SAMN06457332
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:03:42.909Z
INSDC last update
SRS2032027
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2032027
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
81.40%
completeness_estimated
1.61%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX1044543 metagenome.
description
true
environmental sample
173.66
genome coverage
Atlantic Ocean:Mid Cayman Rise
geo loc name
UBA2527
isolate
ocean water at depth 4950m
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
hydrothermal vent metagenome
metagenome source
true
metagenomic
Thalassolituus sp. UBA2527
http://purl.obolibrary.org/obo/NCBITaxon_1947661
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX1044543 metagenome
subsrc_note
Uncultivated Thalassolituus sp. UBA2527 genome recovered from SRX1044543
title
This BioSample is a metagenomic assembly obtained from the hydrothermal vent metagenome reads: SRR2046221.
value