SAMN06457283
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:03:41.543Z
INSDC last update
SRS2034672
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2034672
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
100.00%
completeness_estimated
0.00%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX823184 metagenome.
description
true
environmental sample
11.72
genome coverage
USA:New York City
geo loc name
UBA6745
isolate
metal
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
terrestrial metagenome
metagenome source
true
metagenomic
Empedobacter sp. UBA6745
http://purl.obolibrary.org/obo/NCBITaxon_1946447
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX823184 metagenome
subsrc_note
Uncultivated Empedobacter sp. UBA6745 genome recovered from SRX823184
title
This BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749801.
value