SAMN06452646
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:16:46.192Z
INSDC last update
SRS2033211
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2033211
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
83.26%
completeness_estimated
3.78%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX310152 metagenome.
description
true
environmental sample
9.44
genome coverage
Israel
geo loc name
UBA5871
isolate
soil
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
soil metagenome
http://purl.obolibrary.org/obo/NCBITaxon_410658
metagenome source
true
metagenomic
Flavobacteriales bacterium UBA5871
http://purl.obolibrary.org/obo/NCBITaxon_1951041
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX310152 metagenome
subsrc_note
Uncultivated Flavobacteriales bacterium UBA5871 genome recovered from SRX310152
title
This BioSample is a metagenomic assembly obtained from the soil metagenome reads: SRR908211,SRR908272,SRR908208.
value