SAMN06454029
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2035514
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2035514
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
92.86%
completeness_estimated
1.75%
contamination_estimated
true
environmental sample
48.24
genome coverage
Pacific Ocean
geo loc name
UBA3961
isolate
rock
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
subsurface metagenome
metagenome source
true
metagenomic
Chitinophagaceae bacterium UBA3961
http://purl.obolibrary.org/obo/NCBITaxon_1951555
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX869326 metagenome
subsrc_note
Uncultivated Chitinophagaceae bacterium UBA3961 genome recovered from SRX869326
title
This BioSample is a metagenomic assembly obtained from the subsurface metagenome reads: SRR1793930.
value