SAMN06453756
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:19:50.168Z
INSDC last update
SRS2032981
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2032981
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
59.30%
completeness_estimated
0.00%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX290711 metagenome.
description
true
environmental sample
100
genome coverage
UBA3679
isolate
low methane producing sheep
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
gut metagenome
metagenome source
true
metagenomic
Bacteroidales bacterium UBA3679
http://purl.obolibrary.org/obo/NCBITaxon_1950497
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX290711 metagenome
subsrc_note
Uncultivated Bacteroidales bacterium UBA3679 genome recovered from SRX290711
title
This BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR873601.
value