SAMN06450402
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:14:16.739Z
INSDC last update
SRS2033915
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2033915
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
74.16%
completeness_estimated
2.06%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX472115 metagenome.
description
true
environmental sample
6.78
genome coverage
Hong Kong
http://identifiers.org/medgen/C4017271
geo loc name
UBA5540
isolate
water
http://purl.obolibrary.org/obo/CHEBI_15377
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
wastewater metagenome
metagenome source
true
metagenomic
Verrucomicrobia bacterium UBA5540
http://purl.obolibrary.org/obo/NCBITaxon_1948267
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX472115 metagenome
subsrc_note
Uncultivated Verrucomicrobia bacterium UBA5540 genome recovered from SRX472115
title
This BioSample is a metagenomic assembly obtained from the wastewater metagenome reads: SRR1171178.
value