SAMN06454028
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2035058
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2035058
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
96.33%
completeness_estimated
8.06%
contamination_estimated
true
environmental sample
20.26
genome coverage
Kenya
geo loc name
UBA6357
isolate
feces
http://purl.obolibrary.org/obo/NCIT_C13234
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
gut metagenome
metagenome source
true
metagenomic
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX834625 metagenome
subsrc_note
Uncultivated Collinsella sp. UBA6357 genome recovered from SRX834625
title
This BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR1747024.
value