SAMN02116944
External Id
Cornell University
INSDC center name
2013-05-03T12:23:49.163Z
INSDC first public
2013-05-05T23:00:13.657Z
INSDC last update
SRS418516
INSDC secondary accession
live
INSDC status
Generic
NCBI submission model
Generic.1.0
NCBI submission package
SRS418516
SRA accession
This sample is a Genotyping-by-sequencing library with pooled individuals as described in http://www.maizegenetics.net/Table/Genotyping-By-Sequencing/. The restriction enzyme used for this library is ApeKI. Mapping between GBS barcodes and samples: (CTCC,SW796.06;TGCA,SW64.10;ACTA,ECS-1.06;CAGA,High Tide.02;AACT,ECS-11.05;GCGT,SW38.02;TGCGA,ECS-11.04;CGAT,SW50.01;CGCTT,SW787.02;TCACC,SW114.01;CTAGC,High Tide.03;ACAAA,SW124.08;TTCTC,SW112.07;AGCCC,ECS-1.05;GTATT,Cave-in-Rock.06;CTGTA,SW795.06;ACCGT,SW58.05;GTAA,SW43.04;GGTTGT,SW40.09;CCAGCT,Sunburst.04;TTCAGA,SW58.01;TAGGAA,WS4U.09;GCTCTA,SW787.05;CCACAA,SW112.08;GCTTA,SW787.09;CTTCCA,SW122.06;GAGATA,SW63.06;ATGCCT,SW109.10;TATTTTT,ECS-12.04;CTTGCTT,SW805.01;ATGAAAC,SW65.07;AAAAGTT,SW127.08;GAATTCA,ECS-11.02;GAACTTC,SW803.08;GGACCTA,SW109.01;GTCGATT,SW787.10;AACGCCT,SW790.06;AATATGC,SW799.07;ACGACTAC,SW40.02;GGTGT,SW116.03;TAGCATGC,SW782.09;TAGCATGC,SW782.09;AGTGGA,SW128.02;TAGGCCAT,SW124.03;TGCAAGGA,ECS-10.01;TGGTACGT,SW797.09;TCTCAGTC,Dacotah.03;CCGGATAT,SW114.03;CGCCTTAT,SW65.03;AGGC,Sunburst.10;GATC,SW806.03;TCAC,SW46.04;AGGAT,SW809.01;CATCT,SW123.08;CCTAC,Blank;GAGGA,SW63.05;GGAAC,ECS-12.07;GTCAA,WS4U.08;TAATA,SW809.04;TACAT,SW787.03;TCGTT,SW786.09;ACCTAA,KY1625.08;ATATGT,SW786.03;ATCGTA,SW808.01;CATCGT,ECS-11.07;CGCGGT,SW31.04;CTATTA,SW64.08;GCCAGT,SW46.08;GGAAGA,SW124.01;GTACTT,KY1625.07;GTTGAA,SW788.10;TAACGA,SWG39.08;TGGCTA,Blackwell.08;ACGTGTT,SW114.08;ATTAATT,SW58.06;ATTGGAT,SW802.04;CATAAGT,SW798.09;CGCTGAT,Sunburst.08;CGGTAGA,High Tide.10;CTACGGA,SW808.04;GCGGAAT,SW115.02;TAGCGGA,Carthage.02;TCGAAGA,SW797.04;TCTGTGA,Kanlow.07;TGCTGGA,SW129.01;AACCGAGA,SW809.09;ACAGGGAA,SW33.06;ACGTGGTA,WS98-SB.01;CCATGGGT,Sunburst.05;CGCGGAGA,ECS-2.04;CGTGTGGT,High Tide.05;GCTGTGGA,SW116.09;GGATTGGT,Cave-in-Rock.02;GTGAGGGT,ECS-12.05;TATCGGGA,SW808.02;TTCCTGGA,SW802.05;)
description
Panicum virgatum
http://purl.obolibrary.org/obo/NCBITaxon_38727
organism
pooled
http://www.ebi.ac.uk/efo/EFO_0000663
strain
Generic sample from Panicum virgatum
title