SAMN06450397
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:14:16.607Z
INSDC last update
SRS2033788
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2033788
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
88.14%
completeness_estimated
0.00%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX392471 metagenome.
description
true
environmental sample
11.87
genome coverage
UBA5549
isolate
bioreactor
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
bioreactor metagenome
metagenome source
true
metagenomic
Synergistaceae bacterium UBA5549
http://purl.obolibrary.org/obo/NCBITaxon_1952916
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX392471 metagenome
subsrc_note
Uncultivated Synergistaceae bacterium UBA5549 genome recovered from SRX392471
title
This BioSample is a metagenomic assembly obtained from the bioreactor metagenome reads: SRR1050528.
value