SAMN06455644
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2036122
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2036122
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
99.03%
completeness_estimated
0.11%
contamination_estimated
true
environmental sample
127.98
genome coverage
Spain: Alfacada pond, Ebro delta, Tarragona
geo loc name
UBA4195
isolate
epidermal mucus of Anguilla anguilla fishes in Ebro delta
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
fish metagenome
metagenome source
true
metagenomic
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX703649 metagenome
subsrc_note
Uncultivated Pseudomonas aeruginosa UBA4195 genome recovered from SRX703649
title
This BioSample is a metagenomic assembly obtained from the fish metagenome reads: SRR1578068.
value