SAMN06452967
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:16:54.999Z
INSDC last update
SRS2032684
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2032684
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
88.97%
completeness_estimated
3.69%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX252167 metagenome.
description
true
environmental sample
13.12
genome coverage
United Kingdom: England
geo loc name
UBA1825
isolate
Cecal contents
http://purl.jp/bio/11/meo/MEO_0000970
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
chicken gut metagenome
metagenome source
true
metagenomic
Alistipes sp. UBA1825
http://purl.obolibrary.org/obo/NCBITaxon_1946009
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX252167 metagenome
subsrc_note
Uncultivated Alistipes sp. UBA1825 genome recovered from SRX252167
title
This BioSample is a metagenomic assembly obtained from the chicken gut metagenome reads: SRR789046.
value