15527.66
16S_copies
SAMN06342601
External Id
yes
GERD
University of Minnesota
INSDC center name
2017-02-19T00:00:00Z
INSDC first public
2021-04-21T08:21:49.901Z
INSDC last update
SRS1984483
INSDC secondary accession
live
INSDC status
MIMARKS.specimen.human-associated.5.0
NCBI submission package
yes
Prior_FESS
41
SNOT20_total
SRS1984483
SRA accession
yes
allergies
1
antibiotic_azithromycin
0
antibiotic_bactrim
1
antibiotic_cayston
0
antibiotic_ciprofloxacin
0
antibiotic_clindamycin
1
antibiotic_colistin
1
antibiotic_colymycin
0
antibiotic_doxycycline
0
antibiotic_gentamicin
1
antibiotic_levofloxacin
0
antibiotic_meropenem
8
antibiotic_number
Cefazolin (IV)
antibiotic_other
1
antibiotic_tobramycin
1
antibiotic_zosyn
no
asthma
2014-08-08
collection date
no sputum culture data
culture_comments
sputum expectorated from patient lung prior to FESS
description
human respiratory system
env biome
lung
http://purl.obolibrary.org/obo/UBERON_0002048
env feature
mucus
http://purl.obolibrary.org/obo/UBERON_0002306
env_material
16
fef_25_75_percent
3.89
fef_25_75_predicted
71
fef_max_percent
9.05
fef_max_predicted
3.74
fev1
83
fev1_fe6
82
fev1_fvc
49
fev1_percent
130
fif_max
4.3
fif_max_predicted
4.55
fvc
74
fvc_percent
USA: Minnesota, Minneapolis
geo loc name
Homo sapiens
http://purl.obolibrary.org/obo/NCBITaxon_9606
host
31
host age
cystic fibrosis
http://www.orpha.net/ORDO/Orphanet_586
host disease
162.56
host height
male
http://purl.obolibrary.org/obo/PATO_0000384
host sex
1005
host subject id
DF508
host_genotype1
DF508
host_genotype2
44.9740 N 93.2277 W
lat lon
0
medi_hypertonic_saline
1
medi_steroid_inhaled
0
medi_steroid_irrigation
respiratory tract metagenome
http://purl.obolibrary.org/obo/NCBITaxon_1850221
organism
2014-08-04
pft_date
yes
polypoid_change
yes
polyps
MoBio Powersoil
samp mat process
Sputocol
samp_collect_device
201601273
samp_store_loc
-80C
samp_store_temp
0.3
samp_vol_we_dna_ext
Yes
sample_purulence
yes
smoker
1
steroid_fluticasone
0
steroid_prednisone
Bacteria
http://purl.obolibrary.org/obo/NCBITaxon_2
strain
2
title