SAMN06452367
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2030550
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2030550
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
93.52%
completeness_estimated
0.93%
contamination_estimated
true
environmental sample
28.14
genome coverage
Malaysia
geo loc name
UBA1398
isolate
closed biodigester
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
palm oil mill effluent metagenome
metagenome source
true
metagenomic
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in ERX250271 metagenome
subsrc_note
Uncultivated Armatimonadetes bacterium UBA1398 genome recovered from ERX250271
title
This BioSample is a metagenomic assembly obtained from the palm oil mill effluent metagenome reads: ERR276848.
value