SAMN06452652
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:16:46.358Z
INSDC last update
SRS2034206
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2034206
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
95.95%
completeness_estimated
0.71%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX559894 metagenome.
description
true
environmental sample
821.98
genome coverage
Canada:Athabasca Oil Sands
geo loc name
UBA2239
isolate
waste water
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
hydrocarbon metagenome
metagenome source
true
metagenomic
Gallionellaceae bacterium UBA2239
http://purl.obolibrary.org/obo/NCBITaxon_1953084
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX559894 metagenome
subsrc_note
Uncultivated Sulfuricellaceae bacterium UBA2239 genome recovered from SRX559894
title
This BioSample is a metagenomic assembly obtained from the hydrocarbon metagenome reads: SRR1313242,SRR1313243.
value