SAMN06455035
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2036462
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2036462
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
88.58%
completeness_estimated
1.53%
contamination_estimated
true
environmental sample
113.43
genome coverage
UBA3263
isolate
rat gut
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
rat gut metagenome
metagenome source
true
metagenomic
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX803751 metagenome
subsrc_note
Uncultivated Porphyromonadaceae bacterium UBA3263 genome recovered from SRX803751
title
This BioSample is a metagenomic assembly obtained from the rat gut metagenome reads: SRR1702553.
value