SAMN02212295
External Id
COLLAGE OF VETERINARY SCIENCE AND A.H.,AAU
INSDC center name
2013-06-24T00:00:00Z
INSDC first public
2021-02-28T02:07:09.793Z
INSDC last update
SRS452374
INSDC secondary accession
live
INSDC status
Generic
NCBI submission model
Generic.1.0
NCBI submission package
SRS452374
SRA accession
5 years
http://purl.obolibrary.org/obo/UO_0000036
age
Histology
http://www.ebi.ac.uk/efo/EFO_1001512
authority
Ruminal trematodes
biome
Rumen
http://purl.obolibrary.org/obo/UBERON_0007365
body site
2012-12-14
collection date
Rumen flukes are socio-economically important parasitic flatworms (Platyhelminthes: Trematoda: Digenea) that attack livestock adversely thereby affecting their productivity. Despite its socioeconomic impact, almost nothing is known about the molecular biology of this parasite, its interplay with its hosts, and the molecular pathogenesis of Paramphistomosis. Recent advances in genomics and bioinformatics provide unique opportunities to gain improved insights into the biology of parasites as well as their relationships with their hosts at the molecular level. The present study reports the first transcriptome representing the adult stage of Paramphistomum cervi, defined using a massively parallel sequencing-coupled bioinformatics approach. Relative levels of transcription were determined for individual molecules, which were also characterized (at the inferred amino acid level) based on homology, gene ontology and pathway mapping. These findings are expected to provide new insights into the pathophysiology of P. cervi and for the development of improved interventions for disease control and will facilitate a more fundamental understanding of Paramphistomes biology, evolution and the host-parasite interplay.
description
Adult
http://www.ebi.ac.uk/efo/EFO_0001272
dev stage
Paramphistomosis
disease
India: Gujarat
geo loc name
Rumen
http://purl.obolibrary.org/obo/UBERON_0007365
isolate
Slaughter House
isolation source
Goat
label
Paramphistomum cervi
http://purl.obolibrary.org/obo/NCBITaxon_762801
organism
Whole organism
http://purl.obolibrary.org/obo/UBERON_0000468
sample type
Capra hircus
http://purl.obolibrary.org/obo/NCBITaxon_9925
specific host
General Sample for Paramphistomum cervi
title