SAMN06452811
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2039164
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2039164
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
94.51%
completeness_estimated
1.55%
http://purl.obolibrary.org/obo/CHEBI_16236
contamination_estimated
true
environmental sample
10.19
genome coverage
USA:New York City
geo loc name
UBA3877
isolate
wood
http://purl.obolibrary.org/obo/PO_0005352
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
terrestrial metagenome
metagenome source
true
metagenomic
Leuconostoc citreum
http://purl.obolibrary.org/obo/NCBITaxon_33964
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX822743 metagenome
subsrc_note
Uncultivated Leuconostoc citreum UBA3877 genome recovered from SRX822743
title
This BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749360.
value