SAMN06455874
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2036495
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2036495
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
95.03%
completeness_estimated
0.86%
contamination_estimated
true
environmental sample
158.51
genome coverage
UBA7050
isolate
rat gut
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
rat gut metagenome
metagenome source
true
metagenomic
Lachnospiraceae bacterium UBA7050
http://purl.obolibrary.org/obo/NCBITaxon_1952127
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX803752 metagenome
subsrc_note
Uncultivated Lachnospiraceae bacterium UBA7050 genome recovered from SRX803752
title
This BioSample is a metagenomic assembly obtained from the rat gut metagenome reads: SRR1702554.
value