SAMN06452870
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:16:52.313Z
INSDC last update
SRS2033982
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2033982
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
97.13%
completeness_estimated
1.71%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX498680 metagenome.
description
true
environmental sample
97.62
genome coverage
Germany: Zoo of Hamburg
geo loc name
UBA1689
isolate
Feces of three-weeks old elephant
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
gut metagenome
metagenome source
true
metagenomic
Lachnospiraceae bacterium UBA1689
http://purl.obolibrary.org/obo/NCBITaxon_1951977
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX498680 metagenome
subsrc_note
Uncultivated Lachnospiraceae bacterium UBA1689 genome recovered from SRX498680
title
This BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR1201870.
value