SAMN06452577
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:16:44.336Z
INSDC last update
SRS2033477
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2033477
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
95.81%
completeness_estimated
0.22%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX327722 metagenome.
description
true
environmental sample
110.03
genome coverage
Canada: Suncor tailings pond 6
geo loc name
UBA2189
isolate
suncor tailing pond 6 meters
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
hydrocarbon metagenome
metagenome source
true
metagenomic
Geobacter sp. UBA2189
http://purl.obolibrary.org/obo/NCBITaxon_1961389
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX327722 metagenome
subsrc_note
Uncultivated Geobacter sp. UBA2189 genome recovered from SRX327722
title
This BioSample is a metagenomic assembly obtained from the hydrocarbon metagenome reads: SRR943330,SRR943329,SRR942941,SRR943334,SRR943332,SRR943333,SRR943331.
value