SAMN06455114
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:21:09.982Z
INSDC last update
SRS2031296
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2031296
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
96.42%
completeness_estimated
0.23%
contamination_estimated
Uncultivated genome recovered from an assembly of the ERX555988 metagenome.
description
true
environmental sample
42.27
genome coverage
UBA5688
isolate
saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
marine metagenome
metagenome source
true
metagenomic
Akkermansiaceae bacterium UBA5688
http://purl.obolibrary.org/obo/NCBITaxon_1951365
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in ERX555988 metagenome
subsrc_note
Uncultivated Akkermansiaceae bacterium UBA5688 genome recovered from ERX555988
title
This BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR599050.
value