SAMN06456177
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T12:58:32.160Z
INSDC last update
SRS2030538
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2030538
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
56.94%
completeness_estimated
0.00%
contamination_estimated
Uncultivated genome recovered from an assembly of the ERX250271 metagenome.
description
true
environmental sample
34.9
genome coverage
Malaysia
geo loc name
UBA1388
isolate
closed biodigester
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
palm oil mill effluent metagenome
metagenome source
true
metagenomic
Patescibacteria group bacterium UBA1388
http://purl.obolibrary.org/obo/NCBITaxon_1948771
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in ERX250271 metagenome
subsrc_note
Uncultivated Patescibacteria group bacterium UBA1388 genome recovered from ERX250271
title
This BioSample is a metagenomic assembly obtained from the palm oil mill effluent metagenome reads: ERR276848.
value