SAMN06453388
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:19:40.497Z
INSDC last update
SRS2030790
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2030790
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
82.72%
completeness_estimated
1.28%
contamination_estimated
Uncultivated genome recovered from an assembly of the ERX552276 metagenome.
description
true
environmental sample
28.59
genome coverage
UBA6618
isolate
saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
marine metagenome
metagenome source
true
metagenomic
Candidatus Microthrix sp. UBA6618
http://purl.obolibrary.org/obo/NCBITaxon_1946195
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in ERX552276 metagenome
subsrc_note
Uncultivated Candidatus Microthrix sp. UBA6618 genome recovered from ERX552276
title
This BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR594323.
value