SAMN01992953
External Id
University of Maryland School of Medicine, Institute for Genome Sciences
INSDC center name
2013-03-28T00:00:00Z
INSDC first public
2019-06-20T16:19:34.273Z
INSDC last update
live
INSDC status
MIGS.ba
NCBI submission model
MIGS.ba.5.0
NCBI submission package
1005528
NCBI taxon id
Velvet 1.1.04
assembly
2006
collection date
Keywords: GSC:MIxS;MIGS:5.0
description
terrestrial biome [ENVO:00000446]
environment (biome)
plant-associated habitat [ENVO:00009001]
environment (feature)
plant food product [ENVO:00002216]
environment (material)
180
finishing strategy (depth of coverage)
USA:New York
geo loc name
4679
host taxid
bacteria_archaea
investigation type
onion
misc_param: food source material
Escherichia coli EC4422
http://purl.obolibrary.org/obo/NCBITaxon_1005528
organism
Genomic anatomy of E.coli O157:H7 outbreaks: Insights into pathogenome evolution and population dynamics during the time-course of infection.
project name
Illumina
sequencing method
O157:H7
serotype
EC4422
strain
3
subspecific genetic lineage: clade
MIGS Cultured Bacterial/Archaeal sample from Escherichia coli EC4422 sample MS100013709
title