SAMN02116945
External Id
Cornell University
INSDC center name
2013-05-03T12:23:49.443Z
INSDC first public
2013-05-05T23:00:15.170Z
INSDC last update
SRS418518
INSDC secondary accession
live
INSDC status
Generic
NCBI submission model
Generic.1.0
NCBI submission package
SRS418518
SRA accession
This sample is a Genotyping-by-sequencing library with pooled individuals as described in http://www.maizegenetics.net/Table/Genotyping-By-Sequencing/. The restriction enzyme used for this library is ApeKI. Mapping between GBS barcodes and samples: (CTCC,SW58.04;TGCA,SW808.07;ACTA,ECS-10.08;CAGA,SW50.04;AACT,SW46.02;GCGT,Cave-in-Rock.05;TGCGA,SW64.03;CGAT,SW49.04;CGCTT,SW102.02;TCACC,SW112.05;CTAGC,SW128.06;ACAAA,SW123.09;TTCTC,WS98-SB.02;AGCCC,SW123.05;GTATT,SW102.09;CTGTA,Shelter.08;ACCGT,SW43.08;GTAA,SW808.08;GGTTGT,SW795.09;CCAGCT,SW805.08;TTCAGA,Blank;TAGGAA,SW64.05;GCTCTA,Cave-in-Rock.09;CCACAA,Carthage.05;GCTTA,Blackwell.03;CTTCCA,SW793.01;GAGATA,ECS-12.02;ATGCCT,SW129.02;TATTTTT,Shelter.10;CTTGCTT,SW788.09;ATGAAAC,Shelter.04;AAAAGTT,Blackwell.10;GAATTCA,SW116.08;GAACTTC,SW110.04;GGACCTA,SW43.06;GTCGATT,SW793.10;AACGCCT,SW115.01;AATATGC,SW803.02;ACGACTAC,WS4U.07;GGTGT,SW788.03;TAGCATGC,SW787.06;AGTGGA,SW781.09;TAGGCCAT,SW795.07;TGCAAGGA,Kanlow.06;TGGTACGT,SW122.02;TCTCAGTC,WS98-SB.04;CCGGATAT,SW803.04;CGCCTTAT,SW40.07;AGGC,Kanlow.01;GATC,WS4U.03;TCAC,WS98-SB.07;AGGAT,SW114.07;ATTGA,WS98-SB.06;CATCT,SW49.01;CCTAC,SW797.06;GAGGA,SWG32.02;GGAAC,SW110.06;GTCAA,SW65.05;TAATA,SW123.04;TACAT,SW806.02;TCGTT,SW38.03;ACCTAA,SW63.02;ATATGT,SW129.10;ATCGTA,SW809.08;CATCGT,Dacotah.05;CGCGGT,SW803.03;CTATTA,SW46.01;GCCAGT,SW115.06;GGAAGA,KY1625.01;GTACTT,SW112.04;GTTGAA,ECS-2.06;TAACGA,SW806.09;TGGCTA,Timber.04;ACGTGTT,SW116.02;ATTAATT,SW796.04;ATTGGAT,SW793.09;CATAAGT,Kanlow.04;CGCTGAT,SW116.07;CGGTAGA,SW31.05;CTACGGA,Carthage.06;GCGGAAT,Timber.06;TAGCGGA,SW797.02;TCGAAGA,Pathfinder.01;TCTGTGA,SW51.08;TGCTGGA,SW803.06;AACCGAGA,SW787.08;ACAGGGAA,SW46.09;ACGTGGTA,SW33.01;CCATGGGT,SW110.10;CGCGGAGA,SW40.08;CGTGTGGT,WS98-SB.09;GCTGTGGA,SW63.07;GGATTGGT,SW112.06;GTGAGGGT,SWG39.09;TATCGGGA,SW110.02;TTCCTGGA,Shelter.07;)
description
Panicum virgatum
http://purl.obolibrary.org/obo/NCBITaxon_38727
organism
pooled
http://www.ebi.ac.uk/efo/EFO_0000663
strain
Generic sample from Panicum virgatum
title