SAMN06457037
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:03:34.695Z
INSDC last update
SRS2032129
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2032129
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
83.19%
completeness_estimated
0.91%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX1075082 metagenome.
description
true
environmental sample
4.77
genome coverage
Atlantic Ocean:Mid Cayman Rise
geo loc name
UBA1136
isolate
Beebe hydrothermal vent plume at at depth of 4900m
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
hydrothermal vent metagenome
metagenome source
true
metagenomic
Anaerolineales bacterium UBA1136
http://purl.obolibrary.org/obo/NCBITaxon_1950187
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX1075082 metagenome
subsrc_note
Uncultivated Anaerolineales bacterium UBA1136 genome recovered from SRX1075082
title
This BioSample is a metagenomic assembly obtained from the hydrothermal vent metagenome reads: SRR2080393.
value