SAMN06454456
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:20:52.617Z
INSDC last update
SRS2032698
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2032698
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
92.31%
completeness_estimated
0.00%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX255561 metagenome.
description
true
environmental sample
28.07
genome coverage
UBA940
isolate
termite gut
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
termite gut metagenome
metagenome source
true
metagenomic
Alistipes sp. UBA940
http://purl.obolibrary.org/obo/NCBITaxon_1946017
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX255561 metagenome
subsrc_note
Uncultivated Alistipes sp. UBA940 genome recovered from SRX255561
title
This BioSample is a metagenomic assembly obtained from the termite gut metagenome reads: SRR797682,SRR797685.
value