SAMN06456537
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:03:28.720Z
INSDC last update
SRS2033639
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2033639
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
72.57%
completeness_estimated
3.45%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX331749 metagenome.
description
true
environmental sample
14.8
genome coverage
USA: Wyoming
geo loc name
UBA7735
isolate
Rumen fluid
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
gut metagenome
metagenome source
true
metagenomic
Prevotella sp. UBA7735
http://purl.obolibrary.org/obo/NCBITaxon_1947229
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX331749 metagenome
subsrc_note
Uncultivated Prevotella sp. UBA7735 genome recovered from SRX331749
title
This BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR948132.
value