SAMN06455733
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2033717
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2033717
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
88.01%
completeness_estimated
0.63%
contamination_estimated
true
environmental sample
10.57
genome coverage
UBA1066
http://www.ebi.ac.uk/efo/EFO_0007874
isolate
Anaerobic Digestion Sludge
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
anaerobic digester metagenome
metagenome source
true
metagenomic
Lachnospiraceae bacterium UBA1066
http://purl.obolibrary.org/obo/NCBITaxon_1951970
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX371701 metagenome
subsrc_note
Uncultivated Lachnospiraceae bacterium UBA1066 genome recovered from SRX371701
title
This BioSample is a metagenomic assembly obtained from the anaerobic digester metagenome reads: SRR1022352.
value