SAMN06450747
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:14:26.109Z
INSDC last update
SRS2033215
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2033215
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
92.67%
completeness_estimated
2.26%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX317535 metagenome.
description
true
environmental sample
32.49
genome coverage
Australia
geo loc name
UBA5799
isolate
water
http://purl.obolibrary.org/obo/CHEBI_15377
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
bioreactor metagenome
metagenome source
true
metagenomic
Deltaproteobacteria bacterium UBA5799
http://purl.obolibrary.org/obo/NCBITaxon_1948558
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX317535 metagenome
subsrc_note
Uncultivated Deltaproteobacteria bacterium UBA5799 genome recovered from SRX317535
title
This BioSample is a metagenomic assembly obtained from the bioreactor metagenome reads: SRR925398.
value