SAMN06456522
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:03:28.312Z
INSDC last update
SRS2034220
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2034220
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
66.62%
completeness_estimated
1.49%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX559898 metagenome.
description
true
environmental sample
160.31
genome coverage
Canada: Northern Alberta
geo loc name
UBA2276
isolate
biofilm
http://purl.obolibrary.org/obo/BTO_0002690
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
hydrocarbon metagenome
metagenome source
true
metagenomic
Desulfobulbaceae bacterium UBA2276
http://purl.obolibrary.org/obo/NCBITaxon_1961548
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX559898 metagenome
subsrc_note
Uncultivated Desulfobulbaceae bacterium UBA2276 genome recovered from SRX559898
title
This BioSample is a metagenomic assembly obtained from the hydrocarbon metagenome reads: SRR1313259,SRR1313257,SRR1313264,SRR1313260,SRR1313258,SRR1313261.
value