SAMN06455466
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2036290
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2036290
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
91.54%
completeness_estimated
0.54%
http://purl.obolibrary.org/obo/CHEBI_34648
contamination_estimated
true
environmental sample
13.43
genome coverage
Costa Rica:Cuenca Murcielago
geo loc name
UBA1002
isolate
Cuenca Murcielago travertine
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
aquatic metagenome
metagenome source
true
metagenomic
Alphaproteobacteria bacterium UBA1002
http://purl.obolibrary.org/obo/NCBITaxon_1948350
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX748871 metagenome
subsrc_note
Uncultivated Alphaproteobacteria bacterium UBA1002 genome recovered from SRX748871
title
This BioSample is a metagenomic assembly obtained from the aquatic metagenome reads: SRR1636511.
value