SAMN06451920
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:15:40.572Z
INSDC last update
SRS2030440
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2030440
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
84.01%
completeness_estimated
0.82%
contamination_estimated
Uncultivated genome recovered from an assembly of the ERX222794 metagenome.
description
true
environmental sample
15.68
genome coverage
UBA3381
isolate
gut of vertebrate mammal
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
gut metagenome
metagenome source
true
metagenomic
Micrococcaceae bacterium UBA3381
http://purl.obolibrary.org/obo/NCBITaxon_1952256
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in ERX222794 metagenome
subsrc_note
Uncultivated Micrococcaceae bacterium UBA3381 genome recovered from ERX222794
title
This BioSample is a metagenomic assembly obtained from the gut metagenome reads: ERR248260.
value