SAMN06453409
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:19:41.042Z
INSDC last update
SRS2032294
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2032294
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
94.72%
completeness_estimated
0.54%
http://purl.obolibrary.org/obo/CHEBI_34648
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX144200 metagenome.
description
true
environmental sample
79.39
genome coverage
UBA1344
isolate
bioreactor
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
bioreactor metagenome
metagenome source
true
metagenomic
Epsilonproteobacteria bacterium UBA1344
http://purl.obolibrary.org/obo/NCBITaxon_1948568
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX144200 metagenome
subsrc_note
Uncultivated Epsilonproteobacteria bacterium UBA1344 genome recovered from SRX144200
title
This BioSample is a metagenomic assembly obtained from the bioreactor metagenome reads: SRR490746.
value