SAMN06453066
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:16:57.756Z
INSDC last update
SRS2036101
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2036101
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
91.20%
completeness_estimated
0.44%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX696246 metagenome.
description
true
environmental sample
6.21
genome coverage
USA: Municipal Pensacola Beach, FL
geo loc name
UBA5337
isolate
beach sand
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
beach sand metagenome
metagenome source
true
metagenomic
Halothiobacillaceae bacterium UBA5337
http://purl.obolibrary.org/obo/NCBITaxon_1951925
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX696246 metagenome
subsrc_note
Uncultivated Halothiobacillaceae bacterium UBA5337 genome recovered from SRX696246
title
This BioSample is a metagenomic assembly obtained from the beach sand metagenome reads: SRR1569898.
value