SAMN06452903
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:16:53.227Z
INSDC last update
SRS2035175
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2035175
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
90.73%
completeness_estimated
0.45%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX834636 metagenome.
description
true
environmental sample
23.04
genome coverage
Kenya
geo loc name
UBA6881
isolate
feces
http://purl.obolibrary.org/obo/NCIT_C13234
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
gut metagenome
metagenome source
true
metagenomic
Bifidobacterium sp. UBA6881
http://purl.obolibrary.org/obo/NCBITaxon_1946109
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX834636 metagenome
subsrc_note
Uncultivated Bifidobacterium sp. UBA6881 genome recovered from SRX834636
title
This BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR1747035.
value