SAMN06455567
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T12:58:15.924Z
INSDC last update
SRS2032270
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2032270
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
82.81%
completeness_estimated
0.22%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX1363838 metagenome.
description
true
environmental sample
11.85
genome coverage
Colombia: Santander de Quilichao
geo loc name
UBA5809
isolate
cassava fermentation tank
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
fermentation metagenome
metagenome source
true
metagenomic
Veillonellaceae bacterium UBA5809
http://purl.obolibrary.org/obo/NCBITaxon_1953090
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX1363838 metagenome
subsrc_note
Uncultivated Veillonellaceae bacterium UBA5809 genome recovered from SRX1363838
title
This BioSample is a metagenomic assembly obtained from the fermentation metagenome reads: SRR2753157.
value