SAMN06456488
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:03:27.381Z
INSDC last update
SRS2033039
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2033039
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
96.16%
completeness_estimated
0.00%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX290713 metagenome.
description
true
environmental sample
88.78
genome coverage
UBA3626
isolate
high methane producing sheep
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
gut metagenome
metagenome source
true
metagenomic
Pseudobutyrivibrio sp. UBA3626
http://purl.obolibrary.org/obo/NCBITaxon_1947297
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX290713 metagenome
subsrc_note
Uncultivated Pseudobutyrivibrio sp. UBA3626 genome recovered from SRX290713
title
This BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR873603.
value