2775.78
16S_copies
SAMN06342618
External Id
no
GERD
University of Minnesota
INSDC center name
2017-02-19T00:00:00Z
INSDC first public
2021-04-21T08:21:50.220Z
INSDC last update
SRS1984466
INSDC secondary accession
live
INSDC status
MIMARKS.specimen.human-associated.5.0
NCBI submission package
yes
Prior_FESS
36
SNOT20_total
SRS1984466
SRA accession
no
allergies
0
antibiotic_azithromycin
0
antibiotic_bactrim
0
antibiotic_cayston
0
antibiotic_ciprofloxacin
0
antibiotic_clindamycin
0
antibiotic_colistin
0
antibiotic_colymycin
0
antibiotic_doxycycline
0
antibiotic_gentamicin
0
antibiotic_levofloxacin
0
antibiotic_meropenem
0
antibiotic_number
0
antibiotic_tobramycin
0
antibiotic_zosyn
no
asthma
2015-12-14
collection date
no sputum culture data
culture_comments
sputum expectorated from patient lung prior to FESS
description
human respiratory system
env biome
lung
http://purl.obolibrary.org/obo/UBERON_0002048
env feature
mucus
http://purl.obolibrary.org/obo/UBERON_0002306
env_material
90
fef_max_percent
6.87
fef_max_predicted
1.83
fev1
84
fev1_fe6
83
fev1_fvc
61
fev1_percent
3.41
fif_max_predicted
3.62
fvc
72
fvc_percent
USA: Minnesota, Minneapolis
geo loc name
Homo sapiens
http://purl.obolibrary.org/obo/NCBITaxon_9606
host
34
host age
cystic fibrosis
http://www.orpha.net/ORDO/Orphanet_586
host disease
160
host height
female
http://purl.obolibrary.org/obo/PATO_0000383
host sex
1158
host subject id
DF508
host_genotype1
DF508
host_genotype2
44.9740 N 93.2277 W
lat lon
0
medi_hypertonic_saline
0
medi_steroid_inhaled
0
medi_steroid_irrigation
respiratory tract metagenome
http://purl.obolibrary.org/obo/NCBITaxon_1850221
organism
2015-12-08
pft_date
no
polypoid_change
no
polyps
MoBio Powersoil
samp mat process
Sputocol
samp_collect_device
201601273
samp_store_loc
-80C
samp_store_temp
0.3
samp_vol_we_dna_ext
Yes
sample_purulence
no
smoker
0
steroid_fluticasone
0
steroid_prednisone
Bacteria
http://purl.obolibrary.org/obo/NCBITaxon_2
strain
11
title