SAMN06450706
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:14:25.010Z
INSDC last update
SRS2033421
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2033421
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
98.32%
completeness_estimated
0.30%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX327522 metagenome.
description
true
environmental sample
114.14
genome coverage
Canada: Medicine Hat Glauconitic field
geo loc name
UBA6213
isolate
waste water
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
hydrocarbon metagenome
metagenome source
true
metagenomic
Rhodobacteraceae bacterium UBA6213
http://purl.obolibrary.org/obo/NCBITaxon_1952811
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX327522 metagenome
subsrc_note
Uncultivated Rhodobacteraceae bacterium UBA6213 genome recovered from SRX327522
title
This BioSample is a metagenomic assembly obtained from the hydrocarbon metagenome reads: SRR943321,SRR943320,SRR943319,SRR943317,SRR942928,SRR943316,SRR943318.
value