SAMN06454772
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:21:00.934Z
INSDC last update
SRS2032224
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2032224
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
92.75%
completeness_estimated
1.66%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX118448 metagenome.
description
true
environmental sample
20.93
genome coverage
UBA1310
isolate
soil
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
soil metagenome
http://purl.obolibrary.org/obo/NCBITaxon_410658
metagenome source
true
metagenomic
Rhodocyclaceae bacterium UBA1310
http://purl.obolibrary.org/obo/NCBITaxon_1952835
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX118448 metagenome
subsrc_note
Uncultivated Rhodocyclaceae bacterium UBA1310 genome recovered from SRX118448
title
This BioSample is a metagenomic assembly obtained from the soil metagenome reads: SRR404117.
value