SAMN06450710
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2033353
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2033353
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
96.83%
completeness_estimated
1.69%
contamination_estimated
true
environmental sample
62.99
genome coverage
Canada: Medicine Hat Glauconitic field
geo loc name
UBA6219
isolate
waste water
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
hydrocarbon metagenome
metagenome source
true
metagenomic
Rhodospirillaceae bacterium UBA6219
http://purl.obolibrary.org/obo/NCBITaxon_1952862
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX327522 metagenome
subsrc_note
Uncultivated Rhodospirillaceae bacterium UBA6219 genome recovered from SRX327522
title
This BioSample is a metagenomic assembly obtained from the hydrocarbon metagenome reads: SRR943321,SRR943320,SRR943319,SRR943317,SRR942928,SRR943316,SRR943318.
value