SAMN06456503
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2032435
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2032435
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
81.79%
completeness_estimated
4.03%
http://purl.obolibrary.org/obo/CHEBI_16236
contamination_estimated
true
environmental sample
123.57
genome coverage
Canada: Northern Alberta
geo loc name
UBA5740
isolate
waste water
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
hydrocarbon metagenome
metagenome source
true
metagenomic
Prolixibacteraceae bacterium UBA5740
http://purl.obolibrary.org/obo/NCBITaxon_1952947
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX210886 metagenome
subsrc_note
Uncultivated Prolixibacteraceae bacterium UBA5740 genome recovered from SRX210886
title
This BioSample is a metagenomic assembly obtained from the hydrocarbon metagenome reads: SRR636559.
value