SAMN06455794
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T12:58:21.796Z
INSDC last update
SRS2032658
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2032658
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
92.89%
completeness_estimated
4.54%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX247688 metagenome.
description
true
environmental sample
88.33
genome coverage
Denmark: Ejby Moelle, Odense
geo loc name
UBA1939
isolate
wastewater
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
wastewater metagenome
metagenome source
true
metagenomic
Novosphingobium sp. UBA1939
http://purl.obolibrary.org/obo/NCBITaxon_1946982
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX247688 metagenome
subsrc_note
Uncultivated Novosphingobium sp. UBA1939 genome recovered from SRX247688
title
This BioSample is a metagenomic assembly obtained from the wastewater metagenome reads: SRR770574,SRR770019.
value