SAMN06454899
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2031871
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2031871
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
53.61%
completeness_estimated
0.00%
contamination_estimated
true
environmental sample
13.63
genome coverage
UBA3058
isolate
Switch grass fiber attached community in cow rumen, 72 hour post incubation
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
bovine gut metagenome
metagenome source
true
metagenomic
Bacteroidales bacterium UBA3058
http://purl.obolibrary.org/obo/NCBITaxon_1950475
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX034809 metagenome
subsrc_note
Uncultivated Bacteroidales bacterium UBA3058 genome recovered from SRX034809
title
This BioSample is a metagenomic assembly obtained from the bovine gut metagenome reads: SRR094166,SRR094417,SRR094403,SRR094415,SRR094418,SRR094416,SRR094405.
value