SAMN06453904
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:19:54.109Z
INSDC last update
SRS2034331
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2034331
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
74.73%
completeness_estimated
0.95%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX559946 metagenome.
description
true
environmental sample
44.18
genome coverage
USA: Coal Oil Point, Santa Barbara, California
geo loc name
UBA3080
isolate
Oil polluted marine water
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
marine metagenome
metagenome source
true
metagenomic
Rhodobacterales bacterium UBA3080
http://purl.obolibrary.org/obo/NCBITaxon_1951231
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX559946 metagenome
subsrc_note
Uncultivated Rhodobacterales bacterium UBA3080 genome recovered from SRX559946
title
This BioSample is a metagenomic assembly obtained from the marine metagenome reads: SRR1313318.
value