SAMN06457635
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:04:36.343Z
INSDC last update
SRS2035205
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2035205
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
85.62%
completeness_estimated
1.55%
http://purl.obolibrary.org/obo/CHEBI_16236
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX834642 metagenome.
description
true
environmental sample
11.28
genome coverage
Kenya
geo loc name
UBA7596
isolate
feces
http://purl.obolibrary.org/obo/NCIT_C13234
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
gut metagenome
metagenome source
true
metagenomic
Verrucomicrobia bacterium UBA7596
http://purl.obolibrary.org/obo/NCBITaxon_1948294
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX834642 metagenome
subsrc_note
Uncultivated Verrucomicrobia bacterium UBA7596 genome recovered from SRX834642
title
This BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR1747041.
value