SAMN06450937
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:14:31.195Z
INSDC last update
SRS2033679
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2033679
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
96.16%
completeness_estimated
2.17%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX331753 metagenome.
description
true
environmental sample
18.66
genome coverage
USA: Wyoming
geo loc name
UBA7272
isolate
Rumen fluid
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
gut metagenome
metagenome source
true
metagenomic
Lachnospiraceae bacterium UBA7272
http://purl.obolibrary.org/obo/NCBITaxon_1952162
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX331753 metagenome
subsrc_note
Uncultivated Lachnospiraceae bacterium UBA7272 genome recovered from SRX331753
title
This BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR948137.
value