SAMN06450977
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2034077
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2034077
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
71.84%
completeness_estimated
0.48%
contamination_estimated
true
environmental sample
72.64
genome coverage
Germany: Zoo of Hamburg
geo loc name
UBA1729
isolate
Feces of six-years-old elephant
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
gut metagenome
metagenome source
true
metagenomic
Lachnospiraceae bacterium UBA1729
http://purl.obolibrary.org/obo/NCBITaxon_1951981
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX498681 metagenome
subsrc_note
Uncultivated Lachnospiraceae bacterium UBA1729 genome recovered from SRX498681
title
This BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR1221442.
value