SAMN06453930
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:19:54.916Z
INSDC last update
SRS2036413
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2036413
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
76.45%
completeness_estimated
0.00%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX802963 metagenome.
description
true
environmental sample
59.68
genome coverage
North Sea
geo loc name
UBA7431
isolate
Subsurface seawater
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
marine metagenome
metagenome source
true
metagenomic
Roseivirga sp. UBA7431
http://purl.obolibrary.org/obo/NCBITaxon_1947391
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX802963 metagenome
subsrc_note
Uncultivated Roseivirga sp. UBA7431 genome recovered from SRX802963
title
This BioSample is a metagenomic assembly obtained from the marine metagenome reads: SRR1700446.
value