SAMN06452214
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:15:48.481Z
INSDC last update
SRS2034709
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2034709
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
95.58%
completeness_estimated
2.07%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX823218 metagenome.
description
true
environmental sample
8.43
genome coverage
USA:New York City
geo loc name
UBA6758
isolate
plastic
http://www.ebi.ac.uk/efo/EFO_0009642
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
terrestrial metagenome
metagenome source
true
metagenomic
Clostridium sp. UBA6758
http://purl.obolibrary.org/obo/NCBITaxon_1946372
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX823218 metagenome
subsrc_note
Uncultivated Clostridium sp. UBA6758 genome recovered from SRX823218
title
This BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749835.
value