SAMN06450716
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2020-11-30T21:04:46.866Z
INSDC last update
SRS2030472
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2030472
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
95.11%
completeness_estimated
0.00%
contamination_estimated
Uncultivated genome recovered from an assembly of the ERX222797 metagenome.
description
true
environmental sample
51.35
genome coverage
UBA626
isolate
gut of vertebrate mammal
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
gut metagenome
metagenome source
true
metagenomic
Ligilactobacillus ruminis
http://purl.obolibrary.org/obo/NCBITaxon_1623
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in ERX222797 metagenome
subsrc_note
Uncultivated Lactobacillus ruminis UBA626 genome recovered from ERX222797
title
This BioSample is a metagenomic assembly obtained from the gut metagenome reads: ERR248263.
value