SAMN06451112
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:14:35.924Z
INSDC last update
SRS2036509
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2036509
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
81.95%
completeness_estimated
0.75%
http://purl.obolibrary.org/obo/CHEBI_15866
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX803752 metagenome.
description
true
environmental sample
452.69
genome coverage
UBA7043
isolate
rat gut
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
rat gut metagenome
metagenome source
true
metagenomic
Porphyromonadaceae bacterium UBA7043
http://purl.obolibrary.org/obo/NCBITaxon_1952604
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX803752 metagenome
subsrc_note
Uncultivated Porphyromonadaceae bacterium UBA7043 genome recovered from SRX803752
title
This BioSample is a metagenomic assembly obtained from the rat gut metagenome reads: SRR1702554.
value