SAMN06450848
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:14:28.810Z
INSDC last update
SRS2033816
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2033816
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
91.94%
completeness_estimated
1.09%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX404361 metagenome.
description
true
environmental sample
11.47
genome coverage
Australia: Brisbane, Thorneside Wastewater Treatment Plant
geo loc name
UBA6667
isolate
activated sludge
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
bioreactor sludge metagenome
metagenome source
true
metagenomic
Ignavibacteria bacterium UBA6667
http://purl.obolibrary.org/obo/NCBITaxon_1948682
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX404361 metagenome
subsrc_note
Uncultivated Ignavibacteria bacterium UBA6667 genome recovered from SRX404361
title
This BioSample is a metagenomic assembly obtained from the bioreactor sludge metagenome reads: SRR1068202.
value