SAMN06454501
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:20:53.794Z
INSDC last update
SRS2032334
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2032334
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
76.40%
completeness_estimated
3.40%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX147846 metagenome.
description
true
environmental sample
14.55
genome coverage
UBA7479
isolate
guineaPig6
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
Cavia porcellus metagenome
metagenome source
true
metagenomic
Porphyromonadaceae bacterium UBA7479
http://purl.obolibrary.org/obo/NCBITaxon_1952690
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX147846 metagenome
subsrc_note
Uncultivated Porphyromonadaceae bacterium UBA7479 genome recovered from SRX147846
title
This BioSample is a metagenomic assembly obtained from the Cavia porcellus metagenome reads: SRR496701.
value