SAMN06457796
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:04:40.710Z
INSDC last update
SRS2034256
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2034256
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
74.69%
completeness_estimated
0.16%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX559902 metagenome.
description
true
environmental sample
15.17
genome coverage
Canada: Fort McMurray, Alberta
geo loc name
UBA5209
isolate
biofilm
http://purl.obolibrary.org/obo/BTO_0002690
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
hydrocarbon metagenome
metagenome source
true
metagenomic
Candidatus Dojkabacteria bacterium UBA5209
http://purl.obolibrary.org/obo/NCBITaxon_1953401
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX559902 metagenome
subsrc_note
Uncultivated Candidatus Dojkabacteria bacterium UBA5209 genome recovered from SRX559902
title
This BioSample is a metagenomic assembly obtained from the hydrocarbon metagenome reads: SRR1313269,SRR1313278,SRR1313272,SRR1313274,SRR1313275,SRR1313277.
value