SAMN06457558
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:03:49.245Z
INSDC last update
SRS2035664
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2035664
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
73.87%
completeness_estimated
0.54%
http://purl.obolibrary.org/obo/CHEBI_34648
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX691266 metagenome.
description
true
environmental sample
83.83
genome coverage
China: Luzhou
geo loc name
UBA5262
isolate
mud
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
fermentation metagenome
metagenome source
true
metagenomic
Oblitimonas sp. UBA5262
http://purl.obolibrary.org/obo/NCBITaxon_1947005
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX691266 metagenome
subsrc_note
Uncultivated Oblitimonas sp. UBA5262 genome recovered from SRX691266
title
This BioSample is a metagenomic assembly obtained from the fermentation metagenome reads: SRR1561991.
value