SAMN06456467
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:03:26.645Z
INSDC last update
SRS2036472
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2036472
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
69.44%
completeness_estimated
0.00%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX803751 metagenome.
description
true
environmental sample
490.5
genome coverage
UBA3256
isolate
rat gut
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
rat gut metagenome
metagenome source
true
metagenomic
Prevotella sp. UBA3256
http://purl.obolibrary.org/obo/NCBITaxon_1947132
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX803751 metagenome
subsrc_note
Uncultivated Prevotella sp. UBA3256 genome recovered from SRX803751
title
This BioSample is a metagenomic assembly obtained from the rat gut metagenome reads: SRR1702553.
value