SAMN02116468
External Id
Cornell University
INSDC center name
2013-05-03T12:29:25.430Z
INSDC first public
2013-05-06T14:10:04.380Z
INSDC last update
SRS418818
INSDC secondary accession
live
INSDC status
Generic
NCBI submission model
Generic.1.0
NCBI submission package
SRS418818
SRA accession
This sample is a Genotyping-by-sequencing library with pooled individuals as described in http://www.maizegenetics.net/Table/Genotyping-By-Sequencing/. The restriction enzyme used for this library is ApeKI. Mapping between GBS barcodes and samples: (AGGC,MARS-WEMA_269939;TCAAGTT,Blank;ATGACGC,MARS-WEMA_270129;CGCTTGAA,MARS-WEMA_270224;GATT,MARS-WEMA_269947;GATCATA,MARS-WEMA_270041;TATTGCA,MARS-WEMA_270137;ATCGGTGT,MARS-WEMA_270232;CGAA,MARS-WEMA_269955;GCATTGA,MARS-WEMA_270049;GGATATC,MARS-WEMA_270145;CCTACCGA,MARS-WEMA_270240;GTCC,MARS-WEMA_269963;CAGGTAT,MARS-WEMA_270057;CCGAGCT,MARS-WEMA_270153;GGACAATA,MARS-WEMA_270248;ACAT,MARS-WEMA_269971;TGCAATA,MARS-WEMA_270065;TTGATAC,MARS-WEMA_270161;AACGGAAT,MARS-WEMA_270256;GCGA,MARS-WEMA_269979;ATATCGT,MARS-WEMA_270073;CACGACT,MARS-WEMA_270169;TCGATGGT,MARS-WEMA_270264;TGCT,MARS-WEMA_269987;AGTCTAT,MARS-WEMA_270081;ATCTAGC,Blank;GTTCATTA,MARS-WEMA_270272;CCTC,MARS-WEMA_269995;GTCTGAA,MARS-WEMA_270089;TGAATTC,MARS-WEMA_270184;GAATCGAA,MARS-WEMA_270280;AACA,MARS-WEMA_270003;ATCAGTT,MARS-WEMA_270097;CGGCTCA,MARS-WEMA_270192;CATGGTGT,Blank;CTGT,MARS-WEMA_270011;CAGTTGA,MARS-WEMA_270105;GGTACAC,MARS-WEMA_270200;TGGCTATT,MARS-WEMA_270295;TAAC,MARS-WEMA_270019;TGTGCAA,MARS-WEMA_270113;AATGTCT,MARS-WEMA_270208;ACCACCGT,MARS-WEMA_270303;CTCGA,MARS-WEMA_270027;CGACAGT,MARS-WEMA_270121;TCATGAC,MARS-WEMA_270216;CTATGTAA,MARS-WEMA_270311;ACCGT,MARS-WEMA_269940;ACGTGTA,MARS-WEMA_270034;TTCGGAC,MARS-WEMA_270130;AACGAGTA,MARS-WEMA_270225;CGTCA,MARS-WEMA_269948;GATGCAT,MARS-WEMA_270042;GCTTAGC,MARS-WEMA_270138;CCGACCAT,MARS-WEMA_270233;TCGCA,MARS-WEMA_269956;CTAATGT,MARS-WEMA_270050;ACTGCCA,MARS-WEMA_270146;TGTCTTAA,MARS-WEMA_270241;CGCAT,MARS-WEMA_269964;GTCGATA,MARS-WEMA_270058;TAGTACT,MARS-WEMA_270154;GTATACTA,MARS-WEMA_270249;GCACT,MARS-WEMA_269972;TATACGT,MARS-WEMA_270066;GACACTC,MARS-WEMA_270162;TGTGCAGT,MARS-WEMA_270257;AGCTA,MARS-WEMA_269980;GCGTAAT,MARS-WEMA_270074;CGAGTAC,MARS-WEMA_270170;ATGCTGGT,MARS-WEMA_270265;CAGCT,MARS-WEMA_269988;AGCGTTA,MARS-WEMA_270082;ATATGTC,MARS-WEMA_270177;GCAAGTAA,MARS-WEMA_270273;TCAGC,MARS-WEMA_269996;ATCCGGA,MARS-WEMA_270090;TGGACCT,MARS-WEMA_270185;CAGGAATA,MARS-WEMA_270281;CATGC,MARS-WEMA_270004;TCAGTAT,MARS-WEMA_270098;CATATGC,MARS-WEMA_270193;GTCTGGAT,MARS-WEMA_270288;GCTAC,MARS-WEMA_270012;CAATGTT,MARS-WEMA_270106;TTCGCCA,MARS-WEMA_270201;CACCACGT,MARS-WEMA_270296;CTGAC,MARS-WEMA_270020;GTTACGA,MARS-WEMA_270114;AGTTACT,MARS-WEMA_270209;TCATTGTA,MARS-WEMA_270304;GACTC,MARS-WEMA_270028;TGCATAT,MARS-WEMA_270122;GTGCCAC,MARS-WEMA_270217;GGTTCATT,MARS-WEMA_270312;ACGTC,MARS-WEMA_269941;CAGCGTA,MARS-WEMA_270035;ACCGGTC,MARS-WEMA_270131;AAGATCGA,MARS-WEMA_270226;CGATC,MARS-WEMA_269949;AGTTCGA,MARS-WEMA_270043;CGGTAGC,MARS-WEMA_270139;CGAAGAAT,MARS-WEMA_270234;ATGCGT,MARS-WEMA_269957;GCTAATT,MARS-WEMA_270051;GCAGTTC,MARS-WEMA_270147;TCTGATTA,MARS-WEMA_270242;TCCAGT,MARS-WEMA_269965;ACGCTGA,MARS-WEMA_270059;TATAGTC,MARS-WEMA_270155;ATCTCTGA,MARS-WEMA_270250;GCTTGA,MARS-WEMA_269973;TAAGCTT,MARS-WEMA_270067;ACTCCGC,MARS-WEMA_270163;AAGCAGAT,MARS-WEMA_270258;TCCGTA,MARS-WEMA_269981;CTTAGAT,MARS-WEMA_270075;GTATTAC,MARS-WEMA_270171;TGCGGATT,MARS-WEMA_270266;TCGGAT,MARS-WEMA_269989;TGATACA,MARS-WEMA_270083;TGAGCGC,MARS-WEMA_270178;CTCCTCGA,MARS-WEMA_270274;GTCTTA,MARS-WEMA_269997;ACCGAGT,MARS-WEMA_270091;GAGTCGC,MARS-WEMA_270186;GGTACTAT,MARS-WEMA_270282;CGGAGT,MARS-WEMA_270005;GTACTTA,MARS-WEMA_270099;ATTGATC,MARS-WEMA_270194;ACAGGATA,MARS-WEMA_270289;CGTCTA,MARS-WEMA_270013;ATGTCAA,MARS-WEMA_270107;TCCACGC,MARS-WEMA_270202;GATCTGGT,MARS-WEMA_270297;CACGTT,MARS-WEMA_270021;CACAGGT,MARS-WEMA_270115;GTTATTC,MARS-WEMA_270210;CTGAAGAA,MARS-WEMA_270305;GTTAGC,MARS-WEMA_270029;GGTGGCA,MARS-WEMA_270123;ATGCACC,MARS-WEMA_270218;TCCGCCAA,MARS-WEMA_270313;AGCATT,MARS-WEMA_269942;CTGAATT,MARS-WEMA_270036;TATGTAC,MARS-WEMA_270132;ATATTCGT,MARS-WEMA_270227;CTCCGA,MARS-WEMA_269950;TCGTTAA,MARS-WEMA_270044;AGACAAGT,MARS-WEMA_270140;CGGTGATT,MARS-WEMA_270235;TTGGCA,MARS-WEMA_269958;TGATCAT,MARS-WEMA_270052;GGCCGAGT,MARS-WEMA_270148;TATGCTGA,MARS-WEMA_270243;CCACGT,MARS-WEMA_269966;CGTCGGA,MARS-WEMA_270060;AACAAGGT,MARS-WEMA_270156;GAACAGTT,MARS-WEMA_270251;GATGTC,MARS-WEMA_269974;GACTATT,MARS-WEMA_270068;TAACGAGA,MARS-WEMA_270164;ACGATTAA,MARS-WEMA_270259;TGTTAC,MARS-WEMA_269982;TAGGTCA,MARS-WEMA_270076;ATACAGGA,MARS-WEMA_270172;GGTTACGT,MARS-WEMA_270267;CAGTTA,MARS-WEMA_269990;GCAACGT,MARS-WEMA_270084;CACAGAGT,MARS-WEMA_270179;TTACGGTA,MARS-WEMA_270275;GCCTAT,MARS-WEMA_269998;ACTTGAT,MARS-WEMA_270092;CGGCAGGT,MARS-WEMA_270187;CACGCCAT,MARS-WEMA_270283;AGTGGC,MARS-WEMA_270006;TCTGATA,MARS-WEMA_270100;GCGCGTGA,MARS-WEMA_270195;TCGAGATA,MARS-WEMA_270290;TGACCT,MARS-WEMA_270014;ATAGTCA,MARS-WEMA_270108;ACAATGGA,MARS-WEMA_270203;AGAACTGA,MARS-WEMA_270298;TTGCAC,MARS-WEMA_270022;TAGCCAT,MARS-WEMA_270116;ACAAGAGT,MARS-WEMA_270211;GTTCTAAT,MARS-WEMA_270306;CTAGCT,MARS-WEMA_270030;AGGAGTC,MARS-WEMA_270124;GAACATGA,MARS-WEMA_270219;CCTTAGAA,MARS-WEMA_270314;TAGTGC,MARS-WEMA_269943;GTAGAGC,MARS-WEMA_270037;CAAGAAGT,MARS-WEMA_270133;GACTGTGT,MARS-WEMA_270228;GTTCCA,MARS-WEMA_269951;GACCTAT,MARS-WEMA_270045;GTCATGGT,MARS-WEMA_270141;CGCGCCTA,MARS-WEMA_270236;TGAATC,MARS-WEMA_269959;CATTAGT,MARS-WEMA_270053;AACAGTGA,MARS-WEMA_270149;TTGCATAT,MARS-WEMA_270244;CGCCAT,MARS-WEMA_269967;ATTAGCA,MARS-WEMA_270061;GTGCAAGA,MARS-WEMA_270157;GCTATAGA,MARS-WEMA_270252;ATCGTC,MARS-WEMA_269975;GAATCTA,MARS-WEMA_270069;CAATAGGA,MARS-WEMA_270165;ACAGCCTT,MARS-WEMA_270260;GTCACT,MARS-WEMA_269983;TGTCATT,MARS-WEMA_270077;TGCAGTGT,MARS-WEMA_270173;CTGTGGTA,MARS-WEMA_270268;CATCGC,MARS-WEMA_269991;GCCAGAT,MARS-WEMA_270085;AGGCTAGA,MARS-WEMA_270180;TGCTTAAT,MARS-WEMA_270276;AGGTCT,MARS-WEMA_269999;CCAGGTA,MARS-WEMA_270093;CTAGTGGT,MARS-WEMA_270188;AATGACGA,MARS-WEMA_270284;CCTGCA,MARS-WEMA_270007;TGGCAAC,MARS-WEMA_270101;GCTAGTGT,MARS-WEMA_270196;AGAACGAT,MARS-WEMA_270291;GTACTC,MARS-WEMA_270015;ATGATCT,MARS-WEMA_270109;GCTGCGGA,MARS-WEMA_270204;GTGCGATT,MARS-WEMA_270299;ACCTGC,MARS-WEMA_270023;CATGTTA,MARS-WEMA_270117;TCGCAAGT,MARS-WEMA_270212;CTAATTGA,MARS-WEMA_270307;CTTGAC,MARS-WEMA_270031;TGTAAGC,MARS-WEMA_270125;CGATGTGT,MARS-WEMA_270220;TAGCAGTA,MARS-WEMA_270315;ACCGCT,MARS-WEMA_269944;ACGGCAT,MARS-WEMA_270038;AACGTAGA,MARS-WEMA_270134;TCCGATAT,MARS-WEMA_270229;GCTCAC,MARS-WEMA_269952;TTCTTGA,MARS-WEMA_270046;CTCACGGA,MARS-WEMA_270142;GCCTCCGA,MARS-WEMA_270237;CTATGC,MARS-WEMA_269960;GGACCTT,MARS-WEMA_270054;TAGCGTGT,MARS-WEMA_270150;AGTCGTGT,MARS-WEMA_270245;CAGCCT,MARS-WEMA_269968;GTGTACA,MARS-WEMA_270062;ACGTAAGA,MARS-WEMA_270158;CATGTATT,MARS-WEMA_270253;GCCATC,MARS-WEMA_269976;TAGCGGC,MARS-WEMA_270070;CGTATGGT,MARS-WEMA_270166;TGAAGCAA,MARS-WEMA_270261;CGCTCA,MARS-WEMA_269984;CGCTTAA,MARS-WEMA_270078;GTACGTGT,MARS-WEMA_270174;GCATTGGT,MARS-WEMA_270269;ACGCTC,MARS-WEMA_269992;GATAGCT,MARS-WEMA_270086;TTCGAAGA,MARS-WEMA_270181;AAGCGATA,MARS-WEMA_270277;CTGATC,MARS-WEMA_270000;AGAGCCT,MARS-WEMA_270094;AATACGGA,MARS-WEMA_270189;GTCAATAT,MARS-WEMA_270285;CCAGTC,MARS-WEMA_270008;TACGAGC,MARS-WEMA_270102;TGACTGGT,MARS-WEMA_270197;CGGCCGTA,MARS-WEMA_270292;TACGCC,MARS-WEMA_270016;TTGACTA,MARS-WEMA_270110;GCGGATGT,MARS-WEMA_270205;TTAGTCGA,MARS-WEMA_270300;CCGTAC,MARS-WEMA_270024;CGCCGAT,MARS-WEMA_270118;CATTGAGA,MARS-WEMA_270213;GACTCAAT,MARS-WEMA_270308;TCGACC,MARS-WEMA_270032;AATTGGC,MARS-WEMA_270126;GTAACAGA,MARS-WEMA_270221;ACTAGGAA,MARS-WEMA_270316;GCATCC,MARS-WEMA_269945;ATACTGC,MARS-WEMA_270039;AGCTTGGT,MARS-WEMA_270135;CGCAACTT,MARS-WEMA_270230;CGTACC,MARS-WEMA_269953;GCGGCTA,MARS-WEMA_270047;ACAGATGA,MARS-WEMA_270143;TCGGTTGA,MARS-WEMA_270238;ATTCAGT,MARS-WEMA_269961;CGTTATA,MARS-WEMA_270055;CAGTTGGT,MARS-WEMA_270151;AATTCTGT,MARS-WEMA_270246;TATCTGA,MARS-WEMA_269969;TTAGACT,MARS-WEMA_270063;TGCAAGAA,MARS-WEMA_270159;CTAGAGTA,MARS-WEMA_270254;TTCAAGT,MARS-WEMA_269977;AGGTTAC,MARS-WEMA_270071;ACTCGAGA,MARS-WEMA_270167;GCGCGCAT,MARS-WEMA_270262;GAGCAGT,MARS-WEMA_269985;GGCAACT,MARS-WEMA_270079;GGAGCTGT,MARS-WEMA_270175;CGATTAGA,MARS-WEMA_270270;TCTAGGA,MARS-WEMA_269993;TCACCGA,MARS-WEMA_270087;CTGAGTGT,MARS-WEMA_270182;ATTCAGTT,MARS-WEMA_270278;ACACGGT,MARS-WEMA_270001;AAGGTTC,MARS-WEMA_270095;GATCAGAA,MARS-WEMA_270190;TTGACAAT,MARS-WEMA_270286;GACGTGA,MARS-WEMA_270009;CTAGCAT,MARS-WEMA_270103;TGCATAGA,MARS-WEMA_270198;TACGTTAA,MARS-WEMA_270293;TCATAGT,MARS-WEMA_270017;AGCTGCA,MARS-WEMA_270111;GAACGAAT,MARS-WEMA_270206;AGATACGA,MARS-WEMA_270301;TTACGAT,MARS-WEMA_270025;AGTACTT,MARS-WEMA_270119;TTGGCGGA,MARS-WEMA_270214;GCTGGATT,MARS-WEMA_270309;GGCTAGA,MARS-WEMA_270033;TAATTGC,MARS-WEMA_270127;CGCCGCAT,MARS-WEMA_270222;GACACCTT,MARS-WEMA_270317;AATCGTT,MARS-WEMA_269946;GCTGGAC,MARS-WEMA_270040;ACGTGTGT,MARS-WEMA_270136;CCGCCTAA,MARS-WEMA_270231;CTATGGA,MARS-WEMA_269954;GTCATCA,MARS-WEMA_270048;CAAGTGAA,MARS-WEMA_270144;TTCTTGGA,MARS-WEMA_270239;TACGGTA,MARS-WEMA_269962;CAGTGAC,MARS-WEMA_270056;GTTAACGA,MARS-WEMA_270152;CAACGCTT,MARS-WEMA_270247;ACTATGT,MARS-WEMA_269970;GCACACT,MARS-WEMA_270064;TCGTGGAT,MARS-WEMA_270160;AGCAGATA,MARS-WEMA_270255;CGTGAAT,MARS-WEMA_269978;AAGTCTT,MARS-WEMA_270072;AGCGATAA,MARS-WEMA_270168;TCTTAGGT,MARS-WEMA_270263;TTGCAGA,MARS-WEMA_269986;TGTATCA,MARS-WEMA_270080;CCACCAGT,MARS-WEMA_270176;GTGGCTAT,MARS-WEMA_270271;AACTTGT,MARS-WEMA_269994;CTGGAAC,MARS-WEMA_270088;GGCGTGTA,MARS-WEMA_270183;AGACTGAA,MARS-WEMA_270279;TGACGTA,MARS-WEMA_270002;ATTCGAC,MARS-WEMA_270096;AAGACAGT,MARS-WEMA_270191;CATAATGA,MARS-WEMA_270287;GCTATAA,MARS-WEMA_270010;CAAGATC,MARS-WEMA_270104;TTGTGCGA,MARS-WEMA_270199;GTGTCAGT,MARS-WEMA_270294;ATCGTAT,MARS-WEMA_270018;TCGCGCA,MARS-WEMA_270112;GAAGACAT,MARS-WEMA_270207;AGTGGCTT,MARS-WEMA_270302;TACTGAT,MARS-WEMA_270026;AGTGTGC,MARS-WEMA_270120;TGTCAAGA,MARS-WEMA_270215;CCACTGCA,MARS-WEMA_270310;CTTGAGA,Blank;GAATTCT,MARS-WEMA_270128;GCGAGGTT,MARS-WEMA_270223;TACAGGAT,MARS-WEMA_270318;)
description
Zea mays
http://purl.obolibrary.org/obo/NCBITaxon_4577
organism
pooled
http://www.ebi.ac.uk/efo/EFO_0000663
strain
Generic sample from Zea mays
title