SAMN06453847
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:19:52.565Z
INSDC last update
SRS2035708
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2035708
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
63.87%
completeness_estimated
0.00%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX691267 metagenome.
description
true
environmental sample
7.91
genome coverage
China: Luzhou
geo loc name
UBA5303
isolate
mud
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
fermentation metagenome
metagenome source
true
metagenomic
Atopobiaceae bacterium UBA5303
http://purl.obolibrary.org/obo/NCBITaxon_1951466
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX691267 metagenome
subsrc_note
Uncultivated Atopobiaceae bacterium UBA5303 genome recovered from SRX691267
title
This BioSample is a metagenomic assembly obtained from the fermentation metagenome reads: SRR1561992.
value