SAMN06454873
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:21:03.582Z
INSDC last update
SRS2036023
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2036023
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
68.31%
completeness_estimated
0.00%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX691283 metagenome.
description
true
environmental sample
26.46
genome coverage
China: Chengdu
geo loc name
UBA5361
isolate
mud
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
fermentation metagenome
metagenome source
true
metagenomic
Ruminococcaceae bacterium UBA5361
http://purl.obolibrary.org/obo/NCBITaxon_1952383
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX691283 metagenome
subsrc_note
Uncultivated Ruminococcaceae bacterium UBA5361 genome recovered from SRX691283
title
This BioSample is a metagenomic assembly obtained from the fermentation metagenome reads: SRR1562008.
value