SAMN06454787
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2031108
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2031108
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
89.79%
completeness_estimated
1.08%
contamination_estimated
true
environmental sample
19.23
genome coverage
UBA2519
isolate
saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
marine metagenome
metagenome source
true
metagenomic
Actinobacteria bacterium UBA2519
http://purl.obolibrary.org/obo/NCBITaxon_1948326
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in ERX555907 metagenome
subsrc_note
Uncultivated Actinobacteria bacterium UBA2519 genome recovered from ERX555907
title
This BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR598942.
value