SAMN06455650
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2036129
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2036129
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
93.55%
completeness_estimated
1.04%
http://purl.obolibrary.org/obo/PO_0007115
contamination_estimated
TRUE
environmental sample
23.11
genome coverage
Spain: Alfacada pond, Ebro delta, Tarragona
geo loc name
UBA4199
isolate
epidermal mucus of Anguilla anguilla fishes in Ebro delta
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
fish metagenome
metagenome source
TRUE
metagenomic
Originally submitted as Acinetobacter haemolyticus but changed in October 2018 because of ANI results to Acinetobacter venetianus
note
Acinetobacter venetianus
http://purl.obolibrary.org/obo/NCBITaxon_52133
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX703649 metagenome
subsrc_note
Uncultivated Acinetobacter haemolyticus UBA4199 genome recovered from SRX703649
title
This BioSample is a metagenomic assembly obtained from the fish metagenome reads: SRR1578068.
value