SAMN06454973
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:21:06.230Z
INSDC last update
SRS2033975
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2033975
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
95.52%
completeness_estimated
0.92%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX482087 metagenome.
description
true
environmental sample
41.85
genome coverage
UBA5071
isolate
soil
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
soil metagenome
http://purl.obolibrary.org/obo/NCBITaxon_410658
metagenome source
true
metagenomic
Methylococcaceae bacterium UBA5071
http://purl.obolibrary.org/obo/NCBITaxon_1952224
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX482087 metagenome
subsrc_note
Uncultivated Methylococcaceae bacterium UBA5071 genome recovered from SRX482087
title
This BioSample is a metagenomic assembly obtained from the soil metagenome reads: SRR1184661.
value