SAMN06451153
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:14:37.032Z
INSDC last update
SRS2032620
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2032620
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
76.63%
completeness_estimated
2.46%
http://purl.obolibrary.org/obo/CHEBI_16236
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX211342 metagenome.
description
true
environmental sample
51.7
genome coverage
Canada: Syncrude, Ft. McMurray, Alberta
geo loc name
UBA5610
isolate
waste water
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
hydrocarbon metagenome
metagenome source
true
metagenomic
Pelobacter sp. UBA5610
http://purl.obolibrary.org/obo/NCBITaxon_1961379
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX211342 metagenome
subsrc_note
Uncultivated Pelobacter sp. UBA5610 genome recovered from SRX211342
title
This BioSample is a metagenomic assembly obtained from the hydrocarbon metagenome reads: SRR636569.
value