SAMN06456931
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2030588
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2030588
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
84.87%
completeness_estimated
5.00%
contamination_estimated
true
environmental sample
10.38
genome coverage
UBA1270
isolate
saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
marine metagenome
metagenome source
true
metagenomic
Proteobacteria bacterium UBA1270
http://purl.obolibrary.org/obo/NCBITaxon_1948132
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in ERX289008 metagenome
subsrc_note
Uncultivated Proteobacteria bacterium UBA1270 genome recovered from ERX289008
title
This BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR315860.
value