SAMN06455316
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:22:06.818Z
INSDC last update
SRS2033896
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2033896
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
88.39%
completeness_estimated
0.65%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX461727 metagenome.
description
true
environmental sample
9.82
genome coverage
USA: Marcell Experimental Forest
geo loc name
UBA7544
isolate
soil
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
soil metagenome
http://purl.obolibrary.org/obo/NCBITaxon_410658
metagenome source
true
metagenomic
Syntrophaceae bacterium UBA7544
http://purl.obolibrary.org/obo/NCBITaxon_1961457
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX461727 metagenome
subsrc_note
Uncultivated Syntrophaceae bacterium UBA7544 genome recovered from SRX461727
title
This BioSample is a metagenomic assembly obtained from the soil metagenome reads: SRR1157609.
value