SAMN02086262
External Id
Cornell University
INSDC center name
2013-04-30T11:29:12.597Z
INSDC first public
2013-04-30T21:05:13.650Z
INSDC last update
SRS417481
INSDC secondary accession
live
INSDC status
Generic
NCBI submission model
Generic.1.0
NCBI submission package
SRS417481
SRA accession
This sample is a Genotyping-by-sequencing library with pooled individuals as described in http://www.maizegenetics.net/Table/Genotyping-By-Sequencing/. The restriction enzyme used for this library is ApeKI. Mapping between GBS barcodes and samples: (CTCC,DE2;TGCA,R168;ACTA,NC290A;CAGA,CML14;AACT,NC338;GCGT,CO106;TGCGA,W22;CGAT,M14;CGCTT,CML220;TCACC,B84;CTAGC,Va99;ACAAA,A654;TTCTC,BLANK;AGCCC,A239;GTATT,B104;CTGTA,NC230;ACCGT,A272;GTAA,CML258;GGTTGT,B97;CCAGCT,SC213R;TTCAGA,K55;TAGGAA,B76;GCTCTA,IDS28;CCACAA,Va22;GCTTA,NC250;CTTCCA,A680;GAGATA,NC356;ATGCCT,CI28A;TATTTTT,Va59;CTTGCTT,A554;ATGAAAC,NC298;AAAAGTT,H91;GAATTCA,CML52;GAACTTC,Pa875;GGACCTA,W153R;GTCGATT,C103;AACGCCT,B109;AATATGC,NC328;ACGACTAC,A619;GGTGT,NC262;TAGCATGC,B103;AGTGGA,F6;TAGGCCAT,Oh603;TGCAAGGA,Oh40B;TGGTACGT,CML333;TCTCAGTC,CML332;CCGGATAT,A659;CGCCTTAT,H95;AGGC,B73Htrhm;GATC,CH70130;TCAC,CML287;AGGAT,W117Ht;ATTGA,A682;CATCT,Tzi25;CCTAC,Oh43E;GAGGA,CI7;GGAAC,NC318;GTCAA,CM105;TAATA,F7;TACAT,CML91;TCGTT,R109B;ACCTAA,CML228;ATATGT,CML92;ATCGTA,A632;CATCGT,Sg18;CGCGGT,CML277;CTATTA,Va35;GCCAGT,NC300;GGAAGA,Ki11;GTACTT,B77;GTTGAA,EP1;TAACGA,CML311;TGGCTA,CM174;ACGTGTT,WD;ATTAATT,Ki14;ATTGGAT,CML45;CATAAGT,NC368;CGCTGAT,NC320;CGGTAGA,CO125;CTACGGA,CI66;GCGGAAT,B10;TAGCGGA,I29;TCGAAGA,W182B;TCTGTGA,tripsacum;TGCTGGA,CML281;AACCGAGA,DE3;ACAGGGAA,L317;ACGTGGTA,CI3A;CCATGGGT,Os420;CGCGGAGA,CML323;CGTGTGGT,NC364;GCTGTGGA,3316;GGATTGGT,CML238;GTGAGGGT,I137TN;TATCGGGA,CML157Q;TTCCTGGA,BLANK;CTCC,DE2;TGCA,R168;ACTA,NC290A;CAGA,CML14;AACT,NC338;GCGT,CO106;TGCGA,W22;CGAT,M14;CGCTT,CML220;TCACC,B84;CTAGC,Va99;ACAAA,A654;TTCTC,BLANK;AGCCC,A239;GTATT,B104;CTGTA,NC230;ACCGT,A272;GTAA,CML258;GGTTGT,B97;CCAGCT,SC213R;TTCAGA,K55;TAGGAA,B76;GCTCTA,IDS28;CCACAA,Va22;GCTTA,NC250;CTTCCA,A680;GAGATA,NC356;ATGCCT,CI28A;TATTTTT,Va59;CTTGCTT,A554;ATGAAAC,NC298;AAAAGTT,H91;GAATTCA,CML52;GAACTTC,Pa875;GGACCTA,W153R;GTCGATT,C103;AACGCCT,B109;AATATGC,NC328;ACGACTAC,A619;GGTGT,NC262;TAGCATGC,B103;AGTGGA,F6;TAGGCCAT,Oh603;TGCAAGGA,Oh40B;TGGTACGT,CML333;TCTCAGTC,CML332;CCGGATAT,A659;CGCCTTAT,H95;AGGC,B73Htrhm;GATC,CH70130;TCAC,CML287;AGGAT,W117Ht;ATTGA,A682;CATCT,Tzi25;CCTAC,Oh43E;GAGGA,CI7;GGAAC,NC318;GTCAA,CM105;TAATA,F7;TACAT,CML91;TCGTT,R109B;ACCTAA,CML228;ATATGT,CML92;ATCGTA,A632;CATCGT,Sg18;CGCGGT,CML277;CTATTA,Va35;GCCAGT,NC300;GGAAGA,Ki11;GTACTT,B77;GTTGAA,EP1;TAACGA,CML311;TGGCTA,CM174;ACGTGTT,WD;ATTAATT,Ki14;ATTGGAT,CML45;CATAAGT,NC368;CGCTGAT,NC320;CGGTAGA,CO125;CTACGGA,CI66;GCGGAAT,B10;TAGCGGA,I29;TCGAAGA,W182B;TCTGTGA,tripsacum;TGCTGGA,CML281;AACCGAGA,DE3;ACAGGGAA,L317;ACGTGGTA,CI3A;CCATGGGT,Os420;CGCGGAGA,CML323;CGTGTGGT,NC364;GCTGTGGA,3316;GGATTGGT,CML238;GTGAGGGT,I137TN;TATCGGGA,CML157Q;TTCCTGGA,BLANK;CTCC,DE2;TGCA,R168;ACTA,NC290A;CAGA,CML14;AACT,NC338;GCGT,CO106;TGCGA,W22;CGAT,M14;CGCTT,CML220;TCACC,B84;CTAGC,Va99;ACAAA,A654;TTCTC,BLANK;AGCCC,A239;GTATT,B104;CTGTA,NC230;ACCGT,A272;GTAA,CML258;GGTTGT,B97;CCAGCT,SC213R;TTCAGA,K55;TAGGAA,B76;GCTCTA,IDS28;CCACAA,Va22;GCTTA,NC250;CTTCCA,A680;GAGATA,NC356;ATGCCT,CI28A;TATTTTT,Va59;CTTGCTT,A554;ATGAAAC,NC298;AAAAGTT,H91;GAATTCA,CML52;GAACTTC,Pa875;GGACCTA,W153R;GTCGATT,C103;AACGCCT,B109;AATATGC,NC328;ACGACTAC,A619;GGTGT,NC262;TAGCATGC,B103;AGTGGA,F6;TAGGCCAT,Oh603;TGCAAGGA,Oh40B;TGGTACGT,CML333;TCTCAGTC,CML332;CCGGATAT,A659;CGCCTTAT,H95;AGGC,B73Htrhm;GATC,CH70130;TCAC,CML287;AGGAT,W117Ht;ATTGA,A682;CATCT,Tzi25;CCTAC,Oh43E;GAGGA,CI7;GGAAC,NC318;GTCAA,CM105;TAATA,F7;TACAT,CML91;TCGTT,R109B;ACCTAA,CML228;ATATGT,CML92;ATCGTA,A632;CATCGT,Sg18;CGCGGT,CML277;CTATTA,Va35;GCCAGT,NC300;GGAAGA,Ki11;GTACTT,B77;GTTGAA,EP1;TAACGA,CML311;TGGCTA,CM174;ACGTGTT,WD;ATTAATT,Ki14;ATTGGAT,CML45;CATAAGT,NC368;CGCTGAT,NC320;CGGTAGA,CO125;CTACGGA,CI66;GCGGAAT,B10;TAGCGGA,I29;TCGAAGA,W182B;TCTGTGA,tripsacum;TGCTGGA,CML281;AACCGAGA,DE3;ACAGGGAA,L317;ACGTGGTA,CI3A;CCATGGGT,Os420;CGCGGAGA,CML323;CGTGTGGT,NC364;GCTGTGGA,3316;GGATTGGT,CML238;GTGAGGGT,I137TN;TATCGGGA,CML157Q;TTCCTGGA,BLANK;)
description
Zea mays
http://purl.obolibrary.org/obo/NCBITaxon_4577
organism
pooled
http://www.ebi.ac.uk/efo/EFO_0000663
strain
Generic sample from Zea mays
title