SAMN06457013
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:03:34.029Z
INSDC last update
SRS2034735
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2034735
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
97.52%
completeness_estimated
0.00%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX823223 metagenome.
description
true
environmental sample
66.7
genome coverage
USA:New York City
geo loc name
UBA7490
isolate
wood
http://purl.obolibrary.org/obo/PO_0005352
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
terrestrial metagenome
metagenome source
true
metagenomic
Janibacter sp. UBA7490
http://purl.obolibrary.org/obo/NCBITaxon_1946652
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX823223 metagenome
subsrc_note
Uncultivated Janibacter sp. UBA7490 genome recovered from SRX823223
title
This BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749837.
value