SAMN02086265
External Id
Cornell University
INSDC center name
2013-04-30T11:29:09.753Z
INSDC first public
2013-04-30T21:16:15.333Z
INSDC last update
SRS417484
INSDC secondary accession
live
INSDC status
Generic
NCBI submission model
Generic.1.0
NCBI submission package
SRS417484
SRA accession
This sample is a Genotyping-by-sequencing library with pooled individuals as described in http://www.maizegenetics.net/Table/Genotyping-By-Sequencing/. The restriction enzyme used for this library is ApeKI. Mapping between GBS barcodes and samples: (CTCC,PI597927;TGCA,NSL437914;ACTA,PI550467;CAGA,Ames27158;AACT,NSL437947;GCGT,Ames28996;TGCGA,PI542953;CGAT,NSL438005;CGCTT,Ames10263;TCACC,Ames27158;CTAGC,PI221773;ACAAA,Ames28421;TTCTC,PI550469;AGCCC,Ames20136;GTATT,Ames26131;CTGTA,PI601497;ACCGT,Ames26124;GTAA,Ames27154;GGTTGT,Ames22027;CCAGCT,NSL437962;TTCAGA,NSL437968;TAGGAA,Tx303;GCTCTA,Ames22440;CCACAA,Ames20137;GCTTA,NSL438029;CTTCCA,NSL437878;GAGATA,CIze88;ATGCCT,PI638552;TATTTTT,PI527700;CTTGCTT,NSL67798;ATGAAAC,B73;AAAAGTT,NSL437909;GAATTCA,Ames28989;GAACTTC,Ames28938;GGACCTA,CML210;GTCGATT,PI632746;AACGCCT,NSL30863;AATATGC,CML450;ACGACTAC,PI601441;GGTGT,CML50;TAGCATGC,PI615190;AGTGGA,PI587147;TAGGCCAT,Ames26773;TGCAAGGA,PI340838;TGGTACGT,NSL438030;TCTCAGTC,PI506412;CCGGATAT,CML482;CGCCTTAT,PI340842;AGGC,PI608778;GATC,CIze127;TCAC,PI597926;AGGAT,Ames28997;ATTGA,NSL22634;CATCT,Ames28935;CCTAC,Ames26129;GAGGA,Ames26770;GGAAC,NSL437988;GTCAA,PI198892;TAATA,Ames27177;TACAT,PI597927;TCGTT,PI631444;ACCTAA,CIze85;ATATGT,IL14H;ATCGTA,PI186231;CATCGT,blank;CGCGGT,NSL437896;CTATTA,Ames26116;GCCAGT,Ames27167;GGAAGA,Ames22014;GTACTT,NSL437920;GTTGAA,SA24;TAACGA,Ames28951;TGGCTA,Ames27109;ACGTGTT,CIze44;ATTAATT,NSL438007;ATTGGAT,Ames28993;CATAAGT,Ames28933;CGCTGAT,PI340847;CGGTAGA,Ames28932;CTACGGA,NSL437929;GCGGAAT,NSL438009;TAGCGGA,CIze64;TCGAAGA,NSL438013;TCTGTGA,PI583847;TGCTGGA,PI531083;AACCGAGA,Ames28414;ACAGGGAA,Ames26122;ACGTGGTA,Ames24575;CCATGGGT,NSL438036;CGCGGAGA,Ames28361;CGTGTGGT,Ames26782;GCTGTGGA,PI540312;GGATTGGT,NSL438008;GTGAGGGT,PI601500;TATCGGGA,NSL437935;TTCCTGGA,Ames22012;CTCC,PI597927;TGCA,NSL437914;ACTA,PI550467;CAGA,Ames27158;AACT,NSL437947;GCGT,Ames28996;TGCGA,PI542953;CGAT,NSL438005;CGCTT,Ames10263;TCACC,Ames27158;CTAGC,PI221773;ACAAA,Ames28421;TTCTC,PI550469;AGCCC,Ames20136;GTATT,Ames26131;CTGTA,PI601497;ACCGT,Ames26124;GTAA,Ames27154;GGTTGT,Ames22027;CCAGCT,NSL437962;TTCAGA,NSL437968;TAGGAA,Tx303;GCTCTA,Ames22440;CCACAA,Ames20137;GCTTA,NSL438029;CTTCCA,NSL437878;GAGATA,CIze88;ATGCCT,PI638552;TATTTTT,PI527700;CTTGCTT,NSL67798;ATGAAAC,B73;AAAAGTT,NSL437909;GAATTCA,Ames28989;GAACTTC,Ames28938;GGACCTA,CML210;GTCGATT,PI632746;AACGCCT,NSL30863;AATATGC,CML450;ACGACTAC,PI601441;GGTGT,CML50;TAGCATGC,PI615190;AGTGGA,PI587147;TAGGCCAT,Ames26773;TGCAAGGA,PI340838;TGGTACGT,NSL438030;TCTCAGTC,PI506412;CCGGATAT,CML482;CGCCTTAT,PI340842;AGGC,PI608778;GATC,CIze127;TCAC,PI597926;AGGAT,Ames28997;ATTGA,NSL22634;CATCT,Ames28935;CCTAC,Ames26129;GAGGA,Ames26770;GGAAC,NSL437988;GTCAA,PI198892;TAATA,Ames27177;TACAT,PI597927;TCGTT,PI631444;ACCTAA,CIze85;ATATGT,IL14H;ATCGTA,PI186231;CATCGT,blank;CGCGGT,NSL437896;CTATTA,Ames26116;GCCAGT,Ames27167;GGAAGA,Ames22014;GTACTT,NSL437920;GTTGAA,SA24;TAACGA,Ames28951;TGGCTA,Ames27109;ACGTGTT,CIze44;ATTAATT,NSL438007;ATTGGAT,Ames28993;CATAAGT,Ames28933;CGCTGAT,PI340847;CGGTAGA,Ames28932;CTACGGA,NSL437929;GCGGAAT,NSL438009;TAGCGGA,CIze64;TCGAAGA,NSL438013;TCTGTGA,PI583847;TGCTGGA,PI531083;AACCGAGA,Ames28414;ACAGGGAA,Ames26122;ACGTGGTA,Ames24575;CCATGGGT,NSL438036;CGCGGAGA,Ames28361;CGTGTGGT,Ames26782;GCTGTGGA,PI540312;GGATTGGT,NSL438008;GTGAGGGT,PI601500;TATCGGGA,NSL437935;TTCCTGGA,Ames22012;CTCC,PI597927;TGCA,NSL437914;ACTA,PI550467;CAGA,Ames27158;AACT,NSL437947;GCGT,Ames28996;TGCGA,PI542953;CGAT,NSL438005;CGCTT,Ames10263;TCACC,Ames27158;CTAGC,PI221773;ACAAA,Ames28421;TTCTC,PI550469;AGCCC,Ames20136;GTATT,Ames26131;CTGTA,PI601497;ACCGT,Ames26124;GTAA,Ames27154;GGTTGT,Ames22027;CCAGCT,NSL437962;TTCAGA,NSL437968;TAGGAA,Tx303;GCTCTA,Ames22440;CCACAA,Ames20137;GCTTA,NSL438029;CTTCCA,NSL437878;GAGATA,CIze88;ATGCCT,PI638552;TATTTTT,PI527700;CTTGCTT,NSL67798;ATGAAAC,B73;AAAAGTT,NSL437909;GAATTCA,Ames28989;GAACTTC,Ames28938;GGACCTA,CML210;GTCGATT,PI632746;AACGCCT,NSL30863;AATATGC,CML450;ACGACTAC,PI601441;GGTGT,CML50;TAGCATGC,PI615190;AGTGGA,PI587147;TAGGCCAT,Ames26773;TGCAAGGA,PI340838;TGGTACGT,NSL438030;TCTCAGTC,PI506412;CCGGATAT,CML482;CGCCTTAT,PI340842;AGGC,PI608778;GATC,CIze127;TCAC,PI597926;AGGAT,Ames28997;ATTGA,NSL22634;CATCT,Ames28935;CCTAC,Ames26129;GAGGA,Ames26770;GGAAC,NSL437988;GTCAA,PI198892;TAATA,Ames27177;TACAT,PI597927;TCGTT,PI631444;ACCTAA,CIze85;ATATGT,IL14H;ATCGTA,PI186231;CATCGT,blank;CGCGGT,NSL437896;CTATTA,Ames26116;GCCAGT,Ames27167;GGAAGA,Ames22014;GTACTT,NSL437920;GTTGAA,SA24;TAACGA,Ames28951;TGGCTA,Ames27109;ACGTGTT,CIze44;ATTAATT,NSL438007;ATTGGAT,Ames28993;CATAAGT,Ames28933;CGCTGAT,PI340847;CGGTAGA,Ames28932;CTACGGA,NSL437929;GCGGAAT,NSL438009;TAGCGGA,CIze64;TCGAAGA,NSL438013;TCTGTGA,PI583847;TGCTGGA,PI531083;AACCGAGA,Ames28414;ACAGGGAA,Ames26122;ACGTGGTA,Ames24575;CCATGGGT,NSL438036;CGCGGAGA,Ames28361;CGTGTGGT,Ames26782;GCTGTGGA,PI540312;GGATTGGT,NSL438008;GTGAGGGT,PI601500;TATCGGGA,NSL437935;TTCCTGGA,Ames22012;CTCC,PI597927;TGCA,NSL437914;ACTA,PI550467;CAGA,Ames27158;AACT,NSL437947;GCGT,Ames28996;TGCGA,PI542953;CGAT,NSL438005;CGCTT,Ames10263;TCACC,Ames27158;CTAGC,PI221773;ACAAA,Ames28421;TTCTC,PI550469;AGCCC,Ames20136;GTATT,Ames26131;CTGTA,PI601497;ACCGT,Ames26124;GTAA,Ames27154;GGTTGT,Ames22027;CCAGCT,NSL437962;TTCAGA,NSL437968;TAGGAA,Tx303;GCTCTA,Ames22440;CCACAA,Ames20137;GCTTA,NSL438029;CTTCCA,NSL437878;GAGATA,CIze88;ATGCCT,PI638552;TATTTTT,PI527700;CTTGCTT,NSL67798;ATGAAAC,B73;AAAAGTT,NSL437909;GAATTCA,Ames28989;GAACTTC,Ames28938;GGACCTA,CML210;GTCGATT,PI632746;AACGCCT,NSL30863;AATATGC,CML450;ACGACTAC,PI601441;GGTGT,CML50;TAGCATGC,PI615190;AGTGGA,PI587147;TAGGCCAT,Ames26773;TGCAAGGA,PI340838;TGGTACGT,NSL438030;TCTCAGTC,PI506412;CCGGATAT,CML482;CGCCTTAT,PI340842;AGGC,PI608778;GATC,CIze127;TCAC,PI597926;AGGAT,Ames28997;ATTGA,NSL22634;CATCT,Ames28935;CCTAC,Ames26129;GAGGA,Ames26770;GGAAC,NSL437988;GTCAA,PI198892;TAATA,Ames27177;TACAT,PI597927;TCGTT,PI631444;ACCTAA,CIze85;ATATGT,IL14H;ATCGTA,PI186231;CATCGT,blank;CGCGGT,NSL437896;CTATTA,Ames26116;GCCAGT,Ames27167;GGAAGA,Ames22014;GTACTT,NSL437920;GTTGAA,SA24;TAACGA,Ames28951;TGGCTA,Ames27109;ACGTGTT,CIze44;ATTAATT,NSL438007;ATTGGAT,Ames28993;CATAAGT,Ames28933;CGCTGAT,PI340847;CGGTAGA,Ames28932;CTACGGA,NSL437929;GCGGAAT,NSL438009;TAGCGGA,CIze64;TCGAAGA,NSL438013;TCTGTGA,PI583847;TGCTGGA,PI531083;AACCGAGA,Ames28414;ACAGGGAA,Ames26122;ACGTGGTA,Ames24575;CCATGGGT,NSL438036;CGCGGAGA,Ames28361;CGTGTGGT,Ames26782;GCTGTGGA,PI540312;GGATTGGT,NSL438008;GTGAGGGT,PI601500;TATCGGGA,NSL437935;TTCCTGGA,Ames22012;CTCC,PI597927;TGCA,NSL437914;ACTA,PI550467;CAGA,Ames27158;AACT,NSL437947;GCGT,Ames28996;TGCGA,PI542953;CGAT,NSL438005;CGCTT,Ames10263;TCACC,Ames27158;CTAGC,PI221773;ACAAA,Ames28421;TTCTC,PI550469;AGCCC,Ames20136;GTATT,Ames26131;CTGTA,PI601497;ACCGT,Ames26124;GTAA,Ames27154;GGTTGT,Ames22027;CCAGCT,NSL437962;TTCAGA,NSL437968;TAGGAA,Tx303;GCTCTA,Ames22440;CCACAA,Ames20137;GCTTA,NSL438029;CTTCCA,NSL437878;GAGATA,CIze88;ATGCCT,PI638552;TATTTTT,PI527700;CTTGCTT,NSL67798;ATGAAAC,B73;AAAAGTT,NSL437909;GAATTCA,Ames28989;GAACTTC,Ames28938;GGACCTA,CML210;GTCGATT,PI632746;AACGCCT,NSL30863;AATATGC,CML450;ACGACTAC,PI601441;GGTGT,CML50;TAGCATGC,PI615190;AGTGGA,PI587147;TAGGCCAT,Ames26773;TGCAAGGA,PI340838;TGGTACGT,NSL438030;TCTCAGTC,PI506412;CCGGATAT,CML482;CGCCTTAT,PI340842;AGGC,PI608778;GATC,CIze127;TCAC,PI597926;AGGAT,Ames28997;ATTGA,NSL22634;CATCT,Ames28935;CCTAC,Ames26129;GAGGA,Ames26770;GGAAC,NSL437988;GTCAA,PI198892;TAATA,Ames27177;TACAT,PI597927;TCGTT,PI631444;ACCTAA,CIze85;ATATGT,IL14H;ATCGTA,PI186231;CATCGT,blank;CGCGGT,NSL437896;CTATTA,Ames26116;GCCAGT,Ames27167;GGAAGA,Ames22014;GTACTT,NSL437920;GTTGAA,SA24;TAACGA,Ames28951;TGGCTA,Ames27109;ACGTGTT,CIze44;ATTAATT,NSL438007;ATTGGAT,Ames28993;CATAAGT,Ames28933;CGCTGAT,PI340847;CGGTAGA,Ames28932;CTACGGA,NSL437929;GCGGAAT,NSL438009;TAGCGGA,CIze64;TCGAAGA,NSL438013;TCTGTGA,PI583847;TGCTGGA,PI531083;AACCGAGA,Ames28414;ACAGGGAA,Ames26122;ACGTGGTA,Ames24575;CCATGGGT,NSL438036;CGCGGAGA,Ames28361;CGTGTGGT,Ames26782;GCTGTGGA,PI540312;GGATTGGT,NSL438008;GTGAGGGT,PI601500;TATCGGGA,NSL437935;TTCCTGGA,Ames22012;CTCC,PI597927;TGCA,NSL437914;ACTA,PI550467;CAGA,Ames27158;AACT,NSL437947;GCGT,Ames28996;TGCGA,PI542953;CGAT,NSL438005;CGCTT,Ames10263;TCACC,Ames27158;CTAGC,PI221773;ACAAA,Ames28421;TTCTC,PI550469;AGCCC,Ames20136;GTATT,Ames26131;CTGTA,PI601497;ACCGT,Ames26124;GTAA,Ames27154;GGTTGT,Ames22027;CCAGCT,NSL437962;TTCAGA,NSL437968;TAGGAA,Tx303;GCTCTA,Ames22440;CCACAA,Ames20137;GCTTA,NSL438029;CTTCCA,NSL437878;GAGATA,CIze88;ATGCCT,PI638552;TATTTTT,PI527700;CTTGCTT,NSL67798;ATGAAAC,B73;AAAAGTT,NSL437909;GAATTCA,Ames28989;GAACTTC,Ames28938;GGACCTA,CML210;GTCGATT,PI632746;AACGCCT,NSL30863;AATATGC,CML450;ACGACTAC,PI601441;GGTGT,CML50;TAGCATGC,PI615190;AGTGGA,PI587147;TAGGCCAT,Ames26773;TGCAAGGA,PI340838;TGGTACGT,NSL438030;TCTCAGTC,PI506412;CCGGATAT,CML482;CGCCTTAT,PI340842;AGGC,PI608778;GATC,CIze127;TCAC,PI597926;AGGAT,Ames28997;ATTGA,NSL22634;CATCT,Ames28935;CCTAC,Ames26129;GAGGA,Ames26770;GGAAC,NSL437988;GTCAA,PI198892;TAATA,Ames27177;TACAT,PI597927;TCGTT,PI631444;ACCTAA,CIze85;ATATGT,IL14H;ATCGTA,PI186231;CATCGT,blank;CGCGGT,NSL437896;CTATTA,Ames26116;GCCAGT,Ames27167;GGAAGA,Ames22014;GTACTT,NSL437920;GTTGAA,SA24;TAACGA,Ames28951;TGGCTA,Ames27109;ACGTGTT,CIze44;ATTAATT,NSL438007;ATTGGAT,Ames28993;CATAAGT,Ames28933;CGCTGAT,PI340847;CGGTAGA,Ames28932;CTACGGA,NSL437929;GCGGAAT,NSL438009;TAGCGGA,CIze64;TCGAAGA,NSL438013;TCTGTGA,PI583847;TGCTGGA,PI531083;AACCGAGA,Ames28414;ACAGGGAA,Ames26122;ACGTGGTA,Ames24575;CCATGGGT,NSL438036;CGCGGAGA,Ames28361;CGTGTGGT,Ames26782;GCTGTGGA,PI540312;GGATTGGT,NSL438008;GTGAGGGT,PI601500;TATCGGGA,NSL437935;TTCCTGGA,Ames22012;CTCC,PI597927;TGCA,NSL437914;ACTA,PI550467;CAGA,Ames27158;AACT,NSL437947;GCGT,Ames28996;TGCGA,PI542953;CGAT,NSL438005;CGCTT,Ames10263;TCACC,Ames27158;CTAGC,PI221773;ACAAA,Ames28421;TTCTC,PI550469;AGCCC,Ames20136;GTATT,Ames26131;CTGTA,PI601497;ACCGT,Ames26124;GTAA,Ames27154;GGTTGT,Ames22027;CCAGCT,NSL437962;TTCAGA,NSL437968;TAGGAA,Tx303;GCTCTA,Ames22440;CCACAA,Ames20137;GCTTA,NSL438029;CTTCCA,NSL437878;GAGATA,CIze88;ATGCCT,PI638552;TATTTTT,PI527700;CTTGCTT,NSL67798;ATGAAAC,B73;AAAAGTT,NSL437909;GAATTCA,Ames28989;GAACTTC,Ames28938;GGACCTA,CML210;GTCGATT,PI632746;AACGCCT,NSL30863;AATATGC,CML450;ACGACTAC,PI601441;GGTGT,CML50;TAGCATGC,PI615190;AGTGGA,PI587147;TAGGCCAT,Ames26773;TGCAAGGA,PI340838;TGGTACGT,NSL438030;TCTCAGTC,PI506412;CCGGATAT,CML482;CGCCTTAT,PI340842;AGGC,PI608778;GATC,CIze127;TCAC,PI597926;AGGAT,Ames28997;ATTGA,NSL22634;CATCT,Ames28935;CCTAC,Ames26129;GAGGA,Ames26770;GGAAC,NSL437988;GTCAA,PI198892;TAATA,Ames27177;TACAT,PI597927;TCGTT,PI631444;ACCTAA,CIze85;ATATGT,IL14H;ATCGTA,PI186231;CATCGT,blank;CGCGGT,NSL437896;CTATTA,Ames26116;GCCAGT,Ames27167;GGAAGA,Ames22014;GTACTT,NSL437920;GTTGAA,SA24;TAACGA,Ames28951;TGGCTA,Ames27109;ACGTGTT,CIze44;ATTAATT,NSL438007;ATTGGAT,Ames28993;CATAAGT,Ames28933;CGCTGAT,PI340847;CGGTAGA,Ames28932;CTACGGA,NSL437929;GCGGAAT,NSL438009;TAGCGGA,CIze64;TCGAAGA,NSL438013;TCTGTGA,PI583847;TGCTGGA,PI531083;AACCGAGA,Ames28414;ACAGGGAA,Ames26122;ACGTGGTA,Ames24575;CCATGGGT,NSL438036;CGCGGAGA,Ames28361;CGTGTGGT,Ames26782;GCTGTGGA,PI540312;GGATTGGT,NSL438008;GTGAGGGT,PI601500;TATCGGGA,NSL437935;TTCCTGGA,Ames22012;)
description
Zea mays
http://purl.obolibrary.org/obo/NCBITaxon_4577
organism
pooled
http://www.ebi.ac.uk/efo/EFO_0000663
strain
Generic sample from Zea mays
title