SAMN06457750
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:04:39.444Z
INSDC last update
SRS2033619
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2033619
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
64.66%
completeness_estimated
0.00%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX331741 metagenome.
description
true
environmental sample
9.07
genome coverage
USA: Wyoming
geo loc name
UBA7782
isolate
Rumen fluid
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
gut metagenome
metagenome source
true
metagenomic
Prevotella sp. UBA7782
http://purl.obolibrary.org/obo/NCBITaxon_1947238
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX331741 metagenome
subsrc_note
Uncultivated Prevotella sp. UBA7782 genome recovered from SRX331741
title
This BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR948125.
value