SAMN06450429
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:14:17.452Z
INSDC last update
SRS2032047
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2032047
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
77.97%
completeness_estimated
4.60%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX1050744 metagenome.
description
true
environmental sample
22.38
genome coverage
Baltic Sea
geo loc name
UBA2545
isolate
water
http://purl.obolibrary.org/obo/CHEBI_15377
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
marine metagenome
metagenome source
true
metagenomic
Proteobacteria bacterium UBA2545
http://purl.obolibrary.org/obo/NCBITaxon_1948153
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX1050744 metagenome
subsrc_note
Uncultivated Proteobacteria bacterium UBA2545 genome recovered from SRX1050744
title
This BioSample is a metagenomic assembly obtained from the marine metagenome reads: SRR2053276.
value