SAMN06451342
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:15:25.294Z
INSDC last update
SRS2032925
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2032925
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
64.66%
completeness_estimated
0.00%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX290709 metagenome.
description
true
environmental sample
33.46
genome coverage
UBA4376
isolate
low methane producing sheep
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
gut metagenome
metagenome source
true
metagenomic
Prevotella sp. UBA4376
http://purl.obolibrary.org/obo/NCBITaxon_1947163
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX290709 metagenome
subsrc_note
Uncultivated Prevotella sp. UBA4376 genome recovered from SRX290709
title
This BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR873599.
value