SAMN02197972
External Id
ENCODE DCC
INSDC center name
2013-06-11T12:57:54.177Z
INSDC first public
2014-08-27T03:55:52.807Z
INSDC last update
live
INSDC status
Generic
NCBI submission model
Generic.1.0
NCBI submission package
Refer to publication or NDRI
biomaterial provider
human pancreatic islets
cell description
pancreatic islets from 2 donors, the sources of these primary cells are cadavers from National Disease Research Interchange (NDRI) and another sample isolated as in Bucher, P. et al., Assessment of a novel two-component enzyme preparation for human islet isolation and transplantation. Transplantation 79, 917 (2005)
cell description
normal
http://purl.obolibrary.org/obo/PATO_0000461
cell karyotype
endoderm
http://purl.obolibrary.org/obo/UBERON_0000925
cell lineage
M
cell sex
generic_male
controlid
DnaseSeq
datatype
DNaseI HS Sequencing
datatype description
align_on_cluster_bwa.pl v 1
labversion
private-noSequence p-value cutoff: 0.05,private-noSequence baseAlignCounts.pl v 1,private-noSequence fseq v 1.84, iff_generic_male
labversion
Homo sapiens
http://purl.obolibrary.org/obo/NCBITaxon_9606
organism
1
replicate
tier 1
replicate description
PanIslets
source_name
Duke_DnaseSeq_PanIslets
title
No special treatment or protocol applies
treatment description