SAMN06450506
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:14:19.725Z
INSDC last update
SRS2031270
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2031270
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
87.83%
completeness_estimated
7.42%
contamination_estimated
Uncultivated genome recovered from an assembly of the ERX555967 metagenome.
description
true
environmental sample
13.14
genome coverage
UBA1532
isolate
saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
marine metagenome
metagenome source
true
metagenomic
Myxococcales bacterium UBA1532
http://purl.obolibrary.org/obo/NCBITaxon_1961461
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in ERX555967 metagenome
subsrc_note
Uncultivated Myxococcales bacterium UBA1532 genome recovered from ERX555967
title
This BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR599052.
value