SAMN06453113
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:16:59.067Z
INSDC last update
SRS2035587
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2035587
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
99.58%
completeness_estimated
0.84%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX685735 metagenome.
description
true
environmental sample
16.64
genome coverage
USA: near Green River, Utah
geo loc name
UBA3091
isolate
water
http://purl.obolibrary.org/obo/CHEBI_15377
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
groundwater metagenome
metagenome source
true
metagenomic
Mariprofundus sp. UBA3091
http://purl.obolibrary.org/obo/NCBITaxon_1946832
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX685735 metagenome
subsrc_note
Uncultivated Mariprofundus sp. UBA3091 genome recovered from SRX685735
title
This BioSample is a metagenomic assembly obtained from the groundwater metagenome reads: SRR1556897.
value