SAMN06455623
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2030603
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2030603
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
83.49%
completeness_estimated
3.36%
contamination_estimated
true
environmental sample
12.87
genome coverage
Pacific Ocean
geo loc name
UBA5573
isolate
hydrothermal vent
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
hydrothermal vent metagenome
metagenome source
true
metagenomic
Deltaproteobacteria bacterium UBA5573
http://purl.obolibrary.org/obo/NCBITaxon_1948551
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in ERX386639 metagenome
subsrc_note
Uncultivated Deltaproteobacteria bacterium UBA5573 genome recovered from ERX386639
title
This BioSample is a metagenomic assembly obtained from the hydrothermal vent metagenome reads: ERR420346.
value