CGCCTTAT,PI606768;AGGC,PI558523;GATC,Ames27153;TCAC,Ames28988;AGGAT,NSL437950;ATTGA,Ames28941;CATCT,Ames12727;CCTAC,PI221811;GAGGA,CIze82;GGAAC,SA24;GTCAA,PI405707;TAATA,NSL438033;TACAT,PI601569;TCGTT,PI198890;ACCTAA,NSL67796;ATATGT,NSL437895;ATCGTA,PI198902;CATCGT,CIze81;CGCGGT,NSL438039;CTATTA,Ames21512;GCCAGT,PI358522;GGAAGA,PI221805;GTACTT,PI520774;GTTGAA,blank;TAACGA,NSL437990;TGGCTA,PI550472;ACGTGTT,Ames26115;ATTAATT,PI564852;ATTGGAT,NSL437987;CATAAGT,Ames28990;CGCTGAT,Ames10265;CGGTAGA,Ames28426;CTACGGA,NSL437913;GCGGAAT,NSL437946;TAGCGGA,Ames25373;TCGAAGA,PI601493;TCTGTGA,PI509542;TGCTGGA,Ames28948;AACCGAGA,NSL30046;ACAGGGAA,PI550526;ACGTGGTA,NSL437925;CCATGGGT,NSL67790;CGCGGAGA,PI550468;CGTGTGGT,Ames28416;GCTGTGGA,NSL437934;GGATTGGT,NSL437882;GTGAGGGT,NSL437959;TATCGGGA,NSL437893;TTCCTGGA,Ames28947;CTCC,NSL437871;TGCA,NSL437915;ACTA,PI391676;CAGA,PI358521;AACT,NSL67786;GCGT,Ames29394;TGCGA,Ames27187;CGAT,NSL437907;CGCTT,Ames26779;TCACC,Ames26133;CTAGC,PI550455;ACAAA,Ames26118;TTCTC,PI601728;AGCCC,NSL437937;GTATT,PI198896;CTGTA,NSL437967;ACCGT,PI587143;GTAA,PI198901;GGTTGT,Ames28930;CCAGCT,Ames28985;TTCAGA,Ames28942;TAGGAA,PI186220;GCTCTA,Ames28186;CCACAA,PI564683;GCTTA,PI539872;CTTCCA,Ab18;GAGATA,NSL437983;ATGCCT,PI221804;TATTTTT,PI340861;CTTGCTT,Ames26780;ATGAAAC,PI601785;AAAAGTT,PI583846;GAATTCA,PI608767;GAACTTC,NSL437989;GGACCTA,PI601575;GTCGATT,Ames22013;AACGCCT,Ames26119;AATATGC,B73;ACGACTAC,Ames22011;GGTGT,Ames28367;TAGCATGC,NSL65872;AGTGGA,NSL437931;TAGGCCAT,Ames26116;TGCAAGGA,PI601172;TGGTACGT,PI606330;TCTCAGTC,Ames26135;CCGGATAT,PI601792;CGCCTTAT,PI606768;AGGC,PI558523;GATC,Ames27153;TCAC,Ames28988;AGGAT,NSL437950;ATTGA,Ames28941;CATCT,Ames12727;CCTAC,PI221811;GAGGA,CIze82;GGAAC,SA24;GTCAA,PI405707;TAATA,NSL438033;TACAT,PI601569;TCGTT,PI198890;ACCTAA,NSL67796;ATATGT,NSL437895;ATCGTA,PI198902;CATCGT,CIze81;CGCGGT,NSL438039;CTATTA,Ames21512;GCCAGT,PI358522;GGAAGA,PI221805;GTACTT,PI520774;GTTGAA,blank;TAACGA,NSL437990;TGGCTA,PI550472;ACGTGTT,Ames26115;ATTAATT,PI564852;ATTGGAT,NSL437987;CATAAGT,Ames28990;CGCTGAT,Ames10265;CGGTAGA,Ames28426;CTACGGA,NSL437913;GCGGAAT,NSL437946;TAGCGGA,Ames25373;TCGAAGA,PI601493;TCTGTGA,PI509542;TGCTGGA,Ames28948;AACCGAGA,NSL30046;ACAGGGAA,PI550526;ACGTGGTA,NSL437925;CCATGGGT,NSL67790;CGCGGAGA,PI550468;CGTGTGGT,Ames28416;GCTGTGGA,NSL437934;GGATTGGT,NSL437882;GTGAGGGT,NSL437959;TATCGGGA,NSL437893;TTCCTGGA,Ames28947;CTCC,NSL437871;TGCA,NSL437915;ACTA,PI391676;CAGA,PI358521;AACT,NSL67786;GCGT,Ames29394;TGCGA,Ames27187;CGAT,NSL437907;CGCTT,Ames26779;TCACC,Ames26133;CTAGC,PI550455;ACAAA,Ames26118;TTCTC,PI601728;AGCCC,NSL437937;GTATT,PI198896;CTGTA,NSL437967;ACCGT,PI587143;GTAA,PI198901;GGTTGT,Ames28930;CCAGCT,Ames28985;TTCAGA,Ames28942;TAGGAA,PI186220;GCTCTA,Ames28186;CCACAA,PI564683;GCTTA,PI539872;CTTCCA,Ab18;GAGATA,NSL437983;ATGCCT,PI221804;TATTTTT,PI340861;CTTGCTT,Ames26780;ATGAAAC,PI601785;AAAAGTT,PI583846;GAATTCA,PI608767;GAACTTC,NSL437989;GGACCTA,PI601575;GTCGATT,Ames22013;AACGCCT,Ames26119;AATATGC,B73;ACGACTAC,Ames22011;GGTGT,Ames28367;TAGCATGC,NSL65872;AGTGGA,NSL437931;TAGGCCAT,Ames26116;TGCAAGGA,PI601172;TGGTACGT,PI606330;TCTCAGTC,Ames26135;CCGGATAT,PI601792;CGCCTTAT,PI606768;AGGC,PI558523;GATC,Ames27153;TCAC,Ames28988;AGGAT,NSL437950;ATTGA,Ames28941;CATCT,Ames12727;CCTAC,PI221811;GAGGA,CIze82;GGAAC,SA24;GTCAA,PI405707;TAATA,NSL438033;TACAT,PI601569;TCGTT,PI198890;ACCTAA,NSL67796;ATATGT,NSL437895;ATCGTA,PI198902;CATCGT,CIze81;CGCGGT,NSL438039;CTATTA,Ames21512;GCCAGT,PI358522;GGAAGA,PI221805;GTACTT,PI520774;GTTGAA,blank;TAACGA,NSL437990;TGGCTA,PI550472;ACGTGTT,Ames26115;ATTAATT,PI564852;ATTGGAT,NSL437987;CATAAGT,Ames28990;CGCTGAT,Ames10265;CGGTAGA,Ames28426;CTACGGA,NSL437913;GCGGAAT,NSL437946;TAGCGGA,Ames25373;TCGAAGA,PI601493;TCTGTGA,PI509542;TGCTGGA,Ames28948;AACCGAGA,NSL30046;ACAGGGAA,PI550526;ACGTGGTA,NSL437925;CCATGGGT,NSL67790;CGCGGAGA,PI550468;CGTGTGGT,Ames28416;GCTGTGGA,NSL437934;GGATTGGT,NSL437882;GTGAGGGT,NSL437959;TATCGGGA,NSL437893;TTCCTGGA,Ames28947;CTCC,NSL437871;TGCA,NSL437915;ACTA,PI391676;CAGA,PI358521;AACT,NSL67786;GCGT,Ames29394;TGCGA,Ames27187;CGAT,NSL437907;CGCTT,Ames26779;TCACC,Ames26133;CTAGC,PI550455;ACAAA,Ames26118;TTCTC,PI601728;AGCCC,NSL437937;GTATT,PI198896;CTGTA,NSL437967;ACCGT,PI587143;GTAA,PI198901;GGTTGT,Ames28930;CCAGCT,Ames28985;TTCAGA,Ames28942;TAGGAA,PI186220;GCTCTA,Ames28186;CCACAA,PI564683;GCTTA,PI539872;CTTCCA,Ab18;GAGATA,NSL437983;ATGCCT,PI221804;TATTTTT,PI340861;CTTGCTT,Ames26780;ATGAAAC,PI601785;AAAAGTT,PI583846;GAATTCA,PI608767;GAACTTC,NSL437989;GGACCTA,PI601575;GTCGATT,Ames22013;AACGCCT,Ames26119;AATATGC,B73;ACGACTAC,Ames22011;GGTGT,Ames28367;TAGCATGC,NSL65872;AGTGGA,NSL437931;TAGGCCAT,Ames26116;TGCAAGGA,PI601172;TGGTACGT,PI606330;TCTCAGTC,Ames26135;CCGGATAT,PI601792;CGCCTTAT,PI606768;AGGC,PI558523;GATC,Ames27153;TCAC,Ames28988;AGGAT,NSL437950;ATTGA,Ames28941;CATCT,Ames12727;CCTAC,PI221811;GAGGA,CIze82;GGAAC,SA24;GTCAA,PI405707;TAATA,NSL438033;TACAT,PI601569;TCGTT,PI198890;ACCTAA,NSL67796;ATATGT,NSL437895;ATCGTA,PI198902;CATCGT,CIze81;CGCGGT,NSL438039;CTATTA,Ames21512;GCCAGT,PI358522;GGAAGA,PI221805;GTACTT,PI520774;GTTGAA,blank;TAACGA,NSL437990;TGGCTA,PI550472;ACGTGTT,Ames26115;ATTAATT,PI564852;ATTGGAT,NSL437987;CATAAGT,Ames28990;CGCTGAT,Ames10265;CGGTAGA,Ames28426;CTACGGA,NSL437913;GCGGAAT,NSL437946;TAGCGGA,Ames25373;TCGAAGA,PI601493;TCTGTGA,PI509542;TGCTGGA,Ames28948;AACCGAGA,NSL30046;ACAGGGAA,PI550526;ACGTGGTA,NSL437925;CCATGGGT,NSL67790;CGCGGAGA,PI550468;CGTGTGGT,Ames28416;GCTGTGGA,NSL437934;GGATTGGT,NSL437882;GTGAGGGT,NSL437959;TATCGGGA,NSL437893;TTCCTGGA,Ames28947;CTCC,NSL437871;TGCA,NSL437915;ACTA,PI391676;CAGA,PI358521;AACT,NSL67786;GCGT,Ames29394;TGCGA,Ames27187;CGAT,NSL437907;CGCTT,Ames26779;TCACC,Ames26133;CTAGC,PI550455;ACAAA,Ames26118;TTCTC,PI601728;AGCCC,NSL437937;GTATT,PI198896;CTGTA,NSL437967;ACCGT,PI587143;GTAA,PI198901;GGTTGT,Ames28930;CCAGCT,Ames28985;TTCAGA,Ames28942;TAGGAA,PI186220;GCTCTA,Ames28186;CCACAA,PI564683;GCTTA,PI539872;CTTCCA,Ab18;GAGATA,NSL437983;ATGCCT,PI221804;TATTTTT,PI340861;CTTGCTT,Ames26780;ATGAAAC,PI601785;AAAAGTT,PI583846;GAATTCA,PI608767;GAACTTC,NSL437989;GGACCTA,PI601575;GTCGATT,Ames22013;AACGCCT,Ames26119;AATATGC,B73;ACGACTAC,Ames22011;GGTGT,Ames28367;TAGCATGC,NSL65872;AGTGGA,NSL437931;TAGGCCAT,Ames26116;TGCAAGGA,PI601172;TGGTACGT,PI606330;TCTCAGTC,Ames26135;CCGGATAT,PI601792;CGCCTTAT,PI606768;AGGC,PI558523;GATC,Ames27153;TCAC,Ames28988;AGGAT,NSL437950;ATTGA,Ames28941;CATCT,Ames12727;CCTAC,PI221811;GAGGA,CIze82;GGAAC,SA24;GTCAA,PI405707;TAATA,NSL438033;TACAT,PI601569;TCGTT,PI198890;ACCTAA,NSL67796;ATATGT,NSL437895;ATCGTA,PI198902;CATCGT,CIze81;CGCGGT,NSL438039;CTATTA,Ames21512;GCCAGT,PI358522;GGAAGA,PI221805;GTACTT,PI520774;GTTGAA,blank;TAACGA,NSL437990;TGGCTA,PI550472;ACGTGTT,Ames26115;ATTAATT,PI564852;ATTGGAT,NSL437987;CATAAGT,Ames28990;CGCTGAT,Ames10265;CGGTAGA,Ames28426;CTACGGA,NSL437913;GCGGAAT,NSL437946;TAGCGGA,Ames25373;TCGAAGA,PI601493;TCTGTGA,PI509542;TGCTGGA,Ames28948;AACCGAGA,NSL30046;ACAGGGAA,PI550526;ACGTGGTA,NSL437925;CCATGGGT,NSL67790;CGCGGAGA,PI550468;CGTGTGGT,Ames28416;GCTGTGGA,NSL437934;GGATTGGT,NSL437882;GTGAGGGT,NSL437959;TATCGGGA,NSL437893;TTCCTGGA,Ames28947;CTCC,NSL437871;TGCA,NSL437915;ACTA,PI391676;CAGA,PI358521;AACT,NSL67786;GCGT,Ames29394;TGCGA,Ames27187;CGAT,NSL437907;CGCTT,Ames26779;TCACC,Ames26133;CTAGC,PI550455;ACAAA,Ames26118;TTCTC,PI601728;AGCCC,NSL437937;GTATT,PI198896;CTGTA,NSL437967;ACCGT,PI587143;GTAA,PI198901;GGTTGT,Ames28930;CCAGCT,Ames28985;TTCAGA,Ames28942;TAGGAA,PI186220;GCTCTA,Ames28186;CCACAA,PI564683;GCTTA,PI539872;CTTCCA,Ab18;GAGATA,NSL437983;ATGCCT,PI221804;TATTTTT,PI340861;CTTGCTT,Ames26780;ATGAAAC,PI601785;AAAAGTT,PI583846;GAATTCA,PI608767;GAACTTC,NSL437989;GGACCTA,PI601575;GTCGATT,Ames22013;AACGCCT,Ames26119;AATATGC,B73;ACGACTAC,Ames22011;GGTGT,Ames28367;TAGCATGC,NSL65872;AGTGGA,NSL437931;TAGGCCAT,Ames26116;TGCAAGGA,PI601172;TGGTACGT,PI606330;TCTCAGTC,Ames26135;CCGGATAT,PI601792;CGCCTTAT,PI606768;AGGC,PI558523;GATC,Ames27153;TCAC,Ames28988;AGGAT,NSL437950;ATTGA,Ames28941;CATCT,Ames12727;CCTAC,PI221811;GAGGA,CIze82;GGAAC,SA24;GTCAA,PI405707;TAATA,NSL438033;TACAT,PI601569;TCGTT,PI198890;ACCTAA,NSL67796;ATATGT,NSL437895;ATCGTA,PI198902;CATCGT,CIze81;CGCGGT,NSL438039;CTATTA,Ames21512;GCCAGT,PI358522;GGAAGA,PI221805;GTACTT,PI520774;GTTGAA,blank;TAACGA,NSL437990;TGGCTA,PI550472;ACGTGTT,Ames26115;ATTAATT,PI564852;ATTGGAT,NSL437987;CATAAGT,Ames28990;CGCTGAT,Ames10265;CGGTAGA,Ames28426;CTACGGA,NSL437913;GCGGAAT,NSL437946;TAGCGGA,Ames25373;TCGAAGA,PI601493;TCTGTGA,PI509542;TGCTGGA,Ames28948;AACCGAGA,NSL30046;ACAGGGAA,PI550526;ACGTGGTA,NSL437925;CCATGGGT,NSL67790;CGCGGAGA,PI550468;CGTGTGGT,Ames28416;GCTGTGGA,NSL437934;GGATTGGT,NSL437882;GTGAGGGT,NSL437959;TATCGGGA,NSL437893;TTCCTGGA,Ames28947;CTCC,NSL437871;TGCA,NSL437915;ACTA,PI391676;CAGA,PI358521;AACT,NSL67786;GCGT,Ames29394;TGCGA,Ames27187;CGAT,NSL437907;CGCTT,Ames26779;TCACC,Ames26133;CTAGC,PI550455;ACAAA,Ames26118;TTCTC,PI601728;AGCCC,NSL437937;GTATT,PI198896;CTGTA,NSL437967;ACCGT,PI587143;GTAA,PI198901;GGTTGT,Ames28930;CCAGCT,Ames28985;TTCAGA,Ames28942;TAGGAA,PI186220;GCTCTA,Ames28186;CCACAA,PI564683;GCTTA,PI539872;CTTCCA,Ab18;GAGATA,NSL437983;ATGCCT,PI221804;TATTTTT,PI340861;CTTGCTT,Ames26780;ATGAAAC,PI601785;AAAAGTT,PI583846;GAATTCA,PI608767;GAACTTC,NSL437989;GGACCTA,PI601575;GTCGATT,Ames22013;AACGCCT,Ames26119;AATATGC,B73;ACGACTAC,Ames22011;GGTGT,Ames28367;TAGCATGC,NSL65872;AGTGGA,NSL437931;TAGGCCAT,Ames26116;TGCAAGGA,PI601172;TGGTACGT,PI606330;TCTCAGTC,Ames26135;CCGGATAT,PI601792;CGCCTTAT,PI606768;AGGC,PI558523;GATC,Ames27153;TCAC,Ames28988;AGGAT,NSL437950;ATTGA,Ames28941;CATCT,Ames12727;CCTAC,PI221811;GAGGA,CIze82;GGAAC,SA24;GTCAA,PI405707;TAATA,NSL438033;TACAT,PI601569;TCGTT,PI198890;ACCTAA,NSL67796;ATATGT,NSL437895;ATCGTA,PI198902;CATCGT,CIze81;CGCGGT,NSL438039;CTATTA,Ames21512;GCCAGT,PI358522;GGAAGA,PI221805;GTACTT,PI520774;GTTGAA,blank;TAACGA,NSL437990;TGGCTA,PI550472;ACGTGTT,Ames26115;ATTAATT,PI564852;ATTGGAT,NSL437987;CATAAGT,Ames28990;CGCTGAT,Ames10265;CGGTAGA,Ames28426;CTACGGA,NSL437913;GCGGAAT,NSL437946;TAGCGGA,Ames25373;TCGAAGA,PI601493;TCTGTGA,PI509542;TGCTGGA,Ames28948;AACCGAGA,NSL30046;ACAGGGAA,PI550526;ACGTGGTA,NSL437925;CCATGGGT,NSL67790;CGCGGAGA,PI550468;CGTGTGGT,Ames28416;GCTGTGGA,NSL437934;GGATTGGT,NSL437882;GTGAGGGT,NSL437959;TATCGGGA,NSL437893;TTCCTGGA,Ames28947;)
description
Zea mays
http://purl.obolibrary.org/obo/NCBITaxon_4577
organism
pooled
http://www.ebi.ac.uk/efo/EFO_0000663
strain
Generic sample from Zea mays
title