SAMN06454245
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:20:03.448Z
INSDC last update
SRS2032423
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2032423
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
84.46%
completeness_estimated
1.08%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX210886 metagenome.
description
true
environmental sample
9.67
genome coverage
Canada: Northern Alberta
geo loc name
UBA5776
isolate
waste water
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
hydrocarbon metagenome
metagenome source
true
metagenomic
Candidatus Omnitrophica bacterium UBA5776
http://purl.obolibrary.org/obo/NCBITaxon_1953266
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX210886 metagenome
subsrc_note
Uncultivated Candidatus Omnitrophica bacterium UBA5776 genome recovered from SRX210886
title
This BioSample is a metagenomic assembly obtained from the hydrocarbon metagenome reads: SRR636559.
value