SAMN06452789
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2034177
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2034177
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
94.88%
completeness_estimated
1.63%
contamination_estimated
true
environmental sample
18.01
genome coverage
USA: Chicago Lake Michigan
geo loc name
UBA2476
isolate
water
http://purl.obolibrary.org/obo/CHEBI_15377
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
viral metagenome
metagenome source
true
metagenomic
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX550904 metagenome
subsrc_note
Uncultivated Asticcacaulis sp. UBA2476 genome recovered from SRX550904
title
This BioSample is a metagenomic assembly obtained from the viral metagenome reads: SRR1296481.
value