SAMN06457019
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2032360
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2032360
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
89.60%
completeness_estimated
0.85%
contamination_estimated
true
environmental sample
99.34
genome coverage
UBA6725
isolate
deep-sea sponge Neamphius huxleyi
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
Neamphius huxleyi metagenome
metagenome source
true
metagenomic
Agrobacterium tumefaciens
http://purl.obolibrary.org/obo/NCBITaxon_358
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX147859 metagenome
subsrc_note
Uncultivated Agrobacterium tumefaciens UBA6725 genome recovered from SRX147859
title
This BioSample is a metagenomic assembly obtained from the Neamphius huxleyi metagenome reads: SRR496756.
value