SAMN01992995
External Id
University of Maryland School of Medicine, Institute for Genome Sciences
INSDC center name
2013-03-28T00:00:00Z
INSDC first public
2019-06-20T16:19:36.192Z
INSDC last update
live
INSDC status
MIGS.ba
NCBI submission model
MIGS.ba.5.0
NCBI submission package
1005477
NCBI taxon id
Velvet 1.1.07
assembly
stool
http://www.ebi.ac.uk/efo/EFO_0007874
body product
1991
collection date
Keywords: GSC:MIxS;MIGS:5.0
description
terrestrial biome [ENVO:00000446]
environment (biome)
livestock-associated habitat [ENVO:02000005]
environment (feature)
feces [ENVO:00002003]
environment (material)
138.44
finishing strategy (depth of coverage)
USA:Nebraska
geo loc name
9913
host taxid
bacteria_archaea
investigation type
Escherichia coli FRIK1999
http://purl.obolibrary.org/obo/NCBITaxon_1005477
organism
lineage II
phenotype
Genomic anatomy of E.coli O157:H7 outbreaks: Insights into pathogenome evolution and population dynamics during the time-course of infection.
project name
Illumina
sequencing method
O157:H7
serotype
cow
specific host
FRIK1999
strain
MIGS Cultured Bacterial/Archaeal sample from Escherichia coli FRIK1999 sample MS100013751
title