SAMN06457866
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:04:42.614Z
INSDC last update
SRS2031526
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2031526
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
77.61%
completeness_estimated
0.43%
contamination_estimated
Uncultivated genome recovered from an assembly of the ERX556098 metagenome.
description
true
environmental sample
166.32
genome coverage
UBA3522
isolate
saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
marine metagenome
metagenome source
true
metagenomic
Candidatus Microthrix sp. UBA3522
http://purl.obolibrary.org/obo/NCBITaxon_1946184
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in ERX556098 metagenome
subsrc_note
Uncultivated Candidatus Microthrix sp. UBA3522 genome recovered from ERX556098
title
This BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR599130.
value