SAMN01993015
External Id
University of Maryland School of Medicine, Institute for Genome Sciences
INSDC center name
2013-03-28T00:00:00Z
INSDC first public
2019-06-20T16:19:37.095Z
INSDC last update
live
INSDC status
MIGS.ba
NCBI submission model
MIGS.ba.5.0
NCBI submission package
1005566
NCBI taxon id
Velvet 1.2.01
assembly
stool
http://www.ebi.ac.uk/efo/EFO_0007874
body product
Keywords: GSC:MIxS;MIGS:5.0
description
terrestrial biome [ENVO:00000446]
environment (biome)
human-associated habitat [ENVO:00009003]
environment (feature)
feces [ENVO:00002003]
environment (material)
224.14
finishing strategy (depth of coverage)
Argentina
geo loc name
9606
host taxid
bacteria_archaea
investigation type
(SOR-, GUD+)
misc feature: metabolism
Escherichia coli 07798
http://purl.obolibrary.org/obo/NCBITaxon_1005566
organism
uidAmin, stx1min, stx2min, ehxAmin, STnew1
phenotype
Genomic anatomy of E.coli O157:H7 outbreaks: Insights into pathogenome evolution and population dynamics during the time-course of infection.
project name
Illumina
sequencing method
O157:H39
serotype
Homo sapiens
http://purl.obolibrary.org/obo/NCBITaxon_9606
specific host
7798
strain
MIGS Cultured Bacterial/Archaeal sample from Escherichia coli 07798 sample MS100013772
title