SAMN06454896
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:21:04.195Z
INSDC last update
SRS2031867
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2031867
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
92.88%
completeness_estimated
2.31%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX034809 metagenome.
description
true
environmental sample
17.09
genome coverage
UBA3055
isolate
Switch grass fiber attached community in cow rumen, 72 hour post incubation
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
bovine gut metagenome
metagenome source
true
metagenomic
Elusimicrobia bacterium UBA3055
http://purl.obolibrary.org/obo/NCBITaxon_1947913
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX034809 metagenome
subsrc_note
Uncultivated Elusimicrobia bacterium UBA3055 genome recovered from SRX034809
title
This BioSample is a metagenomic assembly obtained from the bovine gut metagenome reads: SRR094166,SRR094417,SRR094403,SRR094415,SRR094418,SRR094416,SRR094405.
value