SAMN06450797
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2036251
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2036251
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
86.82%
completeness_estimated
2.27%
contamination_estimated
true
environmental sample
25.16
genome coverage
Pacific Ocean
geo loc name
UBA3568
isolate
sediment
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
marine sediment metagenome
metagenome source
true
metagenomic
Nitrospiraceae bacterium UBA3568
http://purl.obolibrary.org/obo/NCBITaxon_1952980
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX742693 metagenome
subsrc_note
Uncultivated Nitrospiraceae bacterium UBA3568 genome recovered from SRX742693
title
This BioSample is a metagenomic assembly obtained from the marine sediment metagenome reads: SRR1628698.
value