SAMN06456450
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:03:26.175Z
INSDC last update
SRS2032596
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2032596
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
86.80%
completeness_estimated
0.99%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX211342 metagenome.
description
true
environmental sample
24.27
genome coverage
Canada: Syncrude, Ft. McMurray, Alberta
geo loc name
UBA5620
isolate
waste water
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
hydrocarbon metagenome
metagenome source
true
metagenomic
Dehalococcoidia bacterium UBA5620
http://purl.obolibrary.org/obo/NCBITaxon_1948504
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX211342 metagenome
subsrc_note
Uncultivated Dehalococcoidia bacterium UBA5620 genome recovered from SRX211342
title
This BioSample is a metagenomic assembly obtained from the hydrocarbon metagenome reads: SRR636569.
value