SAMN06454432
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2032259
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2032259
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
95.21%
completeness_estimated
0.38%
contamination_estimated
true
environmental sample
17.15
genome coverage
USA: Angelo, CA
geo loc name
UBA7618
isolate
Angelo meadow plot 1, 20cm depth, 2 days after second rain event (91mm)
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
soil metagenome
http://purl.obolibrary.org/obo/NCBITaxon_410658
metagenome source
true
metagenomic
Delftia acidovorans
http://purl.obolibrary.org/obo/NCBITaxon_80866
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX1299767 metagenome
subsrc_note
Uncultivated Delftia acidovorans UBA7618 genome recovered from SRX1299767
title
This BioSample is a metagenomic assembly obtained from the soil metagenome reads: SRR2546424.
value