SAMN06455036
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2036463
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2036463
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
89.90%
completeness_estimated
4.15%
contamination_estimated
true
environmental sample
87.62
genome coverage
UBA3264
isolate
rat gut
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
rat gut metagenome
metagenome source
true
metagenomic
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX803751 metagenome
subsrc_note
Uncultivated Porphyromonadaceae bacterium UBA3264 genome recovered from SRX803751
title
This BioSample is a metagenomic assembly obtained from the rat gut metagenome reads: SRR1702553.
value