SAMN06455079
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:21:09.047Z
INSDC last update
SRS2030750
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2030750
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
90.38%
completeness_estimated
1.18%
contamination_estimated
Uncultivated genome recovered from an assembly of the ERX552263 metagenome.
description
true
environmental sample
15.18
genome coverage
UBA7304
isolate
saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
marine metagenome
metagenome source
true
metagenomic
Pseudomonadaceae bacterium UBA7304
http://purl.obolibrary.org/obo/NCBITaxon_1952792
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in ERX552263 metagenome
subsrc_note
Uncultivated Pseudomonadaceae bacterium UBA7304 genome recovered from ERX552263
title
This BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR594346.
value