SAMN06455841
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2034136
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2034136
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
89.27%
completeness_estimated
0.41%
contamination_estimated
true
environmental sample
9.4
genome coverage
Taiwan: Shi-Huang-Ping hot spring
geo loc name
UBA2488
isolate
acidic hot spring
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
hot springs metagenome
metagenome source
true
metagenomic
Aquificaceae bacterium UBA2488
http://purl.obolibrary.org/obo/NCBITaxon_1951446
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX532417 metagenome
subsrc_note
Uncultivated Aquificaceae bacterium UBA2488 genome recovered from SRX532417
title
This BioSample is a metagenomic assembly obtained from the hot springs metagenome reads: SRR1297186,SRR1297203,SRR1297185.
value