SAMN06450410
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:14:16.950Z
INSDC last update
SRS2034374
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2034374
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
92.73%
completeness_estimated
2.11%
http://purl.obolibrary.org/obo/CHEBI_16236
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX621521 metagenome.
description
true
environmental sample
11.72
genome coverage
USA: Washington, DC
geo loc name
UBA4495
isolate
Biofilm grown on the Cathode of a Microbial Fuel Cell (Biofilm MCL)
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
biofilm metagenome
metagenome source
true
metagenomic
Cellvibrionales bacterium UBA4495
http://purl.obolibrary.org/obo/NCBITaxon_1950794
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX621521 metagenome
subsrc_note
Uncultivated Cellvibrionales bacterium UBA4495 genome recovered from SRX621521
title
This BioSample is a metagenomic assembly obtained from the biofilm metagenome reads: SRR1450398.
value