SAMN06454421
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:20:51.708Z
INSDC last update
SRS2030435
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2030435
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
90.14%
completeness_estimated
2.15%
http://purl.obolibrary.org/obo/CHEBI_16236
contamination_estimated
Uncultivated genome recovered from an assembly of the ERX222794 metagenome.
description
true
environmental sample
23.81
genome coverage
UBA3376
isolate
gut of vertebrate mammal
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
gut metagenome
metagenome source
true
metagenomic
Flavobacteriales bacterium UBA3376
http://purl.obolibrary.org/obo/NCBITaxon_1950991
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in ERX222794 metagenome
subsrc_note
Uncultivated Flavobacteriales bacterium UBA3376 genome recovered from ERX222794
title
This BioSample is a metagenomic assembly obtained from the gut metagenome reads: ERR248260.
value