SAMN06233741
External Id
International University of Africa
INSDC center name
2017-01-16T00:00:00Z
INSDC first public
2021-02-24T10:29:08.327Z
INSDC last update
SRS1923676
INSDC secondary accession
live
INSDC status
Pathogen.cl
NCBI submission model
Pathogen.cl.1.0
NCBI submission package
SRS1923676
SRA accession
Mohamed Abdelrahman
collected by
2015-05-05
collection date
It was isolated from urine of male inpatient suffering from chronic UTI in military hospital in Khartoum, Sudan, Antimicrobial susceptibility test was done and reported as MDR. DNA was extracted and the species identified using 16s ribosomal DNA gene, then WGS was done for comparative genomic with susceptible strain and for characterization of antimicrobial resistant genes
description
Sudan: Khartoum
geo loc name
Homo sapiens
http://purl.obolibrary.org/obo/NCBITaxon_9606
host
42
host age
UTI
host disease
male
http://purl.obolibrary.org/obo/PATO_0000384
host sex
urine
http://purl.obolibrary.org/obo/UBERON_0001088
isolation source
15.36 N 32.32 E
lat lon
Pseudomonas aeruginosa
http://purl.obolibrary.org/obo/NCBITaxon_287
organism
Kasamber
strain
Pathogen: clinical or host-associated sample from Pseudomonas aeruginosa
title