SAMN06455900
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2035545
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2035545
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
77.53%
completeness_estimated
1.12%
contamination_estimated
true
environmental sample
134.42
genome coverage
USA: Crystal Geyser near Green River, Utah
geo loc name
UBA1545
isolate
water
http://purl.obolibrary.org/obo/CHEBI_15377
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
groundwater metagenome
metagenome source
true
metagenomic
Patescibacteria group bacterium UBA1545
http://purl.obolibrary.org/obo/NCBITaxon_1948779
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX667739 metagenome
subsrc_note
Uncultivated Patescibacteria group bacterium UBA1545 genome recovered from SRX667739
title
This BioSample is a metagenomic assembly obtained from the groundwater metagenome reads: SRR1534154.
value