SAMN06455826
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T12:58:22.656Z
INSDC last update
SRS2030649
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2030649
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
75.56%
completeness_estimated
1.28%
contamination_estimated
Uncultivated genome recovered from an assembly of the ERX552243 metagenome.
description
true
environmental sample
18.87
genome coverage
UBA831
isolate
saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
marine metagenome
metagenome source
true
metagenomic
Candidatus Microthrix sp. UBA831
http://purl.obolibrary.org/obo/NCBITaxon_1946220
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in ERX552243 metagenome
subsrc_note
Uncultivated Candidatus Microthrix sp. UBA831 genome recovered from ERX552243
title
This BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR594304.
value