SAMN06454223
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2032276
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2032276
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
89.31%
completeness_estimated
1.06%
http://purl.obolibrary.org/obo/PO_0007123
contamination_estimated
true
environmental sample
94.96
genome coverage
Colombia: Santander de Quilichao
geo loc name
UBA5800
isolate
cassava fermentation tank
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
fermentation metagenome
metagenome source
true
metagenomic
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX1363839 metagenome
subsrc_note
Uncultivated Lactobacillus sp. UBA5800 genome recovered from SRX1363839
title
This BioSample is a metagenomic assembly obtained from the fermentation metagenome reads: SRR2753158.
value