SAMN06454503
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:20:53.845Z
INSDC last update
SRS2038519
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2038519
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
91.68%
completeness_estimated
3.12%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX822108 metagenome.
description
true
environmental sample
12.73
genome coverage
USA:New York City
geo loc name
UBA6704
isolate
metal
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
terrestrial metagenome
metagenome source
true
metagenomic
Oxalobacteraceae bacterium UBA6704
http://purl.obolibrary.org/obo/NCBITaxon_1953005
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX822108 metagenome
subsrc_note
Uncultivated Oxalobacteraceae bacterium UBA6704 genome recovered from SRX822108
title
This BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1748686.
value