SAMN06451800
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:15:37.389Z
INSDC last update
SRS2033556
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2033556
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
92.99%
completeness_estimated
0.54%
http://purl.obolibrary.org/obo/CHEBI_34648
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX331738 metagenome.
description
true
environmental sample
31.29
genome coverage
USA: Wyoming
geo loc name
UBA2714
isolate
Rumen fluid
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
gut metagenome
metagenome source
true
metagenomic
Bacteroidales bacterium UBA2714
http://purl.obolibrary.org/obo/NCBITaxon_1950449
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX331738 metagenome
subsrc_note
Uncultivated Bacteroidales bacterium UBA2714 genome recovered from SRX331738
title
This BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR948122.
value