SAMN06451498
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2036260
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2036260
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
78.75%
completeness_estimated
1.02%
http://purl.obolibrary.org/obo/PO_0007098
contamination_estimated
true
environmental sample
38.96
genome coverage
South Africa:Carltonville
geo loc name
UBA2598
isolate
water
http://purl.obolibrary.org/obo/CHEBI_15377
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
groundwater metagenome
metagenome source
true
metagenomic
Firmicutes bacterium UBA2598
http://purl.obolibrary.org/obo/NCBITaxon_1947956
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX745164 metagenome
subsrc_note
Uncultivated Firmicutes bacterium UBA2598 genome recovered from SRX745164
title
This BioSample is a metagenomic assembly obtained from the groundwater metagenome reads: SRR1633224.
value