SAMN02116471
External Id
Cornell University
INSDC center name
2013-05-03T12:29:24.240Z
INSDC first public
2013-05-06T14:10:28.893Z
INSDC last update
SRS418829
INSDC secondary accession
live
INSDC status
Generic
NCBI submission model
Generic.1.0
NCBI submission package
SRS418829
SRA accession
This sample is a Genotyping-by-sequencing library with pooled individuals as described in http://www.maizegenetics.net/Table/Genotyping-By-Sequencing/. The restriction enzyme used for this library is ApeKI. Mapping between GBS barcodes and samples: (AGGC,MARS-WEMA_271272;TCAAGTT,MARS-WEMA_271367;ATGACGC,MARS-WEMA_271462;CGCTTGAA,MARS-WEMA_271557;GATT,MARS-WEMA_271280;GATCATA,MARS-WEMA_271375;TATTGCA,MARS-WEMA_271470;ATCGGTGT,MARS-WEMA_271565;CGAA,MARS-WEMA_271288;GCATTGA,MARS-WEMA_271382;GGATATC,MARS-WEMA_271478;CCTACCGA,MARS-WEMA_271573;GTCC,MARS-WEMA_271296;CAGGTAT,MARS-WEMA_271390;CCGAGCT,MARS-WEMA_271486;GGACAATA,MARS-WEMA_271581;ACAT,MARS-WEMA_271304;TGCAATA,MARS-WEMA_271398;TTGATAC,MARS-WEMA_271494;AACGGAAT,MARS-WEMA_271588;GCGA,MARS-WEMA_271312;ATATCGT,MARS-WEMA_271406;CACGACT,MARS-WEMA_271502;TCGATGGT,MARS-WEMA_271596;TGCT,Blank;AGTCTAT,MARS-WEMA_271414;ATCTAGC,MARS-WEMA_271510;GTTCATTA,MARS-WEMA_271604;CCTC,MARS-WEMA_271327;GTCTGAA,MARS-WEMA_271422;TGAATTC,MARS-WEMA_271518;GAATCGAA,MARS-WEMA_271612;AACA,MARS-WEMA_271335;ATCAGTT,MARS-WEMA_271430;CGGCTCA,Blank;CATGGTGT,MARS-WEMA_271620;CTGT,MARS-WEMA_271343;CAGTTGA,MARS-WEMA_271438;GGTACAC,MARS-WEMA_271533;TGGCTATT,MARS-WEMA_271628;TAAC,MARS-WEMA_271351;TGTGCAA,MARS-WEMA_271446;AATGTCT,MARS-WEMA_271541;ACCACCGT,MARS-WEMA_271636;CTCGA,MARS-WEMA_271359;CGACAGT,MARS-WEMA_271454;TCATGAC,MARS-WEMA_271549;CTATGTAA,MARS-WEMA_271644;ACCGT,MARS-WEMA_271273;ACGTGTA,MARS-WEMA_271368;TTCGGAC,MARS-WEMA_271463;AACGAGTA,MARS-WEMA_271558;CGTCA,MARS-WEMA_271281;GATGCAT,MARS-WEMA_271376;GCTTAGC,MARS-WEMA_271471;CCGACCAT,MARS-WEMA_271566;TCGCA,MARS-WEMA_271289;CTAATGT,MARS-WEMA_271383;ACTGCCA,MARS-WEMA_271479;TGTCTTAA,MARS-WEMA_271574;CGCAT,MARS-WEMA_271297;GTCGATA,MARS-WEMA_271391;TAGTACT,MARS-WEMA_271487;GTATACTA,MARS-WEMA_271582;GCACT,MARS-WEMA_271305;TATACGT,MARS-WEMA_271399;GACACTC,MARS-WEMA_271495;TGTGCAGT,MARS-WEMA_271589;AGCTA,MARS-WEMA_271313;GCGTAAT,MARS-WEMA_271407;CGAGTAC,MARS-WEMA_271503;ATGCTGGT,MARS-WEMA_271597;CAGCT,MARS-WEMA_271320;AGCGTTA,MARS-WEMA_271415;ATATGTC,MARS-WEMA_271511;GCAAGTAA,MARS-WEMA_271605;TCAGC,MARS-WEMA_271328;ATCCGGA,MARS-WEMA_271423;TGGACCT,MARS-WEMA_271519;CAGGAATA,MARS-WEMA_271613;CATGC,MARS-WEMA_271336;TCAGTAT,MARS-WEMA_271431;CATATGC,MARS-WEMA_271526;GTCTGGAT,MARS-WEMA_271621;GCTAC,MARS-WEMA_271344;CAATGTT,MARS-WEMA_271439;TTCGCCA,MARS-WEMA_271534;CACCACGT,MARS-WEMA_271629;CTGAC,MARS-WEMA_271352;GTTACGA,MARS-WEMA_271447;AGTTACT,MARS-WEMA_271542;TCATTGTA,MARS-WEMA_271637;GACTC,MARS-WEMA_271360;TGCATAT,MARS-WEMA_271455;GTGCCAC,MARS-WEMA_271550;GGTTCATT,MARS-WEMA_271645;ACGTC,MARS-WEMA_271274;CAGCGTA,MARS-WEMA_271369;ACCGGTC,MARS-WEMA_271464;AAGATCGA,MARS-WEMA_271559;CGATC,MARS-WEMA_271282;AGTTCGA,MARS-WEMA_271377;CGGTAGC,MARS-WEMA_271472;CGAAGAAT,MARS-WEMA_271567;ATGCGT,MARS-WEMA_271290;GCTAATT,MARS-WEMA_271384;GCAGTTC,MARS-WEMA_271480;TCTGATTA,MARS-WEMA_271575;TCCAGT,MARS-WEMA_271298;ACGCTGA,MARS-WEMA_271392;TATAGTC,MARS-WEMA_271488;ATCTCTGA,MARS-WEMA_271583;GCTTGA,MARS-WEMA_271306;TAAGCTT,MARS-WEMA_271400;ACTCCGC,MARS-WEMA_271496;AAGCAGAT,MARS-WEMA_271590;TCCGTA,MARS-WEMA_271314;CTTAGAT,MARS-WEMA_271408;GTATTAC,MARS-WEMA_271504;TGCGGATT,MARS-WEMA_271598;TCGGAT,MARS-WEMA_271321;TGATACA,MARS-WEMA_271416;TGAGCGC,MARS-WEMA_271512;CTCCTCGA,MARS-WEMA_271606;GTCTTA,MARS-WEMA_271329;ACCGAGT,MARS-WEMA_271424;GAGTCGC,MARS-WEMA_271520;GGTACTAT,MARS-WEMA_271614;CGGAGT,MARS-WEMA_271337;GTACTTA,MARS-WEMA_271432;ATTGATC,MARS-WEMA_271527;ACAGGATA,MARS-WEMA_271622;CGTCTA,MARS-WEMA_271345;ATGTCAA,MARS-WEMA_271440;TCCACGC,MARS-WEMA_271535;GATCTGGT,MARS-WEMA_271630;CACGTT,MARS-WEMA_271353;CACAGGT,MARS-WEMA_271448;GTTATTC,MARS-WEMA_271543;CTGAAGAA,MARS-WEMA_271638;GTTAGC,MARS-WEMA_271361;GGTGGCA,MARS-WEMA_271456;ATGCACC,MARS-WEMA_271551;TCCGCCAA,MARS-WEMA_271646;AGCATT,MARS-WEMA_271275;CTGAATT,MARS-WEMA_271370;TATGTAC,MARS-WEMA_271465;ATATTCGT,MARS-WEMA_271560;CTCCGA,MARS-WEMA_271283;TCGTTAA,MARS-WEMA_271378;AGACAAGT,MARS-WEMA_271473;CGGTGATT,MARS-WEMA_271568;TTGGCA,MARS-WEMA_271291;TGATCAT,MARS-WEMA_271385;GGCCGAGT,MARS-WEMA_271481;TATGCTGA,MARS-WEMA_271576;CCACGT,MARS-WEMA_271299;CGTCGGA,MARS-WEMA_271393;AACAAGGT,MARS-WEMA_271489;GAACAGTT,MARS-WEMA_271584;GATGTC,MARS-WEMA_271307;GACTATT,MARS-WEMA_271401;TAACGAGA,MARS-WEMA_271497;ACGATTAA,MARS-WEMA_271591;TGTTAC,MARS-WEMA_271315;TAGGTCA,MARS-WEMA_271409;ATACAGGA,MARS-WEMA_271505;GGTTACGT,MARS-WEMA_271599;CAGTTA,MARS-WEMA_271322;GCAACGT,MARS-WEMA_271417;CACAGAGT,MARS-WEMA_271513;TTACGGTA,MARS-WEMA_271607;GCCTAT,MARS-WEMA_271330;ACTTGAT,MARS-WEMA_271425;CGGCAGGT,MARS-WEMA_271521;CACGCCAT,MARS-WEMA_271615;AGTGGC,MARS-WEMA_271338;TCTGATA,MARS-WEMA_271433;GCGCGTGA,MARS-WEMA_271528;TCGAGATA,MARS-WEMA_271623;TGACCT,MARS-WEMA_271346;ATAGTCA,MARS-WEMA_271441;ACAATGGA,MARS-WEMA_271536;AGAACTGA,MARS-WEMA_271631;TTGCAC,MARS-WEMA_271354;TAGCCAT,MARS-WEMA_271449;ACAAGAGT,MARS-WEMA_271544;GTTCTAAT,MARS-WEMA_271639;CTAGCT,MARS-WEMA_271362;AGGAGTC,MARS-WEMA_271457;GAACATGA,MARS-WEMA_271552;CCTTAGAA,MARS-WEMA_271647;TAGTGC,MARS-WEMA_271276;GTAGAGC,MARS-WEMA_271371;CAAGAAGT,MARS-WEMA_271466;GACTGTGT,MARS-WEMA_271561;GTTCCA,MARS-WEMA_271284;GACCTAT,MARS-WEMA_271379;GTCATGGT,MARS-WEMA_271474;CGCGCCTA,MARS-WEMA_271569;TGAATC,MARS-WEMA_271292;CATTAGT,MARS-WEMA_271386;AACAGTGA,MARS-WEMA_271482;TTGCATAT,MARS-WEMA_271577;CGCCAT,MARS-WEMA_271300;ATTAGCA,MARS-WEMA_271394;GTGCAAGA,MARS-WEMA_271490;GCTATAGA,MARS-WEMA_271585;ATCGTC,MARS-WEMA_271308;GAATCTA,MARS-WEMA_271402;CAATAGGA,MARS-WEMA_271498;ACAGCCTT,MARS-WEMA_271592;GTCACT,MARS-WEMA_271316;TGTCATT,MARS-WEMA_271410;TGCAGTGT,MARS-WEMA_271506;CTGTGGTA,MARS-WEMA_271600;CATCGC,MARS-WEMA_271323;GCCAGAT,MARS-WEMA_271418;AGGCTAGA,MARS-WEMA_271514;TGCTTAAT,MARS-WEMA_271608;AGGTCT,MARS-WEMA_271331;CCAGGTA,MARS-WEMA_271426;CTAGTGGT,MARS-WEMA_271522;AATGACGA,MARS-WEMA_271616;CCTGCA,MARS-WEMA_271339;TGGCAAC,MARS-WEMA_271434;GCTAGTGT,MARS-WEMA_271529;AGAACGAT,MARS-WEMA_271624;GTACTC,MARS-WEMA_271347;ATGATCT,MARS-WEMA_271442;GCTGCGGA,MARS-WEMA_271537;GTGCGATT,MARS-WEMA_271632;ACCTGC,MARS-WEMA_271355;CATGTTA,MARS-WEMA_271450;TCGCAAGT,MARS-WEMA_271545;CTAATTGA,MARS-WEMA_271640;CTTGAC,MARS-WEMA_271363;TGTAAGC,MARS-WEMA_271458;CGATGTGT,MARS-WEMA_271553;TAGCAGTA,MARS-WEMA_271648;ACCGCT,MARS-WEMA_271277;ACGGCAT,MARS-WEMA_271372;AACGTAGA,MARS-WEMA_271467;TCCGATAT,MARS-WEMA_271562;GCTCAC,MARS-WEMA_271285;TTCTTGA,MARS-WEMA_271380;CTCACGGA,MARS-WEMA_271475;GCCTCCGA,MARS-WEMA_271570;CTATGC,MARS-WEMA_271293;GGACCTT,MARS-WEMA_271387;TAGCGTGT,MARS-WEMA_271483;AGTCGTGT,MARS-WEMA_271578;CAGCCT,MARS-WEMA_271301;GTGTACA,MARS-WEMA_271395;ACGTAAGA,MARS-WEMA_271491;CATGTATT,MARS-WEMA_271586;GCCATC,MARS-WEMA_271309;TAGCGGC,MARS-WEMA_271403;CGTATGGT,MARS-WEMA_271499;TGAAGCAA,MARS-WEMA_271593;CGCTCA,MARS-WEMA_271317;CGCTTAA,MARS-WEMA_271411;GTACGTGT,MARS-WEMA_271507;GCATTGGT,MARS-WEMA_271601;ACGCTC,MARS-WEMA_271324;GATAGCT,MARS-WEMA_271419;TTCGAAGA,MARS-WEMA_271515;AAGCGATA,MARS-WEMA_271609;CTGATC,MARS-WEMA_271332;AGAGCCT,MARS-WEMA_271427;AATACGGA,MARS-WEMA_271523;GTCAATAT,MARS-WEMA_271617;CCAGTC,MARS-WEMA_271340;TACGAGC,MARS-WEMA_271435;TGACTGGT,MARS-WEMA_271530;CGGCCGTA,MARS-WEMA_271625;TACGCC,MARS-WEMA_271348;TTGACTA,MARS-WEMA_271443;GCGGATGT,MARS-WEMA_271538;TTAGTCGA,MARS-WEMA_271633;CCGTAC,MARS-WEMA_271356;CGCCGAT,MARS-WEMA_271451;CATTGAGA,MARS-WEMA_271546;GACTCAAT,MARS-WEMA_271641;TCGACC,MARS-WEMA_271364;AATTGGC,MARS-WEMA_271459;GTAACAGA,MARS-WEMA_271554;ACTAGGAA,MARS-WEMA_271649;GCATCC,MARS-WEMA_271278;ATACTGC,MARS-WEMA_271373;AGCTTGGT,MARS-WEMA_271468;CGCAACTT,MARS-WEMA_271563;CGTACC,MARS-WEMA_271286;GCGGCTA,MARS-WEMA_271381;ACAGATGA,MARS-WEMA_271476;TCGGTTGA,MARS-WEMA_271571;ATTCAGT,MARS-WEMA_271294;CGTTATA,MARS-WEMA_271388;CAGTTGGT,MARS-WEMA_271484;AATTCTGT,MARS-WEMA_271579;TATCTGA,MARS-WEMA_271302;TTAGACT,MARS-WEMA_271396;TGCAAGAA,MARS-WEMA_271492;CTAGAGTA,MARS-WEMA_271587;TTCAAGT,MARS-WEMA_271310;AGGTTAC,MARS-WEMA_271404;ACTCGAGA,MARS-WEMA_271500;GCGCGCAT,MARS-WEMA_271594;GAGCAGT,MARS-WEMA_271318;GGCAACT,MARS-WEMA_271412;GGAGCTGT,MARS-WEMA_271508;CGATTAGA,MARS-WEMA_271602;TCTAGGA,MARS-WEMA_271325;TCACCGA,MARS-WEMA_271420;CTGAGTGT,MARS-WEMA_271516;ATTCAGTT,MARS-WEMA_271610;ACACGGT,MARS-WEMA_271333;AAGGTTC,MARS-WEMA_271428;GATCAGAA,MARS-WEMA_271524;TTGACAAT,MARS-WEMA_271618;GACGTGA,MARS-WEMA_271341;CTAGCAT,MARS-WEMA_271436;TGCATAGA,MARS-WEMA_271531;TACGTTAA,MARS-WEMA_271626;TCATAGT,MARS-WEMA_271349;AGCTGCA,MARS-WEMA_271444;GAACGAAT,MARS-WEMA_271539;AGATACGA,MARS-WEMA_271634;TTACGAT,MARS-WEMA_271357;AGTACTT,MARS-WEMA_271452;TTGGCGGA,MARS-WEMA_271547;GCTGGATT,MARS-WEMA_271642;GGCTAGA,MARS-WEMA_271365;TAATTGC,MARS-WEMA_271460;CGCCGCAT,MARS-WEMA_271555;GACACCTT,MARS-WEMA_271650;AATCGTT,MARS-WEMA_271279;GCTGGAC,MARS-WEMA_271374;ACGTGTGT,MARS-WEMA_271469;CCGCCTAA,MARS-WEMA_271564;CTATGGA,MARS-WEMA_271287;GTCATCA,Blank;CAAGTGAA,MARS-WEMA_271477;TTCTTGGA,MARS-WEMA_271572;TACGGTA,MARS-WEMA_271295;CAGTGAC,MARS-WEMA_271389;GTTAACGA,MARS-WEMA_271485;CAACGCTT,MARS-WEMA_271580;ACTATGT,MARS-WEMA_271303;GCACACT,MARS-WEMA_271397;TCGTGGAT,MARS-WEMA_271493;AGCAGATA,Blank;CGTGAAT,MARS-WEMA_271311;AAGTCTT,MARS-WEMA_271405;AGCGATAA,MARS-WEMA_271501;TCTTAGGT,MARS-WEMA_271595;TTGCAGA,MARS-WEMA_271319;TGTATCA,MARS-WEMA_271413;CCACCAGT,MARS-WEMA_271509;GTGGCTAT,MARS-WEMA_271603;AACTTGT,MARS-WEMA_271326;CTGGAAC,MARS-WEMA_271421;GGCGTGTA,MARS-WEMA_271517;AGACTGAA,MARS-WEMA_271611;TGACGTA,MARS-WEMA_271334;ATTCGAC,MARS-WEMA_271429;AAGACAGT,MARS-WEMA_271525;CATAATGA,MARS-WEMA_271619;GCTATAA,MARS-WEMA_271342;CAAGATC,MARS-WEMA_271437;TTGTGCGA,MARS-WEMA_271532;GTGTCAGT,MARS-WEMA_271627;ATCGTAT,MARS-WEMA_271350;TCGCGCA,MARS-WEMA_271445;GAAGACAT,MARS-WEMA_271540;AGTGGCTT,MARS-WEMA_271635;TACTGAT,MARS-WEMA_271358;AGTGTGC,MARS-WEMA_271453;TGTCAAGA,MARS-WEMA_271548;CCACTGCA,MARS-WEMA_271643;CTTGAGA,MARS-WEMA_271366;GAATTCT,MARS-WEMA_271461;GCGAGGTT,MARS-WEMA_271556;TACAGGAT,MARS-WEMA_271651;)
description
Zea mays
http://purl.obolibrary.org/obo/NCBITaxon_4577
organism
pooled
http://www.ebi.ac.uk/efo/EFO_0000663
strain
Generic sample from Zea mays
title