SAMN06457169
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2035592
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2035592
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
91.38%
completeness_estimated
1.31%
contamination_estimated
true
environmental sample
11.97
genome coverage
UBA1157
isolate
murine gut
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
gut metagenome
metagenome source
true
metagenomic
Bifidobacterium pseudolongum
http://purl.obolibrary.org/obo/NCBITaxon_1694
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX688074 metagenome
subsrc_note
Uncultivated Bifidobacterium pseudolongum UBA1157 genome recovered from SRX688074
title
This BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR1559580.
value