SAMN06452242
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:15:49.235Z
INSDC last update
SRS2038463
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2038463
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
89.90%
completeness_estimated
1.30%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX806416 metagenome.
description
true
environmental sample
23.63
genome coverage
Singapore
geo loc name
UBA5703
isolate
sediments
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
sediment metagenome
metagenome source
true
metagenomic
Micavibrio sp. UBA5703
http://purl.obolibrary.org/obo/NCBITaxon_1946926
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX806416 metagenome
subsrc_note
Uncultivated Micavibrio sp. UBA5703 genome recovered from SRX806416
title
This BioSample is a metagenomic assembly obtained from the sediment metagenome reads: SRR1706179.
value