18228.14
16S_copies
SAMN06342605
External Id
55
FEV1_Percent_Predicted
yes
GERD
University of Minnesota
INSDC center name
2017-02-19T00:00:00Z
INSDC first public
2021-04-21T08:00:46.127Z
INSDC last update
SRS1984479
INSDC secondary accession
live
INSDC status
MIMARKS.specimen.human-associated.5.0
NCBI submission package
yes
Prior_FESS
SRS1984479
SRA accession
yes
allergies
1
antibiotic_azithromycin
0
antibiotic_bactrim
0
antibiotic_cayston
1
antibiotic_ciprofloxacin
0
antibiotic_clindamycin
0
antibiotic_colistin
0
antibiotic_colymycin
1
antibiotic_doxycycline
0
antibiotic_gentamicin
0
antibiotic_levofloxacin
0
antibiotic_meropenem
4
antibiotic_number
Unasyn (IV)
antibiotic_other
0
antibiotic_tobramycin
0
antibiotic_zosyn
no
asthma
2014-11
collection date
negative
http://purl.obolibrary.org/obo/CL_0002371
culture_achromobacter_xylosoxidans
negative
http://purl.obolibrary.org/obo/CL_0002371
culture_burkholderia_cepacia
negative
http://purl.obolibrary.org/obo/CL_0002371
culture_coagulase_neg_staph
moderate growth Pseudomonas aeruginosa, strain 2
culture_comments
positive
culture_pseudomonas_aeruginosa
positive
culture_staphylococcus_aureus
mucus extracted from patient sinus during FESS
description
human respiratory system
env biome
sinus
env feature
mucus
http://purl.obolibrary.org/obo/UBERON_0002306
env_material
D
figure letter
USA: Minnesota, Minneapolis
geo loc name
Homo sapiens
http://purl.obolibrary.org/obo/NCBITaxon_9606
host
42
host age
cystic fibrosis
http://www.orpha.net/ORDO/Orphanet_586
host disease
165.1
host height
male
http://purl.obolibrary.org/obo/PATO_0000384
host sex
1021
host subject id
DF508
host_genotype1
DF508
host_genotype2
44.9740 N 93.2277 W
lat lon
0
medi_hypertonic_saline
1
medi_steroid_inhaled
1
medi_steroid_irrigation
respiratory tract metagenome
http://purl.obolibrary.org/obo/NCBITaxon_1850221
organism
0
other_culture_3_month_prior
yes
polypoid_change
yes
polyps
MoBio Powersoil
samp mat process
functional endoscopic sinus surgery
samp_collect_device
201601273
samp_store_loc
-80C
samp_store_temp
0.3
samp_vol_we_dna_ext
Yes
sample_purulence
1
sinus_culture_3_month_prior
0
sinus_culture_Achromobacter_xylosoxidans
0
sinus_culture_Haemophilus_influenzae
0
sinus_culture_Streptococcus_pneumoniae
0
sinus_culture_burkholderia_cepacia_complex
0
sinus_culture_coagulase_negative_staph
0
sinus_culture_klebsiella
1
sinus_culture_pseudomonas_aeruginossa
1
sinus_culture_staphylococcus_aureus
no
smoker
0
sputum_culture_3_month_prior
1
steroid_fluticasone
1
steroid_prednisone
Bacteria
http://purl.obolibrary.org/obo/NCBITaxon_2
strain
4
title