SAMN06450385
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:14:16.290Z
INSDC last update
SRS2035350
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2035350
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
89.58%
completeness_estimated
0.00%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX834662 metagenome.
description
true
environmental sample
28.74
genome coverage
Kenya
geo loc name
UBA4634
isolate
feces
http://purl.obolibrary.org/obo/NCIT_C13234
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
gut metagenome
metagenome source
true
metagenomic
Spirochaetales bacterium UBA4634
http://purl.obolibrary.org/obo/NCBITaxon_1951268
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX834662 metagenome
subsrc_note
Uncultivated Spirochaetales bacterium UBA4634 genome recovered from SRX834662
title
This BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR1747061.
value