SAMN06453154
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:17:00.219Z
INSDC last update
SRS2035509
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2035509
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
73.27%
completeness_estimated
0.00%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX865668 metagenome.
description
true
environmental sample
16.4
genome coverage
Brazil: Amazon River
geo loc name
UBA910
isolate
water
http://purl.obolibrary.org/obo/CHEBI_15377
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
aquatic metagenome
metagenome source
true
metagenomic
Patescibacteria group bacterium UBA910
http://purl.obolibrary.org/obo/NCBITaxon_1948866
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX865668 metagenome
subsrc_note
Uncultivated Patescibacteria group bacterium UBA910 genome recovered from SRX865668
title
This BioSample is a metagenomic assembly obtained from the aquatic metagenome reads: SRR1788318.
value