SAMN06454043
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2033540
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2033540
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
71.27%
completeness_estimated
1.10%
contamination_estimated
true
environmental sample
9.71
genome coverage
USA: Wyoming
geo loc name
UBA2741
isolate
Rumen fluid
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
gut metagenome
metagenome source
true
metagenomic
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX331733 metagenome
subsrc_note
Uncultivated Porphyromonadaceae bacterium UBA2741 genome recovered from SRX331733
title
This BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR948119.
value