SAMN06456203
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
SRS2032607
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2032607
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
93.73%
completeness_estimated
1.35%
contamination_estimated
true
environmental sample
154.98
genome coverage
Canada: Syncrude, Ft. McMurray, Alberta
geo loc name
UBA5602
isolate
waste water
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
hydrocarbon metagenome
metagenome source
true
metagenomic
Rhodocyclaceae bacterium UBA5602
http://purl.obolibrary.org/obo/NCBITaxon_1952845
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX211342 metagenome
subsrc_note
Uncultivated Rhodocyclaceae bacterium UBA5602 genome recovered from SRX211342
title
This BioSample is a metagenomic assembly obtained from the hydrocarbon metagenome reads: SRR636569.
value