SAMN06452205
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:15:48.238Z
INSDC last update
SRS2032346
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2032346
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
70.00%
completeness_estimated
0.00%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX147847 metagenome.
description
true
environmental sample
10.26
genome coverage
UBA7484
isolate
guineaPig7
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
Cavia porcellus metagenome
metagenome source
true
metagenomic
Porphyromonadaceae bacterium UBA7484
http://purl.obolibrary.org/obo/NCBITaxon_1952692
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX147847 metagenome
subsrc_note
Uncultivated Porphyromonadaceae bacterium UBA7484 genome recovered from SRX147847
title
This BioSample is a metagenomic assembly obtained from the Cavia porcellus metagenome reads: SRR496702.
value