SAMN06298441
External Id
Univerisity of Wisconsin-Madison
INSDC center name
2017-02-05T00:00:00Z
INSDC first public
2017-02-17T11:16:16.860Z
INSDC last update
SRS1990130
INSDC secondary accession
live
INSDC status
Plant
NCBI submission model
Plant.1.0
NCBI submission package
SRS1990130
SRA accession
3 weeks old grown in 8-hour short days
age
This study was done in order to explore the specificity of a rapid flowering mutant in Brachypodium distachyon named REPRESSOR OF VERNALIZATION1 (RVR1) which involved in establishing a vernalization requirement. We were interested to compare the non-vernalized rvr1 transcriptome with that of vernalized wild type plants. In order to obtain vernalized and non-vernalized plants that were developmentally matched, the vernalized sampled were vernalized as imbibed seed in soil in 8hour short days. At the end of the cold treatment, non-vernalized samples were planted and all samples were grown to the third leaf stage in 8 hour short days and the fully expaned third leaf was harvested in the middle of the photoperiod.
description
third leaf stage, newly emerged third leaf was harvested
dev stage
Bd21-3
ecotype
Bd21-3 and rvr1
genotype
Iraq: N33.760883, E44.40375
geo loc name
Brachypodium distachyon
http://purl.obolibrary.org/obo/NCBITaxon_15368
organism
21C
temp
newly emerged third leaf
tissue
Brachypodium distachyon (Bd21-3) and rvr1 transcriptome
title