SAMN06455696
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T12:58:19.153Z
INSDC last update
SRS2030574
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2030574
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
72.92%
completeness_estimated
1.37%
contamination_estimated
Uncultivated genome recovered from an assembly of the ERX288947 metagenome.
description
true
environmental sample
8.83
genome coverage
UBA1853
isolate
Tara Oceans DNA samples corresponding to size fractions for protist
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
marine metagenome
metagenome source
true
metagenomic
Gammaproteobacteria bacterium UBA1853
http://purl.obolibrary.org/obo/NCBITaxon_1948586
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in ERX288947 metagenome
subsrc_note
Uncultivated Gammaproteobacteria bacterium UBA1853 genome recovered from ERX288947
title
This BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR315802.
value