SAMN06454635
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2033888
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2033888
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
95.38%
completeness_estimated
0.99%
contamination_estimated
true
environmental sample
14.27
genome coverage
USA: Marcell Experimental Forest
geo loc name
UBA1162
isolate
soil
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
soil metagenome
http://purl.obolibrary.org/obo/NCBITaxon_410658
metagenome source
true
metagenomic
Dehalococcoidia bacterium UBA1162
http://purl.obolibrary.org/obo/NCBITaxon_1948472
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX461673 metagenome
subsrc_note
Uncultivated Dehalococcoidia bacterium UBA1162 genome recovered from SRX461673
title
This BioSample is a metagenomic assembly obtained from the soil metagenome reads: SRR1157607,SRR1157608.
value