SAMN06454001
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-09-12T09:03:57.120Z
INSDC last update
SRS2039217
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2039217
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
92.73%
completeness_estimated
0.49%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX822774 metagenome.
description
TRUE
environmental sample
31.46
genome coverage
USA:New York City
geo loc name
UBA3241
isolate
New York City MTA subway
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
terrestrial metagenome
metagenome source
TRUE
metagenomic
Brevundimonas naejangsanensis
http://purl.obolibrary.org/obo/NCBITaxon_588932
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX822774 metagenome
subsrc_note
Uncultivated Brevundimonas naejangsanensis UBA3241 genome recovered from SRX822774
title
This BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749391.
value