SAMN06450399
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2033918
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2033918
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
72.53%
completeness_estimated
2.96%
contamination_estimated
true
environmental sample
6.19
genome coverage
Hong Kong
http://identifiers.org/medgen/C4017271
geo loc name
UBA5543
isolate
water
http://purl.obolibrary.org/obo/CHEBI_15377
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
wastewater metagenome
metagenome source
true
metagenomic
Bacteroidetes bacterium UBA5543
http://purl.obolibrary.org/obo/NCBITaxon_1953162
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX472115 metagenome
subsrc_note
Uncultivated Bacteroidetes bacterium UBA5543 genome recovered from SRX472115
title
This BioSample is a metagenomic assembly obtained from the wastewater metagenome reads: SRR1171178.
value