SAMN06453797
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:19:51.245Z
INSDC last update
SRS2033702
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2033702
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
66.60%
completeness_estimated
0.53%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX331965 metagenome.
description
true
environmental sample
22.73
genome coverage
USA: Georgia
geo loc name
UBA2236
isolate
Lake Lanier
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
freshwater metagenome
metagenome source
true
metagenomic
Actinobacteria bacterium UBA2236
http://purl.obolibrary.org/obo/NCBITaxon_1948325
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX331965 metagenome
subsrc_note
Uncultivated Actinobacteria bacterium UBA2236 genome recovered from SRX331965
title
This BioSample is a metagenomic assembly obtained from the freshwater metagenome reads: SRR948334.
value