SAMN06451777
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2032235
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2032235
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
90.21%
completeness_estimated
0.52%
contamination_estimated
true
environmental sample
73.71
genome coverage
UBA1303
isolate
soil
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
soil metagenome
http://purl.obolibrary.org/obo/NCBITaxon_410658
metagenome source
true
metagenomic
Alphaproteobacteria bacterium UBA1303
http://purl.obolibrary.org/obo/NCBITaxon_1948357
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX118448 metagenome
subsrc_note
Uncultivated Alphaproteobacteria bacterium UBA1303 genome recovered from SRX118448
title
This BioSample is a metagenomic assembly obtained from the soil metagenome reads: SRR404117.
value