SAMN06454579
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:20:55.816Z
INSDC last update
SRS2033668
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2033668
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
76.47%
completeness_estimated
0.29%
http://purl.obolibrary.org/obo/CHEBI_34648
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX331752 metagenome.
description
true
environmental sample
135.06
genome coverage
USA: Wyoming
geo loc name
UBA7281
isolate
Rumen fluid
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
gut metagenome
metagenome source
true
metagenomic
Succinatimonas sp. UBA7281
http://purl.obolibrary.org/obo/NCBITaxon_1947577
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX331752 metagenome
subsrc_note
Uncultivated Succinatimonas sp. UBA7281 genome recovered from SRX331752
title
This BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR948136.
value