SAMN06454966
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:21:06.045Z
INSDC last update
SRS2031002
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2031002
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
97.03%
completeness_estimated
3.62%
contamination_estimated
Uncultivated genome recovered from an assembly of the ERX552334 metagenome.
description
true
environmental sample
23.21
genome coverage
UBA5078
isolate
saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
marine metagenome
metagenome source
true
metagenomic
Gammaproteobacteria bacterium UBA5078
http://purl.obolibrary.org/obo/NCBITaxon_1948627
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in ERX552334 metagenome
subsrc_note
Uncultivated Gammaproteobacteria bacterium UBA5078 genome recovered from ERX552334
title
This BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR594377.
value