SAMN02251076
External Id
University Laval
INSDC center name
2013-10-01T00:00:00Z
INSDC first public
2021-02-28T02:07:45.604Z
INSDC last update
SRS458316
INSDC secondary accession
live
INSDC status
MIMS.me
NCBI submission model
MIGS/MIMS/MIMARKS.water
NCBI submission model
MIMS.me.water.5.0
NCBI submission package
SRS458316
SRA accession
Marine
biome
2009-09-08
collection date
2.5m
depth
Free-Living 08SEP09 late summer
description
Free-Living 25AUG09 late summer
description
MIGS/MIMS/MIMARKS.water
env package
TRUE
environ_sample
Coastal lagoon
feature
B969F (ACGCGHNRAACCTTACC)
fwd_PCR_primer
Canada: Gulf of St Lawrence,Magdalen Islands, Havre-aux-Maisons lagoon
geo loc name
metagenome
investigation type
47.46 N 61.82 W
lat lon
Water
http://purl.obolibrary.org/obo/CHEBI_15377
material
ATATCGCGAG
mid
marine metagenome
http://purl.obolibrary.org/obo/NCBITaxon_408172
organism
Attached and Free-Living Bacteria in a temperate coastal lagoon
project name
DNA
ref_biomaterial
Aerobic
http://purl.obolibrary.org/obo/EO_0007024
rel_to_oxygen
BA1406R (ACGGGCRGTGWGTRCAA)
rev_PCR_primer
30.8
salinity
Filtration
samp mat process
submersible electric pump
samp_collect_device
-80 degC
samp_store_temp
1.5 - 2L
http://www.ebi.ac.uk/efo/EFO_0002225
sample size
Pyrosequencing
seq meth
MERINOV experimental site
site
0.22µm pore-size sterivex
source_mat_id
16S rRNA gene
target gene
21
temp
MIMS Environmental/Metagenome sample from marine metagenome
title