SAMN06454517
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:20:54.205Z
INSDC last update
SRS2032083
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2032083
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
82.77%
completeness_estimated
2.99%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX1050758 metagenome.
description
true
environmental sample
23.91
genome coverage
Baltic Sea
geo loc name
UBA3116
isolate
water
http://purl.obolibrary.org/obo/CHEBI_15377
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
marine metagenome
metagenome source
true
metagenomic
Acidimicrobium sp. UBA3116
http://purl.obolibrary.org/obo/NCBITaxon_1945921
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX1050758 metagenome
subsrc_note
Uncultivated Acidimicrobium sp. UBA3116 genome recovered from SRX1050758
title
This BioSample is a metagenomic assembly obtained from the marine metagenome reads: SRR2053290.
value