SAMN06451497
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2036261
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2036261
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
90.08%
completeness_estimated
0.85%
contamination_estimated
true
environmental sample
35.32
genome coverage
South Africa:Carltonville
geo loc name
UBA2599
isolate
water
http://purl.obolibrary.org/obo/CHEBI_15377
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
groundwater metagenome
metagenome source
true
metagenomic
Thermus scotoductus
http://purl.obolibrary.org/obo/NCBITaxon_37636
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX745164 metagenome
subsrc_note
Uncultivated Thermus scotoductus UBA2599 genome recovered from SRX745164
title
This BioSample is a metagenomic assembly obtained from the groundwater metagenome reads: SRR1633224.
value