SAMN06454940
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:21:05.359Z
INSDC last update
SRS2032199
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2032199
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
62.75%
completeness_estimated
2.33%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX1162701 metagenome.
description
true
environmental sample
92.34
genome coverage
USA:Highgate Springs, VT
geo loc name
UBA2092
isolate
freshwater
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
freshwater metagenome
metagenome source
true
metagenomic
Planctomycetaceae bacterium UBA2092
http://purl.obolibrary.org/obo/NCBITaxon_1952730
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX1162701 metagenome
subsrc_note
Uncultivated Planctomycetaceae bacterium UBA2092 genome recovered from SRX1162701
title
This BioSample is a metagenomic assembly obtained from the freshwater metagenome reads: SRR2179954.
value