SAMN06453426
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:19:41.484Z
INSDC last update
SRS2038653
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2038653
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
99.59%
completeness_estimated
0.00%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX822244 metagenome.
description
true
environmental sample
217.09
genome coverage
USA:New York City
geo loc name
UBA5643
isolate
metal
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
terrestrial metagenome
metagenome source
true
metagenomic
Bacillus pumilus
http://purl.obolibrary.org/obo/NCBITaxon_1408
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX822244 metagenome
subsrc_note
Uncultivated Bacillus pumilus UBA5643 genome recovered from SRX822244
title
This BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1748861.
value