SAMN06455367
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T12:58:10.504Z
INSDC last update
SRS2031977
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2031977
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
94.18%
completeness_estimated
0.57%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX1017628 metagenome.
description
true
environmental sample
66.99
genome coverage
USA: Looe Key National Marine Sanctuary, Florida
geo loc name
UBA6054
isolate
coral mucus
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
coral metagenome
metagenome source
true
metagenomic
Phycisphaerales bacterium UBA6054
http://purl.obolibrary.org/obo/NCBITaxon_1951203
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX1017628 metagenome
subsrc_note
Uncultivated Phycisphaerales bacterium UBA6054 genome recovered from SRX1017628
title
This BioSample is a metagenomic assembly obtained from the coral metagenome reads: SRR2008165.
value