SAMN06456060
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2035949
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2035949
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
89.41%
completeness_estimated
2.54%
contamination_estimated
true
environmental sample
42.71
genome coverage
China: Chengdu
geo loc name
UBA5435
isolate
mud
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
fermentation metagenome
metagenome source
true
metagenomic
Firmicutes bacterium UBA5435
http://purl.obolibrary.org/obo/NCBITaxon_1948058
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX691281 metagenome
subsrc_note
Uncultivated Firmicutes bacterium UBA5435 genome recovered from SRX691281
title
This BioSample is a metagenomic assembly obtained from the fermentation metagenome reads: SRR1562006.
value