SAMN06453966
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:19:55.876Z
INSDC last update
SRS2033747
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2033747
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
81.14%
completeness_estimated
1.95%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX392460 metagenome.
description
true
environmental sample
7.59
genome coverage
UBA5829
isolate
bioreactor
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
bioreactor metagenome
metagenome source
true
metagenomic
Armatimonadetes bacterium UBA5829
http://purl.obolibrary.org/obo/NCBITaxon_1953135
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX392460 metagenome
subsrc_note
Uncultivated Armatimonadetes bacterium UBA5829 genome recovered from SRX392460
title
This BioSample is a metagenomic assembly obtained from the bioreactor metagenome reads: SRR1050519.
value