SAMN06457673
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2034181
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2034181
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
98.33%
completeness_estimated
1.75%
contamination_estimated
true
environmental sample
18.23
genome coverage
USA: Chicago Lake Michigan
geo loc name
UBA5697
isolate
water
http://purl.obolibrary.org/obo/CHEBI_15377
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
viral metagenome
metagenome source
true
metagenomic
Bacteroidetes bacterium UBA5697
http://purl.obolibrary.org/obo/NCBITaxon_1953163
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX553227 metagenome
subsrc_note
Uncultivated Bacteroidetes bacterium UBA5697 genome recovered from SRX553227
title
This BioSample is a metagenomic assembly obtained from the viral metagenome reads: SRR1302010.
value