SAMN06457827
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2034174
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2034174
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
98.66%
completeness_estimated
0.14%
http://purl.obolibrary.org/obo/CHEBI_2948
contamination_estimated
true
environmental sample
46.2
genome coverage
Canada:Fort McMurray
geo loc name
UBA4007
isolate
Sand Stone
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
hydrocarbon metagenome
metagenome source
true
metagenomic
Deinococcus geothermalis
http://purl.obolibrary.org/obo/NCBITaxon_68909
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX546000 metagenome
subsrc_note
Uncultivated Deinococcus geothermalis UBA4007 genome recovered from SRX546000
title
This BioSample is a metagenomic assembly obtained from the hydrocarbon metagenome reads: SRR1313239,SRR1313240.
value