SAMN06455242
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2031937
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2031937
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
79.10%
completeness_estimated
0.78%
contamination_estimated
true
environmental sample
19.09
genome coverage
UBA1246
isolate
Switch grass fiber attached community in cow rumen, 72 hour post incubation
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
bovine gut metagenome
metagenome source
true
metagenomic
Clostridiales bacterium UBA1246
http://purl.obolibrary.org/obo/NCBITaxon_1950812
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX035182 metagenome
subsrc_note
Uncultivated Clostridiales bacterium UBA1246 genome recovered from SRX035182
title
This BioSample is a metagenomic assembly obtained from the bovine gut metagenome reads: SRR094926,SRR094429,SRR094437.
value