SAMN06298043
External Id
Walter Reed Army Institute of Research
INSDC center name
2017-07-11T12:37:29.080Z
INSDC first public
2017-07-11T12:37:29.080Z
INSDC last update
SRS1958220
INSDC secondary accession
live
INSDC status
Pathogen.cl
NCBI submission model
Pathogen.cl.1.0
NCBI submission package
SRS1958220
SRA accession
MHRP
collected by
2010
collection date
5
days since first positive nucleic-acid testing
Targeted deep sequencing of HIV-1 Pol (HXB2 coordinates: 2115-2272) amplified by nested PCR from plasma sample obtained 5 days since first positive nucleic-acid testing from participant RV217_20225
description
Kenya
geo loc name
Homo sapiens
http://purl.obolibrary.org/obo/NCBITaxon_9606
host
HIV infection
http://www.ebi.ac.uk/efo/EFO_0000764
host disease
female
http://purl.obolibrary.org/obo/PATO_0000383
host sex
A1/C recombinant
isolate
blood plasma
http://purl.obolibrary.org/obo/UBERON_0001969
isolation source
0.3689 S 35.2863 E
lat lon
Human immunodeficiency virus 1
http://purl.obolibrary.org/obo/NCBITaxon_11676
organism
Pol
http://www.orpha.net/ORDO/Orphanet_289494
subgenomic region
RV217_20225_day05_Pol
title