SAMN06454902
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2036072
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2036072
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
87.79%
completeness_estimated
0.42%
contamination_estimated
true
environmental sample
9.33
genome coverage
China: Mianyang
geo loc name
UBA5516
isolate
mud
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
fermentation metagenome
metagenome source
true
metagenomic
Firmicutes bacterium UBA5516
http://purl.obolibrary.org/obo/NCBITaxon_1948073
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX691285 metagenome
subsrc_note
Uncultivated Firmicutes bacterium UBA5516 genome recovered from SRX691285
title
This BioSample is a metagenomic assembly obtained from the fermentation metagenome reads: SRR1562010.
value