SAMN06454950
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:21:05.623Z
INSDC last update
SRS2038300
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2038300
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
97.65%
completeness_estimated
1.01%
http://purl.obolibrary.org/obo/PO_0007113
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX803754 metagenome.
description
true
environmental sample
114.88
genome coverage
UBA7118
isolate
rat gut
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
rat gut metagenome
metagenome source
true
metagenomic
Lachnoclostridium sp. UBA7118
http://purl.obolibrary.org/obo/NCBITaxon_1946700
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX803754 metagenome
subsrc_note
Uncultivated Lachnoclostridium sp. UBA7118 genome recovered from SRX803754
title
This BioSample is a metagenomic assembly obtained from the rat gut metagenome reads: SRR1702556.
value