SAMN02086264
External Id
Cornell University
INSDC center name
2013-04-30T11:29:10.193Z
INSDC first public
2013-04-30T21:05:14.470Z
INSDC last update
SRS417483
INSDC secondary accession
live
INSDC status
Generic
NCBI submission model
Generic.1.0
NCBI submission package
SRS417483
SRA accession
This sample is a Genotyping-by-sequencing library with pooled individuals as described in http://www.maizegenetics.net/Table/Genotyping-By-Sequencing/. The restriction enzyme used for this library is ApeKI. Mapping between GBS barcodes and samples: (CTCC,C49A;TGCA,NC350;ACTA,B73;CAGA,CML328;AACT,Ab28A;GCGT,B79;TGCGA,CML61;CGAT,NC222;CGCTT,CMV3;TCACC,CI91B;CTAGC,CO255;ACAAA,CI31A;TTCTC,CI64;AGCCC,Mo47;GTATT,BLANK;CTGTA,Ki44;ACCGT,NC236;GTAA,Wf9;GGTTGT,B164;CCAGCT,K148;TTCAGA,KY226;TAGGAA,Sg1533;GCTCTA,OH7B;CCACAA,NC258;GCTTA,A634;CTTCCA,Tzi8;GAGATA,I205;ATGCCT,F44;TATTTTT,P39;CTTGCTT,NC304;ATGAAAC,CML38;AAAAGTT,A556;GAATTCA,HP301;GAACTTC,N28Ht;GGACCTA,B46;GTCGATT,Mp339;AACGCCT,Il14H;AATATGC,CML218;ACGACTAC,B75;GGTGT,CML108;TAGCATGC,K4;AGTGGA,CML261;TAGGCCAT,CML322;TGCAAGGA,W22Rrstd;TGGTACGT,NC314;TCTCAGTC,MEF156552;CCGGATAT,N192;CGCCTTAT,MS153;AGGC,CML69;GATC,Ki2021;TCAC,CI90C;AGGAT,NC360;ATTGA,Pa91;CATCT,H84;CCTAC,NC352;GAGGA,B2;GGAAC,W64A;GTCAA,E2558W;TAATA,Ki3;TACAT,MO1W;TCGTT,NC238;ACCTAA,Pa880;ATATGT,IDS69;ATCGTA,T232;CATCGT,Ia5125;CGCGGT,NC366;CTATTA,NC302;GCCAGT,Pa762;GGAAGA,Ki43;GTACTT,VA102;GTTGAA,CML247;TAACGA,NC362;TGGCTA,DE811;ACGTGTT,Oh43;ATTAATT,A661;ATTGGAT,M162W;CATAAGT,Va85;CGCTGAT,IA2132;CGGTAGA,CML10;CTACGGA,NC346;GCGGAAT,K64;TAGCGGA,KY228;TCGAAGA,Mo45;TCTGTGA,U267Y;TGCTGGA,Mo17;AACCGAGA,M37W;ACAGGGAA,Yu796NS;ACGTGGTA,4722;CCATGGGT,NC326;CGCGGAGA,CM37;CGTGTGGT,B68;GCTGTGGA,CML154Q;GGATTGGT,A635;GTGAGGGT,CH9;TATCGGGA,Va26;TTCCTGGA,BLANK;CTCC,C49A;TGCA,NC350;ACTA,B73;CAGA,CML328;AACT,Ab28A;GCGT,B79;TGCGA,CML61;CGAT,NC222;CGCTT,CMV3;TCACC,CI91B;CTAGC,CO255;ACAAA,CI31A;TTCTC,CI64;AGCCC,Mo47;GTATT,BLANK;CTGTA,Ki44;ACCGT,NC236;GTAA,Wf9;GGTTGT,B164;CCAGCT,K148;TTCAGA,KY226;TAGGAA,Sg1533;GCTCTA,OH7B;CCACAA,NC258;GCTTA,A634;CTTCCA,Tzi8;GAGATA,I205;ATGCCT,F44;TATTTTT,P39;CTTGCTT,NC304;ATGAAAC,CML38;AAAAGTT,A556;GAATTCA,HP301;GAACTTC,N28Ht;GGACCTA,B46;GTCGATT,Mp339;AACGCCT,Il14H;AATATGC,CML218;ACGACTAC,B75;GGTGT,CML108;TAGCATGC,K4;AGTGGA,CML261;TAGGCCAT,CML322;TGCAAGGA,W22Rrstd;TGGTACGT,NC314;TCTCAGTC,MEF156552;CCGGATAT,N192;CGCCTTAT,MS153;AGGC,CML69;GATC,Ki2021;TCAC,CI90C;AGGAT,NC360;ATTGA,Pa91;CATCT,H84;CCTAC,NC352;GAGGA,B2;GGAAC,W64A;GTCAA,E2558W;TAATA,Ki3;TACAT,MO1W;TCGTT,NC238;ACCTAA,Pa880;ATATGT,IDS69;ATCGTA,T232;CATCGT,Ia5125;CGCGGT,NC366;CTATTA,NC302;GCCAGT,Pa762;GGAAGA,Ki43;GTACTT,VA102;GTTGAA,CML247;TAACGA,NC362;TGGCTA,DE811;ACGTGTT,Oh43;ATTAATT,A661;ATTGGAT,M162W;CATAAGT,Va85;CGCTGAT,IA2132;CGGTAGA,CML10;CTACGGA,NC346;GCGGAAT,K64;TAGCGGA,KY228;TCGAAGA,Mo45;TCTGTGA,U267Y;TGCTGGA,Mo17;AACCGAGA,M37W;ACAGGGAA,Yu796NS;ACGTGGTA,4722;CCATGGGT,NC326;CGCGGAGA,CM37;CGTGTGGT,B68;GCTGTGGA,CML154Q;GGATTGGT,A635;GTGAGGGT,CH9;TATCGGGA,Va26;TTCCTGGA,BLANK;CTCC,C49A;TGCA,NC350;ACTA,B73;CAGA,CML328;AACT,Ab28A;GCGT,B79;TGCGA,CML61;CGAT,NC222;CGCTT,CMV3;TCACC,CI91B;CTAGC,CO255;ACAAA,CI31A;TTCTC,CI64;AGCCC,Mo47;GTATT,BLANK;CTGTA,Ki44;ACCGT,NC236;GTAA,Wf9;GGTTGT,B164;CCAGCT,K148;TTCAGA,KY226;TAGGAA,Sg1533;GCTCTA,OH7B;CCACAA,NC258;GCTTA,A634;CTTCCA,Tzi8;GAGATA,I205;ATGCCT,F44;TATTTTT,P39;CTTGCTT,NC304;ATGAAAC,CML38;AAAAGTT,A556;GAATTCA,HP301;GAACTTC,N28Ht;GGACCTA,B46;GTCGATT,Mp339;AACGCCT,Il14H;AATATGC,CML218;ACGACTAC,B75;GGTGT,CML108;TAGCATGC,K4;AGTGGA,CML261;TAGGCCAT,CML322;TGCAAGGA,W22Rrstd;TGGTACGT,NC314;TCTCAGTC,MEF156552;CCGGATAT,N192;CGCCTTAT,MS153;AGGC,CML69;GATC,Ki2021;TCAC,CI90C;AGGAT,NC360;ATTGA,Pa91;CATCT,H84;CCTAC,NC352;GAGGA,B2;GGAAC,W64A;GTCAA,E2558W;TAATA,Ki3;TACAT,MO1W;TCGTT,NC238;ACCTAA,Pa880;ATATGT,IDS69;ATCGTA,T232;CATCGT,Ia5125;CGCGGT,NC366;CTATTA,NC302;GCCAGT,Pa762;GGAAGA,Ki43;GTACTT,VA102;GTTGAA,CML247;TAACGA,NC362;TGGCTA,DE811;ACGTGTT,Oh43;ATTAATT,A661;ATTGGAT,M162W;CATAAGT,Va85;CGCTGAT,IA2132;CGGTAGA,CML10;CTACGGA,NC346;GCGGAAT,K64;TAGCGGA,KY228;TCGAAGA,Mo45;TCTGTGA,U267Y;TGCTGGA,Mo17;AACCGAGA,M37W;ACAGGGAA,Yu796NS;ACGTGGTA,4722;CCATGGGT,NC326;CGCGGAGA,CM37;CGTGTGGT,B68;GCTGTGGA,CML154Q;GGATTGGT,A635;GTGAGGGT,CH9;TATCGGGA,Va26;TTCCTGGA,BLANK;)
description
Zea mays
http://purl.obolibrary.org/obo/NCBITaxon_4577
organism
pooled
http://www.ebi.ac.uk/efo/EFO_0000663
strain
Generic sample from Zea mays
title