SAMN06455126
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2034328
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2034328
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
85.31%
completeness_estimated
1.10%
contamination_estimated
true
environmental sample
49.47
genome coverage
USA: Coal Oil Point, Santa Barbara, California
geo loc name
UBA3079
isolate
Oil polluted marine water
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
marine metagenome
metagenome source
true
metagenomic
candidate division WOR-3 bacterium UBA3079
http://purl.obolibrary.org/obo/NCBITaxon_1948311
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX559946 metagenome
subsrc_note
Uncultivated candidate division WOR-3 bacterium UBA3079 genome recovered from SRX559946
title
This BioSample is a metagenomic assembly obtained from the marine metagenome reads: SRR1313318.
value