SAMN06456918
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2032131
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2032131
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
90.96%
completeness_estimated
5.82%
contamination_estimated
true
environmental sample
30.46
genome coverage
Atlantic Ocean:Mid Cayman Rise
geo loc name
UBA1138
isolate
Beebe hydrothermal vent plume at at depth of 4900m
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
hydrothermal vent metagenome
metagenome source
true
metagenomic
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX1075082 metagenome
subsrc_note
Uncultivated Gemmatimonadales bacterium UBA1138 genome recovered from SRX1075082
title
This BioSample is a metagenomic assembly obtained from the hydrothermal vent metagenome reads: SRR2080393.
value