SAMN02116946
External Id
Cornell University
INSDC center name
2013-05-03T12:23:49.697Z
INSDC first public
2013-05-05T23:00:15.533Z
INSDC last update
SRS418519
INSDC secondary accession
live
INSDC status
Generic
NCBI submission model
Generic.1.0
NCBI submission package
SRS418519
SRA accession
This sample is a Genotyping-by-sequencing library with pooled individuals as described in http://www.maizegenetics.net/Table/Genotyping-By-Sequencing/. The restriction enzyme used for this library is ApeKI. Mapping between GBS barcodes and samples: (CTCC,SW796.10;TGCA,SW109.06;ACTA,SW116.10;CAGA,SW114.04;AACT,SW109.09;GCGT,SW803.09;TGCGA,Sunburst.02;CGAT,SW46.05;CGCTT,SW122.01;TCACC,SW40.03;CTAGC,SW63.04;ACAAA,SW110.07;TTCTC,SW122.05;AGCCC,SW40.05;GTATT,SW789.01;CTGTA,SW65.02;ACCGT,SWG39.01;GTAA,SW781.06;GGTTGT,High Tide.04;CCAGCT,SW127.04;TTCAGA,Blackwell.06;TAGGAA,SW805.02;GCTCTA,SW806.05;CCACAA,SW116.04;GCTTA,SW797.01;CTTCCA,SW805.05;GAGATA,SW64.09;ATGCCT,SW123.06;TATTTTT,SW65.04;CTTGCTT,SW789.07;ATGAAAC,Cave-in-Rock.07;AAAAGTT,SW798.05;GAATTCA,SW110.09;GAACTTC,KY1625.02;GGACCTA,Pathfinder.07;GTCGATT,SW798.06;AACGCCT,SW787.07;AATATGC,SW793.02;ACGACTAC,SW796.02;GGTGT,Sunburst.06;TAGCATGC,SW128.07;AGTGGA,SW127.02;TAGGCCAT,ECS-12.01;TGCAAGGA,SW788.04;TGGTACGT,Blackwell.05;TCTCAGTC,SW58.02;CCGGATAT,SW803.07;CGCCTTAT,SW65.08;AGGC,ECS-2.03;GATC,SW808.03;TCAC,SW64.06;AGGAT,SW796.05;ATTGA,SWG39.03;CATCT,SW31.06;CCTAC,SW43.10;GAGGA,SW788.01;GGAAC,SWG39.02;GTCAA,SW797.10;TAATA,SWG39.07;TACAT,SWG32.05;TCGTT,Cave-in-Rock.04;ACCTAA,SW797.05;ATATGT,ECS-10.10;ATCGTA,SW31.03;CATCGT,Pathfinder.03;CGCGGT,SW786.07;CTATTA,SW49.03;GCCAGT,SW50.03;GGAAGA,SW109.05;GTACTT,SW781.05;GTTGAA,Blackwell.04;TAACGA,ECS-2.02;TGGCTA,SW803.05;ACGTGTT,SW809.10;ATTAATT,SW124.04;ATTGGAT,SW64.02;CATAAGT,SW102.06;CGCTGAT,Timber.07;CGGTAGA,SW51.03;CTACGGA,KY1625.09;GCGGAAT,Blank;TAGCGGA,SW806.04;TCGAAGA,Blackwell.09;TCTGTGA,Blackwell.02;TGCTGGA,SW124.02;AACCGAGA,SW124.05;ACAGGGAA,SW799.02;ACGTGGTA,SW129.05;CCATGGGT,ECS-6.02;CGCGGAGA,Shelter.06;CGTGTGGT,SW806.06;GCTGTGGA,SW799.05;GGATTGGT,SW112.09;GTGAGGGT,SW809.03;TATCGGGA,SW782.02;TTCCTGGA,Timber.03;)
description
Panicum virgatum
http://purl.obolibrary.org/obo/NCBITaxon_38727
organism
pooled
http://www.ebi.ac.uk/efo/EFO_0000663
strain
Generic sample from Panicum virgatum
title