SAMN06457736
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2038383
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2038383
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
70.69%
completeness_estimated
0.86%
contamination_estimated
true
environmental sample
24.28
genome coverage
UBA7162
isolate
rat gut
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
rat gut metagenome
metagenome source
true
metagenomic
Clostridiales bacterium UBA7162
http://purl.obolibrary.org/obo/NCBITaxon_1950925
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX803756 metagenome
subsrc_note
Uncultivated Clostridiales bacterium UBA7162 genome recovered from SRX803756
title
This BioSample is a metagenomic assembly obtained from the rat gut metagenome reads: SRR1702558.
value