SAMN06452311
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2034610
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2034610
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
97.67%
completeness_estimated
3.15%
contamination_estimated
true
environmental sample
14.9
genome coverage
USA:New York City
geo loc name
UBA3553
isolate
wood
http://purl.obolibrary.org/obo/PO_0005352
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
terrestrial metagenome
metagenome source
true
metagenomic
Firmicutes bacterium UBA3553
http://purl.obolibrary.org/obo/NCBITaxon_1947962
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX823120 metagenome
subsrc_note
Uncultivated Firmicutes bacterium UBA3553 genome recovered from SRX823120
title
This BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749737.
value