SAMN06456330
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:03:22.878Z
INSDC last update
SRS2032583
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2032583
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
85.30%
completeness_estimated
0.73%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX211003 metagenome.
description
true
environmental sample
46.54
genome coverage
Canada: Alberta
geo loc name
UBA4094
isolate
coal bed cutting
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
hydrocarbon metagenome
metagenome source
true
metagenomic
Opitutaceae bacterium UBA4094
http://purl.obolibrary.org/obo/NCBITaxon_1952999
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX211003 metagenome
subsrc_note
Uncultivated Opitutaceae bacterium UBA4094 genome recovered from SRX211003
title
This BioSample is a metagenomic assembly obtained from the hydrocarbon metagenome reads: SRR636581.
value