SAMN06456281
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2034169
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2034169
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
87.49%
completeness_estimated
4.96%
contamination_estimated
true
environmental sample
51.61
genome coverage
Canada:Fort McMurray
geo loc name
UBA4002
isolate
Sand Stone
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
hydrocarbon metagenome
metagenome source
true
metagenomic
Rhodocyclaceae bacterium UBA4002
http://purl.obolibrary.org/obo/NCBITaxon_1952841
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX546000 metagenome
subsrc_note
Uncultivated Rhodocyclaceae bacterium UBA4002 genome recovered from SRX546000
title
This BioSample is a metagenomic assembly obtained from the hydrocarbon metagenome reads: SRR1313239,SRR1313240.
value