SAMN06452098
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2032143
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2032143
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
86.06%
completeness_estimated
0.84%
contamination_estimated
true
environmental sample
6.45
genome coverage
Atlantic Ocean:Mid Cayman Rise
geo loc name
UBA1149
isolate
Beebe hydrothermal vent plume at at depth of 4900m
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
hydrothermal vent metagenome
metagenome source
true
metagenomic
bacterium UBP10_UBA1149
http://purl.obolibrary.org/obo/NCBITaxon_1953411
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX1075082 metagenome
subsrc_note
Uncultivated bacterium UBP10_UBA1149 genome recovered from SRX1075082
title
This BioSample is a metagenomic assembly obtained from the hydrothermal vent metagenome reads: SRR2080393.
value