SAMN06451646
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2021-01-27T21:05:03.491Z
INSDC last update
SRS2038413
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2038413
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
76.32%
completeness_estimated
0.00%
contamination_estimated
true
environmental sample
18.32
genome coverage
UBA7190
isolate
rat gut
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
rat gut metagenome
metagenome source
true
metagenomic
Ligilactobacillus murinus
http://purl.obolibrary.org/obo/NCBITaxon_1622
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX803757 metagenome
subsrc_note
Uncultivated Lactobacillus murinus UBA7190 genome recovered from SRX803757
title
This BioSample is a metagenomic assembly obtained from the rat gut metagenome reads: SRR1702559.
value