SAMD00013549
External Id
Medical Mycology Research Center
INSDC center name
2014-03-28T00:00:00Z
INSDC first public
2021-05-25T22:12:08Z
INSDC last update
DRS013324
INSDC secondary accession
live
INSDC status
Generic
NCBI submission model
Generic.1.0
NCBI submission package
DRS013324
SRA accession
2012-05
collection date
29M
estimated size
Japan:Chiba
geo loc name
Homo sapiens
http://purl.obolibrary.org/obo/NCBITaxon_9606
host
Chronic pulmonary aspergillosis (CPA)
host_disease_stat
35.60472 N 140.12333 E
lat lon
8
num_replicons
Aspergillus fumigatus var. fumigatus
http://purl.obolibrary.org/obo/NCBITaxon_41122
organism
1
ploidy
asexual
propagation
Aspergillus fumigatus is the most important pathogenic fungus among Aspergillus species associated with aspergillosis. Of the various presentations of aspergillosis, pulmonary aspergilloma (PA) is one of the most common forms of pulmonary involvement by A. fumigatus, which is a fungus ball composed of fungal hyphae, inflammatory cells, fibrin, mucus and tissue debris. Chronic necrotizing pulmonary aspergillosis (CNPA), also known as semi-invasive or invasive aspergillosis, is locally invasive and predominantly seen in patients with mild immunodeficiency or with a chronic lung disease. In this project, in order to elucidate the genetic variations related with pathological conditions, we performed whole genome shutgun sequence for 17 strains isolated from patients in Japan.
sample comment
DRS013324
sample name
BALF
source_material_id
IFM 61407
strain
IFM 61407
title
fumigatus
variety