SAMN06455352
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2035508
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2035508
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
96.33%
completeness_estimated
0.67%
contamination_estimated
true
environmental sample
24.93
genome coverage
Brazil: Amazon River
geo loc name
UBA5216
isolate
water
http://purl.obolibrary.org/obo/CHEBI_15377
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
aquatic metagenome
metagenome source
true
metagenomic
Betaproteobacteria bacterium UBA5216
http://purl.obolibrary.org/obo/NCBITaxon_1948459
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX866631 metagenome
subsrc_note
Uncultivated Betaproteobacteria bacterium UBA5216 genome recovered from SRX866631
title
This BioSample is a metagenomic assembly obtained from the aquatic metagenome reads: SRR1790678.
value