SAMN06456510
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:03:27.980Z
INSDC last update
SRS2032378
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2032378
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
87.49%
completeness_estimated
5.19%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX201528 metagenome.
description
true
environmental sample
27.29
genome coverage
UBA1844
isolate
Activated sludge form a lab-scale nitrification reactor
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
metagenome
metagenome source
true
metagenomic
Proteobacteria bacterium UBA1844
http://purl.obolibrary.org/obo/NCBITaxon_1948138
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX201528 metagenome
subsrc_note
Uncultivated Proteobacteria bacterium UBA1844 genome recovered from SRX201528
title
This BioSample is a metagenomic assembly obtained from the metagenome reads: SRR609198.
value