SAMN06450693
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2032255
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2032255
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
92.82%
completeness_estimated
1.36%
contamination_estimated
true
environmental sample
49.26
genome coverage
USA:Highgate Springs, VT
geo loc name
UBA5020
isolate
freshwater
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
freshwater metagenome
metagenome source
true
metagenomic
Akkermansiaceae bacterium UBA5020
http://purl.obolibrary.org/obo/NCBITaxon_1951364
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX1203503 metagenome
subsrc_note
Uncultivated Akkermansiaceae bacterium UBA5020 genome recovered from SRX1203503
title
This BioSample is a metagenomic assembly obtained from the freshwater metagenome reads: SRR2179959.
value