SAMN06450514
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:14:19.936Z
INSDC last update
SRS2034119
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2034119
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
75.53%
completeness_estimated
0.52%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX514548 metagenome.
description
true
environmental sample
27.44
genome coverage
UBA5951
isolate
water
http://purl.obolibrary.org/obo/CHEBI_15377
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
marine metagenome
metagenome source
true
metagenomic
Alphaproteobacteria bacterium UBA5951
http://purl.obolibrary.org/obo/NCBITaxon_1948411
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX514548 metagenome
subsrc_note
Uncultivated Alphaproteobacteria bacterium UBA5951 genome recovered from SRX514548
title
This BioSample is a metagenomic assembly obtained from the marine metagenome reads: SRR1230755.
value