SAMN06454650
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:20:57.663Z
INSDC last update
SRS2036001
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2036001
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
81.22%
completeness_estimated
2.35%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX691282 metagenome.
description
true
environmental sample
14.41
genome coverage
China: Chengdu
geo loc name
UBA5392
isolate
mud
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
fermentation metagenome
metagenome source
true
metagenomic
Clostridiales bacterium UBA5392
http://purl.obolibrary.org/obo/NCBITaxon_1950897
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX691282 metagenome
subsrc_note
Uncultivated Clostridiales bacterium UBA5392 genome recovered from SRX691282
title
This BioSample is a metagenomic assembly obtained from the fermentation metagenome reads: SRR1562007.
value