SAMN06455836
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-09-24T21:02:33.682Z
INSDC last update
SRS2032615
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2032615
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
76.72%
completeness_estimated
3.45%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX211342 metagenome.
description
true
environmental sample
8.19
genome coverage
Canada: Syncrude, Ft. McMurray, Alberta
geo loc name
UBA5634
isolate
waste water
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
hydrocarbon metagenome
metagenome source
true
metagenomic
Thiomicrospira sp. UBA5634
http://purl.obolibrary.org/obo/NCBITaxon_1947683
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX211342 metagenome
subsrc_note
Uncultivated Thioalkalimicrobium sp. UBA5634 genome recovered from SRX211342
title
This BioSample is a metagenomic assembly obtained from the hydrocarbon metagenome reads: SRR636569.
value