SAMN06456221
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T12:58:33.363Z
INSDC last update
SRS2032829
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2032829
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
87.33%
completeness_estimated
0.60%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX290706 metagenome.
description
true
environmental sample
45.8
genome coverage
UBA4264
isolate
low methane producing sheep
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
gut metagenome
metagenome source
true
metagenomic
Megasphaera sp. UBA4264
http://purl.obolibrary.org/obo/NCBITaxon_1946848
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX290706 metagenome
subsrc_note
Uncultivated Megasphaera sp. UBA4264 genome recovered from SRX290706
title
This BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR873596.
value