SAMN06455873
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T12:58:23.920Z
INSDC last update
SRS2034727
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2034727
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
97.08%
completeness_estimated
2.91%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX823221 metagenome.
description
true
environmental sample
12.27
genome coverage
USA:New York City
geo loc name
UBA7503
isolate
metal/plastic
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
terrestrial metagenome
metagenome source
true
metagenomic
Clostridium sp. UBA7503
http://purl.obolibrary.org/obo/NCBITaxon_1946377
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX823221 metagenome
subsrc_note
Uncultivated Clostridium sp. UBA7503 genome recovered from SRX823221
title
This BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749842.
value