SAMN06457341
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:03:43.163Z
INSDC last update
SRS2032590
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2032590
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
55.19%
completeness_estimated
0.49%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX211004 metagenome.
description
true
environmental sample
89.05
genome coverage
Canada: Alberta
geo loc name
UBA4044
isolate
coal bed cutting
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
hydrocarbon metagenome
metagenome source
true
metagenomic
Thauera sp. UBA4044
http://purl.obolibrary.org/obo/NCBITaxon_1947678
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX211004 metagenome
subsrc_note
Uncultivated Thauera sp. UBA4044 genome recovered from SRX211004
title
This BioSample is a metagenomic assembly obtained from the hydrocarbon metagenome reads: SRR636570.
value