SAMN06453458
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2036121
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2036121
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
89.60%
completeness_estimated
1.64%
contamination_estimated
true
environmental sample
14.86
genome coverage
Spain: Alfacada pond, Ebro delta, Tarragona
geo loc name
UBA1834
isolate
epidermal mucus of Anguilla anguilla fishes in Ebro delta
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
fish metagenome
metagenome source
true
metagenomic
Burkholderiales bacterium UBA1834
http://purl.obolibrary.org/obo/NCBITaxon_1950768
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX702749 metagenome
subsrc_note
Uncultivated Burkholderiales bacterium UBA1834 genome recovered from SRX702749
title
This BioSample is a metagenomic assembly obtained from the fish metagenome reads: SRR1578065.
value