SAMN06455143
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:21:10.760Z
INSDC last update
SRS2033921
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2033921
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
57.73%
completeness_estimated
0.52%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX472115 metagenome.
description
true
environmental sample
48.7
genome coverage
Hong Kong
http://identifiers.org/medgen/C4017271
geo loc name
UBA5533
isolate
water
http://purl.obolibrary.org/obo/CHEBI_15377
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
wastewater metagenome
metagenome source
true
metagenomic
Rhodocyclaceae bacterium UBA5533
http://purl.obolibrary.org/obo/NCBITaxon_1952844
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX472115 metagenome
subsrc_note
Uncultivated Rhodocyclaceae bacterium UBA5533 genome recovered from SRX472115
title
This BioSample is a metagenomic assembly obtained from the wastewater metagenome reads: SRR1171178.
value