SAMN06452900
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:16:53.144Z
INSDC last update
SRS2035171
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2035171
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
72.27%
completeness_estimated
2.25%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX834636 metagenome.
description
true
environmental sample
9
genome coverage
Kenya
geo loc name
UBA6888
isolate
feces
http://purl.obolibrary.org/obo/NCIT_C13234
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
gut metagenome
metagenome source
true
metagenomic
Verrucomicrobia bacterium UBA6888
http://purl.obolibrary.org/obo/NCBITaxon_1948287
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX834636 metagenome
subsrc_note
Uncultivated Verrucomicrobia bacterium UBA6888 genome recovered from SRX834636
title
This BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR1747035.
value