SAMN06454020
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:19:57.313Z
INSDC last update
SRS2031847
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2031847
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
96.25%
completeness_estimated
0.83%
contamination_estimated
Uncultivated genome recovered from an assembly of the ERX943717 metagenome.
description
true
environmental sample
32.02
genome coverage
UBA3438
isolate
Columbia River plume, salinty 25
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
marine metagenome
metagenome source
true
metagenomic
Rhodobacteraceae bacterium UBA3438
http://purl.obolibrary.org/obo/NCBITaxon_1952805
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in ERX943717 metagenome
subsrc_note
Uncultivated Rhodobacteraceae bacterium UBA3438 genome recovered from ERX943717
title
This BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR864073.
value