SAMN06453652
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:19:47.401Z
INSDC last update
SRS2036522
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2036522
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
98.66%
completeness_estimated
0.67%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX803753 metagenome.
description
true
environmental sample
100.74
genome coverage
UBA3315
isolate
rat gut
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
rat gut metagenome
metagenome source
true
metagenomic
Ruminococcaceae bacterium UBA3315
http://purl.obolibrary.org/obo/NCBITaxon_1952314
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX803753 metagenome
subsrc_note
Uncultivated Ruminococcaceae bacterium UBA3315 genome recovered from SRX803753
title
This BioSample is a metagenomic assembly obtained from the rat gut metagenome reads: SRR1702555.
value