SAMN06456234
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2035530
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2035530
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
70.59%
completeness_estimated
2.20%
contamination_estimated
true
environmental sample
15.79
genome coverage
Mexico: oxygen minimum zone off the coast of Manzanillo
geo loc name
UBA3122
isolate
water
http://purl.obolibrary.org/obo/CHEBI_15377
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
marine metagenome
metagenome source
true
metagenomic
Candidatus Marinimicrobia bacterium UBA3122
http://purl.obolibrary.org/obo/NCBITaxon_1953234
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX648502 metagenome
subsrc_note
Uncultivated Candidatus Marinimicrobia bacterium UBA3122 genome recovered from SRX648502
title
This BioSample is a metagenomic assembly obtained from the marine metagenome reads: SRR1509799.
value