SAMN06451905
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:15:40.175Z
INSDC last update
SRS2031155
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2031155
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
63.26%
completeness_estimated
1.32%
contamination_estimated
Uncultivated genome recovered from an assembly of the ERX555931 metagenome.
description
true
environmental sample
43.98
genome coverage
UBA2964
isolate
saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
marine metagenome
metagenome source
true
metagenomic
Alphaproteobacteria bacterium UBA2964
http://purl.obolibrary.org/obo/NCBITaxon_1948376
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in ERX555931 metagenome
subsrc_note
Uncultivated Alphaproteobacteria bacterium UBA2964 genome recovered from ERX555931
title
This BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR599097.
value