SAMN06454385
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2036099
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2036099
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
65.72%
completeness_estimated
0.59%
contamination_estimated
true
environmental sample
4.61
genome coverage
USA: Municipal Pensacola Beach, FL
geo loc name
UBA5343
isolate
beach sand
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
beach sand metagenome
metagenome source
true
metagenomic
Alphaproteobacteria bacterium UBA5343
http://purl.obolibrary.org/obo/NCBITaxon_1948409
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX696244 metagenome
subsrc_note
Uncultivated Alphaproteobacteria bacterium UBA5343 genome recovered from SRX696244
title
This BioSample is a metagenomic assembly obtained from the beach sand metagenome reads: SRR1569871.
value