SAMN06452236
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2033901
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2033901
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
99.69%
completeness_estimated
0.12%
http://purl.obolibrary.org/obo/CHEBI_41774
contamination_estimated
true
environmental sample
183.68
genome coverage
China: Tianjin
geo loc name
UBA5705
isolate
soil
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
soil metagenome
http://purl.obolibrary.org/obo/NCBITaxon_410658
metagenome source
true
metagenomic
Bacillus amyloliquefaciens
http://purl.obolibrary.org/obo/NCBITaxon_1390
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX467340 metagenome
subsrc_note
Uncultivated Bacillus amyloliquefaciens UBA5705 genome recovered from SRX467340
title
This BioSample is a metagenomic assembly obtained from the soil metagenome reads: SRR1168414,SRR1168459,SRR1164896.
value