SAMN06454290
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2031440
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2031440
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
62.93%
completeness_estimated
1.19%
contamination_estimated
true
environmental sample
26
genome coverage
UBA2588
isolate
saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
marine metagenome
metagenome source
true
metagenomic
Dehalococcoidia bacterium UBA2588
http://purl.obolibrary.org/obo/NCBITaxon_1948485
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in ERX556040 metagenome
subsrc_note
Uncultivated Dehalococcoidia bacterium UBA2588 genome recovered from ERX556040
title
This BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR598986.
value