SAMN06454213
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2031534
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2031534
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
95.57%
completeness_estimated
7.17%
contamination_estimated
true
environmental sample
19.71
genome coverage
UBA1671
isolate
saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
marine metagenome
metagenome source
true
metagenomic
Myxococcales bacterium UBA1671
http://purl.obolibrary.org/obo/NCBITaxon_1961463
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in ERX556106 metagenome
subsrc_note
Uncultivated Myxococcales bacterium UBA1671 genome recovered from ERX556106
title
This BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR599030.
value