SAMN06454505
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2034389
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2034389
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
70.18%
completeness_estimated
0.88%
contamination_estimated
true
environmental sample
28.7
genome coverage
USA: Lake Washington
geo loc name
UBA6706
isolate
sediment
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
freshwater sediment metagenome
metagenome source
true
metagenomic
Methylobacter tundripaludum
http://purl.obolibrary.org/obo/NCBITaxon_173365
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX644737 metagenome
subsrc_note
Uncultivated Methylobacter tundripaludum UBA6706 genome recovered from SRX644737
title
This BioSample is a metagenomic assembly obtained from the freshwater sediment metagenome reads: SRR1505173.
value