SAMN06450407
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:14:16.870Z
INSDC last update
SRS2034371
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2034371
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
85.42%
completeness_estimated
2.50%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX621521 metagenome.
description
true
environmental sample
10.02
genome coverage
USA: Washington, DC
geo loc name
UBA4496
isolate
Biofilm grown on the Cathode of a Microbial Fuel Cell (Biofilm MCL)
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
biofilm metagenome
metagenome source
true
metagenomic
Parvularculaceae bacterium UBA4496
http://purl.obolibrary.org/obo/NCBITaxon_1953057
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX621521 metagenome
subsrc_note
Uncultivated Parvularculaceae bacterium UBA4496 genome recovered from SRX621521
title
This BioSample is a metagenomic assembly obtained from the biofilm metagenome reads: SRR1450398.
value