SAMN06452154
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2038843
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2038843
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
86.31%
completeness_estimated
4.55%
contamination_estimated
true
environmental sample
19.63
genome coverage
USA:New York City
geo loc name
UBA2058
isolate
metal
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
terrestrial metagenome
metagenome source
true
metagenomic
Firmicutes bacterium UBA2058
http://purl.obolibrary.org/obo/NCBITaxon_1947944
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX822397 metagenome
subsrc_note
Uncultivated Firmicutes bacterium UBA2058 genome recovered from SRX822397
title
This BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749014.
value