SAMN06453155
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:17:00.247Z
INSDC last update
SRS2036284
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2036284
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
81.21%
completeness_estimated
0.64%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX748868 metagenome.
description
true
environmental sample
46.72
genome coverage
Portugal:Cabeco de Vide
geo loc name
UBA911
isolate
Cabeco de Vide travertine
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
aquatic metagenome
metagenome source
true
metagenomic
Firmicutes bacterium UBA911
http://purl.obolibrary.org/obo/NCBITaxon_1948108
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX748868 metagenome
subsrc_note
Uncultivated Firmicutes bacterium UBA911 genome recovered from SRX748868
title
This BioSample is a metagenomic assembly obtained from the aquatic metagenome reads: SRR1636515.
value