SAMN06457358
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:03:43.644Z
INSDC last update
SRS2034210
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2034210
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
70.25%
completeness_estimated
1.94%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX559898 metagenome.
description
true
environmental sample
10.32
genome coverage
Canada: Northern Alberta
geo loc name
UBA2294
isolate
biofilm
http://purl.obolibrary.org/obo/BTO_0002690
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
hydrocarbon metagenome
metagenome source
true
metagenomic
Desulfuromonadaceae bacterium UBA2294
http://purl.obolibrary.org/obo/NCBITaxon_1961570
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX559898 metagenome
subsrc_note
Uncultivated Desulfuromonadaceae bacterium UBA2294 genome recovered from SRX559898
title
This BioSample is a metagenomic assembly obtained from the hydrocarbon metagenome reads: SRR1313259,SRR1313257,SRR1313264,SRR1313260,SRR1313258,SRR1313261.
value