SAMN06456975
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:03:32.982Z
INSDC last update
SRS2032724
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2032724
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
98.13%
completeness_estimated
2.44%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX272783 metagenome.
description
true
environmental sample
65.6
genome coverage
Germany: Hamburg-Reitbrook
geo loc name
UBA7672
isolate
water
http://purl.obolibrary.org/obo/CHEBI_15377
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
biofilm metagenome
metagenome source
true
metagenomic
Hyphomonadaceae bacterium UBA7672
http://purl.obolibrary.org/obo/NCBITaxon_1951957
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX272783 metagenome
subsrc_note
Uncultivated Hyphomonadaceae bacterium UBA7672 genome recovered from SRX272783
title
This BioSample is a metagenomic assembly obtained from the biofilm metagenome reads: SRR845265.
value