SAMN06455230
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2031114
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2031114
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
95.12%
completeness_estimated
3.05%
contamination_estimated
true
environmental sample
28.63
genome coverage
UBA1966
isolate
saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
marine metagenome
metagenome source
true
metagenomic
Proteobacteria bacterium UBA1966
http://purl.obolibrary.org/obo/NCBITaxon_1948141
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in ERX555914 metagenome
subsrc_note
Uncultivated Proteobacteria bacterium UBA1966 genome recovered from ERX555914
title
This BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR598993.
value