SAMN06454151
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:20:00.832Z
INSDC last update
SRS2034644
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2034644
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
67.87%
completeness_estimated
0.97%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX823157 metagenome.
description
true
environmental sample
20.28
genome coverage
USA:New York City
geo loc name
UBA7635
isolate
metal/plastic
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
terrestrial metagenome
metagenome source
true
metagenomic
Brevundimonas sp. UBA7635
http://purl.obolibrary.org/obo/NCBITaxon_1946140
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX823157 metagenome
subsrc_note
Uncultivated Brevundimonas sp. UBA7635 genome recovered from SRX823157
title
This BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749774.
value