SAMD00089547
External Id
Tohoku University, Graduate School of Life Sciences
INSDC center name
2018-01-11T00:00:00Z
INSDC first public
2018-01-11T08:46:06Z
INSDC last update
DRS057406
INSDC secondary accession
live
INSDC status
Generic
NCBI submission model
Generic.1.0
NCBI submission package
DRS057406
SRA accession
Shinfushinarijibai
cultivar
Cucumber seeds were germinated as described for sample A1. After the initial 18 h germination phase, seedlings were exposed to H2O-saturated conditions and grown for a further 4 h while under rotation using a 3D clinostat. Under these conditions, roots bent randomly. Cucumber seedlings with roots that bent away from the water-absorbent plastic side were selectively harvested. Seedlings were then placed in RNAlater and stored at 4 degree Celsius overnight. A small section of root tip (0.5 mm) was removed, and a 1.5 mm section of the remaining root was divided longitudinally into the water-absorbent plastic (wet) side (this sample) and the opposite (dry) side (sample A10).
description
seedling
http://purl.obolibrary.org/obo/PO_0007131
dev stage
Cucumis sativus var. sativus
http://purl.obolibrary.org/obo/NCBITaxon_869827
organism
A11
http://www.ebi.ac.uk/efo/EFO_0001327
sample name
root
tissue type
Water-absorbent plastic side (wet side) of longitudinally halved roots that bent away from the water-absorbent plastic side after germinated cucumber seedlings were exposed to H2O saturation under clinostat conditions for 4 h
title
sativus
http://purl.obolibrary.org/obo/NCBITaxon_82528
variety