SAMN06455264
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2035637
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2035637
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
70.22%
completeness_estimated
0.00%
contamination_estimated
true
environmental sample
23.14
genome coverage
China: Luzhou
geo loc name
UBA5232
isolate
mud
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
fermentation metagenome
metagenome source
true
metagenomic
Candidatus Dojkabacteria bacterium UBA5232
http://purl.obolibrary.org/obo/NCBITaxon_1953403
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX691264 metagenome
subsrc_note
Uncultivated Candidatus Dojkabacteria bacterium UBA5232 genome recovered from SRX691264
title
This BioSample is a metagenomic assembly obtained from the fermentation metagenome reads: SRR1561989.
value