SAMN06455815
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T12:58:22.362Z
INSDC last update
SRS2036241
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2036241
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
87.29%
completeness_estimated
0.50%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX742691 metagenome.
description
true
environmental sample
215.75
genome coverage
Pacific Ocean
geo loc name
UBA3570
isolate
sediment
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
marine sediment metagenome
metagenome source
true
metagenomic
Firmicutes bacterium UBA3570
http://purl.obolibrary.org/obo/NCBITaxon_1947966
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX742691 metagenome
subsrc_note
Uncultivated Firmicutes bacterium UBA3570 genome recovered from SRX742691
title
This BioSample is a metagenomic assembly obtained from the marine sediment metagenome reads: SRR1628696.
value