SAMN06456984
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2034160
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2034160
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
80.26%
completeness_estimated
2.88%
contamination_estimated
true
environmental sample
21.44
genome coverage
Canada: Medicine Hat Glauconitic field
geo loc name
UBA6810
isolate
waste water
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
hydrocarbon metagenome
metagenome source
true
metagenomic
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX545991 metagenome
subsrc_note
Uncultivated Sulfurospirillum sp. UBA6810 genome recovered from SRX545991
title
This BioSample is a metagenomic assembly obtained from the hydrocarbon metagenome reads: SRR1290767,SRR1290771,SRR1290769,SRR1290772,SRR1290774,SRR1290764.
value