SAMN02086266
External Id
Cornell University
INSDC center name
2013-04-30T11:29:09.377Z
INSDC first public
2013-04-30T21:16:15.960Z
INSDC last update
SRS417485
INSDC secondary accession
live
INSDC status
Generic
NCBI submission model
Generic.1.0
NCBI submission package
SRS417485
SRA accession
This sample is a Genotyping-by-sequencing library with pooled individuals as described in http://www.maizegenetics.net/Table/Genotyping-By-Sequencing/. The restriction enzyme used for this library is ApeKI. Mapping between GBS barcodes and samples: (CTCC,PI550443;TGCA,Ames28423;ACTA,NSL67799;CAGA,PI606329;AACT,CML343;GCGT,PI221775;TGCGA,PI638551;CGAT,NSL437956;CGCTT,CIze38;TCACC,NSL438038;CTAGC,Ames28949;ACAAA,NSL438042;TTCTC,Ames19283;AGCCC,CIze90;GTATT,NSL30862;CTGTA,Ames28953;ACCGT,PI340869;GTAA,PI221785;GGTTGT,PI517974;CCAGCT,Ames26909;TTCAGA,NSL437948;TAGGAA,B73;GCTCTA,Ames26132;CCACAA,Ames27150;GCTTA,PI517972;CTTCCA,PI550469;GAGATA,PI607384;ATGCCT,CML358;TATTTTT,PI594049;CTTGCTT,Ames28417;ATGAAAC,PI406109;AAAAGTT,Ames28946;GAATTCA,CIze44;GAACTTC,Ames28945;GGACCTA,CML362;GTCGATT,blank;AACGCCT,CIze83;AATATGC,PI340839;ACGACTAC,Ames26123;GGTGT,Ames26776;TAGCATGC,Ames26028;AGTGGA,Ames20120;TAGGCCAT,PI601788;TGCAAGGA,PI550471;TGGTACGT,CML474;TCTCAGTC,PI200184;CCGGATAT,PI221741;CGCCTTAT,PI270297;AGGC,CIze27;GATC,PI601499;TCAC,NSL438037;AGGAT,PI340872;ATTGA,NSL437976;CATCT,NSL437930;CCTAC,CIze3;GAGGA,NSL30861;GGAAC,NSL438022;GTCAA,PI340876;TAATA,Ames22440;TACAT,NSL30904;TCGTT,PI340841;ACCTAA,Ames26763;ATATGT,SA24;ATCGTA,NSL437945;CATCGT,PI550463;CGCGGT,CIze317;CTATTA,NSL438021;GCCAGT,NSL437897;GGAAGA,Ames27121;GTACTT,CIze21;GTTGAA,NSL437943;TAACGA,Ames27188;TGGCTA,Ab26A;ACGTGTT,NSL438041;ATTAATT,PI601469;ATTGGAT,Ames26127;CATAAGT,Ames22026;CGCTGAT,CIze29;CGGTAGA,Ames27149;CTACGGA,PI641229;GCGGAAT,Ames26126;TAGCGGA,CIze28;TCGAAGA,PI644101;TCTGTGA,Ames28418;TGCTGGA,NSL67793;AACCGAGA,PI601439;ACAGGGAA,NSL437939;ACGTGGTA,Ames10260;CCATGGGT,NSL437923;CGCGGAGA,Ames19324;CGTGTGGT,NSL437932;GCTGTGGA,PI601568;GGATTGGT,Ames28991;GTGAGGGT,Ames28950;TATCGGGA,Ames28415;TTCCTGGA,PI506413;CTCC,PI550443;TGCA,Ames28423;ACTA,NSL67799;CAGA,PI606329;AACT,CML343;GCGT,PI221775;TGCGA,PI638551;CGAT,NSL437956;CGCTT,CIze38;TCACC,NSL438038;CTAGC,Ames28949;ACAAA,NSL438042;TTCTC,Ames19283;AGCCC,CIze90;GTATT,NSL30862;CTGTA,Ames28953;ACCGT,PI340869;GTAA,PI221785;GGTTGT,PI517974;CCAGCT,Ames26909;TTCAGA,NSL437948;TAGGAA,B73;GCTCTA,Ames26132;CCACAA,Ames27150;GCTTA,PI517972;CTTCCA,PI550469;GAGATA,PI607384;ATGCCT,CML358;TATTTTT,PI594049;CTTGCTT,Ames28417;ATGAAAC,PI406109;AAAAGTT,Ames28946;GAATTCA,CIze44;GAACTTC,Ames28945;GGACCTA,CML362;GTCGATT,blank;AACGCCT,CIze83;AATATGC,PI340839;ACGACTAC,Ames26123;GGTGT,Ames26776;TAGCATGC,Ames26028;AGTGGA,Ames20120;TAGGCCAT,PI601788;TGCAAGGA,PI550471;TGGTACGT,CML474;TCTCAGTC,PI200184;CCGGATAT,PI221741;CGCCTTAT,PI270297;AGGC,CIze27;GATC,PI601499;TCAC,NSL438037;AGGAT,PI340872;ATTGA,NSL437976;CATCT,NSL437930;CCTAC,CIze3;GAGGA,NSL30861;GGAAC,NSL438022;GTCAA,PI340876;TAATA,Ames22440;TACAT,NSL30904;TCGTT,PI340841;ACCTAA,Ames26763;ATATGT,SA24;ATCGTA,NSL437945;CATCGT,PI550463;CGCGGT,CIze317;CTATTA,NSL438021;GCCAGT,NSL437897;GGAAGA,Ames27121;GTACTT,CIze21;GTTGAA,NSL437943;TAACGA,Ames27188;TGGCTA,Ab26A;ACGTGTT,NSL438041;ATTAATT,PI601469;ATTGGAT,Ames26127;CATAAGT,Ames22026;CGCTGAT,CIze29;CGGTAGA,Ames27149;CTACGGA,PI641229;GCGGAAT,Ames26126;TAGCGGA,CIze28;TCGAAGA,PI644101;TCTGTGA,Ames28418;TGCTGGA,NSL67793;AACCGAGA,PI601439;ACAGGGAA,NSL437939;ACGTGGTA,Ames10260;CCATGGGT,NSL437923;CGCGGAGA,Ames19324;CGTGTGGT,NSL437932;GCTGTGGA,PI601568;GGATTGGT,Ames28991;GTGAGGGT,Ames28950;TATCGGGA,Ames28415;TTCCTGGA,PI506413;CTCC,PI550443;TGCA,Ames28423;ACTA,NSL67799;CAGA,PI606329;AACT,CML343;GCGT,PI221775;TGCGA,PI638551;CGAT,NSL437956;CGCTT,CIze38;TCACC,NSL438038;CTAGC,Ames28949;ACAAA,NSL438042;TTCTC,Ames19283;AGCCC,CIze90;GTATT,NSL30862;CTGTA,Ames28953;ACCGT,PI340869;GTAA,PI221785;GGTTGT,PI517974;CCAGCT,Ames26909;TTCAGA,NSL437948;TAGGAA,B73;GCTCTA,Ames26132;CCACAA,Ames27150;GCTTA,PI517972;CTTCCA,PI550469;GAGATA,PI607384;ATGCCT,CML358;TATTTTT,PI594049;CTTGCTT,Ames28417;ATGAAAC,PI406109;AAAAGTT,Ames28946;GAATTCA,CIze44;GAACTTC,Ames28945;GGACCTA,CML362;GTCGATT,blank;AACGCCT,CIze83;AATATGC,PI340839;ACGACTAC,Ames26123;GGTGT,Ames26776;TAGCATGC,Ames26028;AGTGGA,Ames20120;TAGGCCAT,PI601788;TGCAAGGA,PI550471;TGGTACGT,CML474;TCTCAGTC,PI200184;CCGGATAT,PI221741;CGCCTTAT,PI270297;AGGC,CIze27;GATC,PI601499;TCAC,NSL438037;AGGAT,PI340872;ATTGA,NSL437976;CATCT,NSL437930;CCTAC,CIze3;GAGGA,NSL30861;GGAAC,NSL438022;GTCAA,PI340876;TAATA,Ames22440;TACAT,NSL30904;TCGTT,PI340841;ACCTAA,Ames26763;ATATGT,SA24;ATCGTA,NSL437945;CATCGT,PI550463;CGCGGT,CIze317;CTATTA,NSL438021;GCCAGT,NSL437897;GGAAGA,Ames27121;GTACTT,CIze21;GTTGAA,NSL437943;TAACGA,Ames27188;TGGCTA,Ab26A;ACGTGTT,NSL438041;ATTAATT,PI601469;ATTGGAT,Ames26127;CATAAGT,Ames22026;CGCTGAT,CIze29;CGGTAGA,Ames27149;CTACGGA,PI641229;GCGGAAT,Ames26126;TAGCGGA,CIze28;TCGAAGA,PI644101;TCTGTGA,Ames28418;TGCTGGA,NSL67793;AACCGAGA,PI601439;ACAGGGAA,NSL437939;ACGTGGTA,Ames10260;CCATGGGT,NSL437923;CGCGGAGA,Ames19324;CGTGTGGT,NSL437932;GCTGTGGA,PI601568;GGATTGGT,Ames28991;GTGAGGGT,Ames28950;TATCGGGA,Ames28415;TTCCTGGA,PI506413;CTCC,PI550443;TGCA,Ames28423;ACTA,NSL67799;CAGA,PI606329;AACT,CML343;GCGT,PI221775;TGCGA,PI638551;CGAT,NSL437956;CGCTT,CIze38;TCACC,NSL438038;CTAGC,Ames28949;ACAAA,NSL438042;TTCTC,Ames19283;AGCCC,CIze90;GTATT,NSL30862;CTGTA,Ames28953;ACCGT,PI340869;GTAA,PI221785;GGTTGT,PI517974;CCAGCT,Ames26909;TTCAGA,NSL437948;TAGGAA,B73;GCTCTA,Ames26132;CCACAA,Ames27150;GCTTA,PI517972;CTTCCA,PI550469;GAGATA,PI607384;ATGCCT,CML358;TATTTTT,PI594049;CTTGCTT,Ames28417;ATGAAAC,PI406109;AAAAGTT,Ames28946;GAATTCA,CIze44;GAACTTC,Ames28945;GGACCTA,CML362;GTCGATT,blank;AACGCCT,CIze83;AATATGC,PI340839;ACGACTAC,Ames26123;GGTGT,Ames26776;TAGCATGC,Ames26028;AGTGGA,Ames20120;TAGGCCAT,PI601788;TGCAAGGA,PI550471;TGGTACGT,CML474;TCTCAGTC,PI200184;CCGGATAT,PI221741;CGCCTTAT,PI270297;AGGC,CIze27;GATC,PI601499;TCAC,NSL438037;AGGAT,PI340872;ATTGA,NSL437976;CATCT,NSL437930;CCTAC,CIze3;GAGGA,NSL30861;GGAAC,NSL438022;GTCAA,PI340876;TAATA,Ames22440;TACAT,NSL30904;TCGTT,PI340841;ACCTAA,Ames26763;ATATGT,SA24;ATCGTA,NSL437945;CATCGT,PI550463;CGCGGT,CIze317;CTATTA,NSL438021;GCCAGT,NSL437897;GGAAGA,Ames27121;GTACTT,CIze21;GTTGAA,NSL437943;TAACGA,Ames27188;TGGCTA,Ab26A;ACGTGTT,NSL438041;ATTAATT,PI601469;ATTGGAT,Ames26127;CATAAGT,Ames22026;CGCTGAT,CIze29;CGGTAGA,Ames27149;CTACGGA,PI641229;GCGGAAT,Ames26126;TAGCGGA,CIze28;TCGAAGA,PI644101;TCTGTGA,Ames28418;TGCTGGA,NSL67793;AACCGAGA,PI601439;ACAGGGAA,NSL437939;ACGTGGTA,Ames10260;CCATGGGT,NSL437923;CGCGGAGA,Ames19324;CGTGTGGT,NSL437932;GCTGTGGA,PI601568;GGATTGGT,Ames28991;GTGAGGGT,Ames28950;TATCGGGA,Ames28415;TTCCTGGA,PI506413;CTCC,PI550443;TGCA,Ames28423;ACTA,NSL67799;CAGA,PI606329;AACT,CML343;GCGT,PI221775;TGCGA,PI638551;CGAT,NSL437956;CGCTT,CIze38;TCACC,NSL438038;CTAGC,Ames28949;ACAAA,NSL438042;TTCTC,Ames19283;AGCCC,CIze90;GTATT,NSL30862;CTGTA,Ames28953;ACCGT,PI340869;GTAA,PI221785;GGTTGT,PI517974;CCAGCT,Ames26909;TTCAGA,NSL437948;TAGGAA,B73;GCTCTA,Ames26132;CCACAA,Ames27150;GCTTA,PI517972;CTTCCA,PI550469;GAGATA,PI607384;ATGCCT,CML358;TATTTTT,PI594049;CTTGCTT,Ames28417;ATGAAAC,PI406109;AAAAGTT,Ames28946;GAATTCA,CIze44;GAACTTC,Ames28945;GGACCTA,CML362;GTCGATT,blank;AACGCCT,CIze83;AATATGC,PI340839;ACGACTAC,Ames26123;GGTGT,Ames26776;TAGCATGC,Ames26028;AGTGGA,Ames20120;TAGGCCAT,PI601788;TGCAAGGA,PI550471;TGGTACGT,CML474;TCTCAGTC,PI200184;CCGGATAT,PI221741;CGCCTTAT,PI270297;AGGC,CIze27;GATC,PI601499;TCAC,NSL438037;AGGAT,PI340872;ATTGA,NSL437976;CATCT,NSL437930;CCTAC,CIze3;GAGGA,NSL30861;GGAAC,NSL438022;GTCAA,PI340876;TAATA,Ames22440;TACAT,NSL30904;TCGTT,PI340841;ACCTAA,Ames26763;ATATGT,SA24;ATCGTA,NSL437945;CATCGT,PI550463;CGCGGT,CIze317;CTATTA,NSL438021;GCCAGT,NSL437897;GGAAGA,Ames27121;GTACTT,CIze21;GTTGAA,NSL437943;TAACGA,Ames27188;TGGCTA,Ab26A;ACGTGTT,NSL438041;ATTAATT,PI601469;ATTGGAT,Ames26127;CATAAGT,Ames22026;CGCTGAT,CIze29;CGGTAGA,Ames27149;CTACGGA,PI641229;GCGGAAT,Ames26126;TAGCGGA,CIze28;TCGAAGA,PI644101;TCTGTGA,Ames28418;TGCTGGA,NSL67793;AACCGAGA,PI601439;ACAGGGAA,NSL437939;ACGTGGTA,Ames10260;CCATGGGT,NSL437923;CGCGGAGA,Ames19324;CGTGTGGT,NSL437932;GCTGTGGA,PI601568;GGATTGGT,Ames28991;GTGAGGGT,Ames28950;TATCGGGA,Ames28415;TTCCTGGA,PI506413;CTCC,PI550443;TGCA,Ames28423;ACTA,NSL67799;CAGA,PI606329;AACT,CML343;GCGT,PI221775;TGCGA,PI638551;CGAT,NSL437956;CGCTT,CIze38;TCACC,NSL438038;CTAGC,Ames28949;ACAAA,NSL438042;TTCTC,Ames19283;AGCCC,CIze90;GTATT,NSL30862;CTGTA,Ames28953;ACCGT,PI340869;GTAA,PI221785;GGTTGT,PI517974;CCAGCT,Ames26909;TTCAGA,NSL437948;TAGGAA,B73;GCTCTA,Ames26132;CCACAA,Ames27150;GCTTA,PI517972;CTTCCA,PI550469;GAGATA,PI607384;ATGCCT,CML358;TATTTTT,PI594049;CTTGCTT,Ames28417;ATGAAAC,PI406109;AAAAGTT,Ames28946;GAATTCA,CIze44;GAACTTC,Ames28945;GGACCTA,CML362;GTCGATT,blank;AACGCCT,CIze83;AATATGC,PI340839;ACGACTAC,Ames26123;GGTGT,Ames26776;TAGCATGC,Ames26028;AGTGGA,Ames20120;TAGGCCAT,PI601788;TGCAAGGA,PI550471;TGGTACGT,CML474;TCTCAGTC,PI200184;CCGGATAT,PI221741;CGCCTTAT,PI270297;AGGC,CIze27;GATC,PI601499;TCAC,NSL438037;AGGAT,PI340872;ATTGA,NSL437976;CATCT,NSL437930;CCTAC,CIze3;GAGGA,NSL30861;GGAAC,NSL438022;GTCAA,PI340876;TAATA,Ames22440;TACAT,NSL30904;TCGTT,PI340841;ACCTAA,Ames26763;ATATGT,SA24;ATCGTA,NSL437945;CATCGT,PI550463;CGCGGT,CIze317;CTATTA,NSL438021;GCCAGT,NSL437897;GGAAGA,Ames27121;GTACTT,CIze21;GTTGAA,NSL437943;TAACGA,Ames27188;TGGCTA,Ab26A;ACGTGTT,NSL438041;ATTAATT,PI601469;ATTGGAT,Ames26127;CATAAGT,Ames22026;CGCTGAT,CIze29;CGGTAGA,Ames27149;CTACGGA,PI641229;GCGGAAT,Ames26126;TAGCGGA,CIze28;TCGAAGA,PI644101;TCTGTGA,Ames28418;TGCTGGA,NSL67793;AACCGAGA,PI601439;ACAGGGAA,NSL437939;ACGTGGTA,Ames10260;CCATGGGT,NSL437923;CGCGGAGA,Ames19324;CGTGTGGT,NSL437932;GCTGTGGA,PI601568;GGATTGGT,Ames28991;GTGAGGGT,Ames28950;TATCGGGA,Ames28415;TTCCTGGA,PI506413;CTCC,PI550443;TGCA,Ames28423;ACTA,NSL67799;CAGA,PI606329;AACT,CML343;GCGT,PI221775;TGCGA,PI638551;CGAT,NSL437956;CGCTT,CIze38;TCACC,NSL438038;CTAGC,Ames28949;ACAAA,NSL438042;TTCTC,Ames19283;AGCCC,CIze90;GTATT,NSL30862;CTGTA,Ames28953;ACCGT,PI340869;GTAA,PI221785;GGTTGT,PI517974;CCAGCT,Ames26909;TTCAGA,NSL437948;TAGGAA,B73;GCTCTA,Ames26132;CCACAA,Ames27150;GCTTA,PI517972;CTTCCA,PI550469;GAGATA,PI607384;ATGCCT,CML358;TATTTTT,PI594049;CTTGCTT,Ames28417;ATGAAAC,PI406109;AAAAGTT,Ames28946;GAATTCA,CIze44;GAACTTC,Ames28945;GGACCTA,CML362;GTCGATT,blank;AACGCCT,CIze83;AATATGC,PI340839;ACGACTAC,Ames26123;GGTGT,Ames26776;TAGCATGC,Ames26028;AGTGGA,Ames20120;TAGGCCAT,PI601788;TGCAAGGA,PI550471;TGGTACGT,CML474;TCTCAGTC,PI200184;CCGGATAT,PI221741;CGCCTTAT,PI270297;AGGC,CIze27;GATC,PI601499;TCAC,NSL438037;AGGAT,PI340872;ATTGA,NSL437976;CATCT,NSL437930;CCTAC,CIze3;GAGGA,NSL30861;GGAAC,NSL438022;GTCAA,PI340876;TAATA,Ames22440;TACAT,NSL30904;TCGTT,PI340841;ACCTAA,Ames26763;ATATGT,SA24;ATCGTA,NSL437945;CATCGT,PI550463;CGCGGT,CIze317;CTATTA,NSL438021;GCCAGT,NSL437897;GGAAGA,Ames27121;GTACTT,CIze21;GTTGAA,NSL437943;TAACGA,Ames27188;TGGCTA,Ab26A;ACGTGTT,NSL438041;ATTAATT,PI601469;ATTGGAT,Ames26127;CATAAGT,Ames22026;CGCTGAT,CIze29;CGGTAGA,Ames27149;CTACGGA,PI641229;GCGGAAT,Ames26126;TAGCGGA,CIze28;TCGAAGA,PI644101;TCTGTGA,Ames28418;TGCTGGA,NSL67793;AACCGAGA,PI601439;ACAGGGAA,NSL437939;ACGTGGTA,Ames10260;CCATGGGT,NSL437923;CGCGGAGA,Ames19324;CGTGTGGT,NSL437932;GCTGTGGA,PI601568;GGATTGGT,Ames28991;GTGAGGGT,Ames28950;TATCGGGA,Ames28415;TTCCTGGA,PI506413;)
description
Zea mays
http://purl.obolibrary.org/obo/NCBITaxon_4577
organism
pooled
http://www.ebi.ac.uk/efo/EFO_0000663
strain
Generic sample from Zea mays
title