SAMN06455369
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T12:58:10.560Z
INSDC last update
SRS2031979
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2031979
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
96.11%
completeness_estimated
0.71%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX1017628 metagenome.
description
true
environmental sample
37.26
genome coverage
USA: Looe Key National Marine Sanctuary, Florida
geo loc name
UBA6056
isolate
coral mucus
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
coral metagenome
metagenome source
true
metagenomic
Verrucomicrobia bacterium UBA6056
http://purl.obolibrary.org/obo/NCBITaxon_1948270
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX1017628 metagenome
subsrc_note
Uncultivated Verrucomicrobia bacterium UBA6056 genome recovered from SRX1017628
title
This BioSample is a metagenomic assembly obtained from the coral metagenome reads: SRR2008165.
value