SAMN06455189
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:21:11.989Z
INSDC last update
SRS2032971
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2032971
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
63.01%
completeness_estimated
0.86%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX290711 metagenome.
description
true
environmental sample
19.15
genome coverage
UBA3702
isolate
low methane producing sheep
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
gut metagenome
metagenome source
true
metagenomic
Prevotellaceae bacterium UBA3702
http://purl.obolibrary.org/obo/NCBITaxon_1952484
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX290711 metagenome
subsrc_note
Uncultivated Prevotellaceae bacterium UBA3702 genome recovered from SRX290711
title
This BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR873601.
value