SAMN06454008
External Id
University of Queensland
INSDC center name
2017-08-23T00:00:00Z
INSDC first public
2017-08-23T12:30:04.711Z
INSDC last update
SRS2031509
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2031509
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
72.72%
completeness_estimated
0.00%
contamination_estimated
Uncultivated genome recovered from an assembly of the ERX556088 metagenome.
description
true
environmental sample
134.79
genome coverage
UBA4158
isolate
saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
marine metagenome
metagenome source
true
metagenomic
Candidatus Atelocyanobacterium thalassa UBA4158
http://purl.obolibrary.org/obo/NCBITaxon_2028569
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in ERX556088 metagenome
subsrc_note
Uncultivated Candidatus Atelocyanobacterium thalassa UBA4158 genome recovered from ERX556088
title
This BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR599006.
value