SAMN06450446
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:14:17.902Z
INSDC last update
SRS2038371
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2038371
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
60.34%
completeness_estimated
0.00%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX803756 metagenome.
description
true
environmental sample
606.2
genome coverage
UBA7140
isolate
rat gut
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
rat gut metagenome
metagenome source
true
metagenomic
Prevotella sp. UBA7140
http://purl.obolibrary.org/obo/NCBITaxon_1947205
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX803756 metagenome
subsrc_note
Uncultivated Prevotella sp. UBA7140 genome recovered from SRX803756
title
This BioSample is a metagenomic assembly obtained from the rat gut metagenome reads: SRR1702558.
value