SAMN06451507
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2034352
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2034352
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
89.77%
completeness_estimated
1.98%
contamination_estimated
true
environmental sample
24.43
genome coverage
USA: Coal Oil Point, Santa Barbara, California
geo loc name
UBA2777
isolate
Oil polluted marine water
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
marine metagenome
metagenome source
true
metagenomic
Dehalococcoidia bacterium UBA2777
http://purl.obolibrary.org/obo/NCBITaxon_1948487
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX560108 metagenome
subsrc_note
Uncultivated Dehalococcoidia bacterium UBA2777 genome recovered from SRX560108
title
This BioSample is a metagenomic assembly obtained from the marine metagenome reads: SRR1313734.
value