SAMN06455049
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:21:08.251Z
INSDC last update
SRS2033804
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2033804
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
94.81%
completeness_estimated
0.54%
http://purl.obolibrary.org/obo/CHEBI_34648
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX393041 metagenome.
description
true
environmental sample
8.79
genome coverage
Australia: Brisbane, Thorneside Wastewater Treatment Plant
geo loc name
UBA2798
isolate
activated sludge
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
EBPR bioreactor metagenome
metagenome source
true
metagenomic
Flavobacteriales bacterium UBA2798
http://purl.obolibrary.org/obo/NCBITaxon_1950983
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX393041 metagenome
subsrc_note
Uncultivated Flavobacteriales bacterium UBA2798 genome recovered from SRX393041
title
This BioSample is a metagenomic assembly obtained from the EBPR bioreactor metagenome reads: SRR1051195.
value