SAMN06455167
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:21:11.403Z
INSDC last update
SRS2034605
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2034605
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
94.89%
completeness_estimated
0.59%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX823116 metagenome.
description
true
environmental sample
82.31
genome coverage
USA:New York City
geo loc name
UBA2302
isolate
metal/plastic
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
terrestrial metagenome
metagenome source
true
metagenomic
Stenotrophomonas sp. UBA2302
http://purl.obolibrary.org/obo/NCBITaxon_1947551
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX823116 metagenome
subsrc_note
Uncultivated Stenotrophomonas sp. UBA2302 genome recovered from SRX823116
title
This BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749733.
value