SAMN06450329
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:14:14.807Z
INSDC last update
SRS2030662
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2030662
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
91.78%
completeness_estimated
2.75%
contamination_estimated
Uncultivated genome recovered from an assembly of the ERX552246 metagenome.
description
true
environmental sample
14.59
genome coverage
UBA850
isolate
saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
marine metagenome
metagenome source
true
metagenomic
Spongiibacter tropicus
http://purl.obolibrary.org/obo/NCBITaxon_454602
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in ERX552246 metagenome
subsrc_note
Uncultivated Spongiibacter tropicus UBA850 genome recovered from ERX552246
title
This BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR594308.
value