SAMN06452655
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:16:46.443Z
INSDC last update
SRS2032856
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2032856
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
91.53%
completeness_estimated
0.00%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX290707 metagenome.
description
true
environmental sample
116.67
genome coverage
UBA4299
isolate
low methane producing sheep
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
gut metagenome
metagenome source
true
metagenomic
Atopobiaceae bacterium UBA4299
http://purl.obolibrary.org/obo/NCBITaxon_1951457
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX290707 metagenome
subsrc_note
Uncultivated Atopobiaceae bacterium UBA4299 genome recovered from SRX290707
title
This BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR873597.
value