SAMN02142556
External Id
NxGenBio Life Sciences C-451, Yojna Vihar, Delhi-110092, India
INSDC center name
2014-05-08T00:00:00Z
INSDC first public
2019-09-18T14:15:16.520Z
INSDC last update
SRS464549
INSDC secondary accession
live
INSDC status
Generic
NCBI submission model
Generic.1.0
NCBI submission package
SRS464549
SRA accession
10 years
http://purl.obolibrary.org/obo/UO_0000036
age
Alizadeh & Tsao
authority
Indian Institute of Spices Research, Kozhikode, Kerala, India
biomaterial provider
Plantation
http://purl.obolibrary.org/obo/ENVO_00000117
biome
Black pepper spike
body site
2005-09-08
collection date
The Indian initiative of sequencing Phytophthora was taken up as part of the Outreach Project on Phytophthora, Fusarium, and Ralstonia, funded by IndianCouncil of Agricultural Research (ICAR). For this, native isolates of Phytophthora,(Isolate No. 05-06) infecting black pepper was completely sequenced using nextgeneration sequencing platforms, Roche 454 GSFLX+ & Illumina HiSeq™ 2000.
description
Mycelium
http://purl.obolibrary.org/obo/BTO_0001436
dev stage
Spike rot of Black pepper
disease
Advanced
disease_stage
India: Peruvannamuzhy
geo loc name
6-May
http://purl.obolibrary.org/obo/NCBITaxon_4577
isolate
Black pepper spike
isolation source
6-May
label
A1
http://www.ebi.ac.uk/efo/EFO_0006268
mating type
Phytophthora capsici
http://purl.obolibrary.org/obo/NCBITaxon_4784
organism
Black pepper
specific host
General Sample for Phytophthora capsici
title