SAMN02116943
External Id
Cornell University
INSDC center name
2013-05-03T12:23:51.030Z
INSDC first public
2013-05-05T22:49:15.237Z
INSDC last update
SRS418514
INSDC secondary accession
live
INSDC status
Generic
NCBI submission model
Generic.1.0
NCBI submission package
SRS418514
SRA accession
This sample is a Genotyping-by-sequencing library with pooled individuals as described in http://www.maizegenetics.net/Table/Genotyping-By-Sequencing/. The restriction enzyme used for this library is ApeKI. Mapping between GBS barcodes and samples: (CTCC,SW109.08;TGCA,Kanlow.05;ACTA,SW64.01;CAGA,SW790.03;AACT,SW797.03;GCGT,SW129.09;TGCGA,SW33.05;CGAT,Cave-in-Rock.03;CGCTT,ECS-6.03;TCACC,Cave-in-Rock.01;CTAGC,SW31.02;ACAAA,SW58.08;TTCTC,SW799.09;AGCCC,WS4U.06;GTATT,SW43.09;CTGTA,Sunburst.07;ACCGT,SW58.09;GTAA,SW109.07;GGTTGT,SW64.07;CCAGCT,SW786.02;TTCAGA,SW802.06;TAGGAA,SW46.03;GCTCTA,SW102.10;CCACAA,SW63.08;GCTTA,SWG32.04;CTTCCA,Cave-in-Rock.08;GAGATA,SW806.01;ATGCCT,Blackwell.01;TATTTTT,SW115.03;CTTGCTT,SW793.06;ATGAAAC,SW40.01;AAAAGTT,SWG32.08;GAATTCA,WS98-SB.05;GAACTTC,SW115.05;GGACCTA,WS98-SB.09;GTCGATT,SW789.02;AACGCCT,Dacotah.02;AATATGC,ECS-11.01;ACGACTAC,Carthage.01;GGTGT,SW123.01;TAGCATGC,SW31.08;AGTGGA,Blank;TAGGCCAT,SW112.01;TGCAAGGA,SW788.05;TGGTACGT,SW790.01;TCTCAGTC,SW38.04;CCGGATAT,SW802.03;CGCCTTAT,SW793.07;AGGC,SW129.04;GATC,SW112.10;TCAC,SW123.10;AGGAT,Shelter.05;ATTGA,SW115.05;CATCT,SW38.08;CCTAC,SW110.01;GAGGA,KY1625.05;GGAAC,SW65.10;GTCAA,WS98-SB.06;TAATA,Timber.01;TACAT,SW128.01;TCGTT,SW128.08;ACCTAA,ECS-2.01;ATATGT,Dacotah.06;ATCGTA,SW110.08;CATCGT,SW51.01;CGCGGT,KY1625.10;CTATTA,Pathfinder.05;GCCAGT,Pathfinder.10;GGAAGA,High_Tide.10;GTACTT,Shelter.10;GTTGAA,SW782.09;TAACGA,High_Tide.09;TGGCTA,Pathfinder.04;ACGTGTT,SW112.03;ATTAATT,SW50.02;ATTGGAT,SWG39.05;CATAAGT,SW127.01;CGCTGAT,SW123.07;CGGTAGA,SW102.08;CTACGGA,Kanlow.08;GCGGAAT,SW109.03;TAGCGGA,SW795.04;TCGAAGA,Pathfinder.08;TCTGTGA,WS98-SB.05;TGCTGGA,SW782.03;AACCGAGA,Dacotah.08;ACAGGGAA,SW50.05;ACGTGGTA,SW102.03;CCATGGGT,SW806.08;CGCGGAGA,SW799.03;CGTGTGGT,SW786.10;GCTGTGGA,Carthage.04;GGATTGGT,SW808.04;GTGAGGGT,SW803.08;TATCGGGA,SW51.09;TTCCTGGA,SW124.10;)
description
Panicum virgatum
http://purl.obolibrary.org/obo/NCBITaxon_38727
organism
pooled
http://www.ebi.ac.uk/efo/EFO_0000663
strain
Generic sample from Panicum virgatum
title