SAMN06451483
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2031837
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2031837
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
73.21%
completeness_estimated
0.19%
contamination_estimated
true
environmental sample
56.35
genome coverage
UBA3426
isolate
Columbia River estuary, salinty 5
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
marine metagenome
metagenome source
true
metagenomic
Porticoccaceae bacterium UBA3426
http://purl.obolibrary.org/obo/NCBITaxon_1952756
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in ERX943713 metagenome
subsrc_note
Uncultivated Porticoccaceae bacterium UBA3426 genome recovered from ERX943713
title
This BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR864069.
value