SAMN06454499
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:20:53.742Z
INSDC last update
SRS2033972
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2033972
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
85.48%
completeness_estimated
1.39%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX481090 metagenome.
description
true
environmental sample
12.34
genome coverage
UBA7473
isolate
freshwater
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
metagenome
metagenome source
true
metagenomic
Sphingomonadales bacterium UBA7473
http://purl.obolibrary.org/obo/NCBITaxon_1951263
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX481090 metagenome
subsrc_note
Uncultivated Sphingomonadales bacterium UBA7473 genome recovered from SRX481090
title
This BioSample is a metagenomic assembly obtained from the metagenome reads: SRR1182700.
value