SAMN06298077
External Id
Walter Reed Army Institute of Research
INSDC center name
2017-07-11T12:37:29.530Z
INSDC first public
2017-07-11T12:37:29.530Z
INSDC last update
SRS1958187
INSDC secondary accession
live
INSDC status
Pathogen.cl
NCBI submission model
Pathogen.cl.1.0
NCBI submission package
SRS1958187
SRA accession
MHRP
collected by
2009
collection date
11
days since first positive nucleic-acid testing
Targeted deep sequencing of HIV-1 VPR (HXB2 coordinates: 5485-5676) amplified by nested PCR from plasma sample obtained 11 days since first positive nucleic-acid testing from participant RV217_40061
description
Thailand
geo loc name
Homo sapiens
http://purl.obolibrary.org/obo/NCBITaxon_9606
host
HIV infection
http://www.ebi.ac.uk/efo/EFO_0000764
host disease
female
http://purl.obolibrary.org/obo/PATO_0000383
host sex
CRF01_AE
isolate
blood plasma
http://purl.obolibrary.org/obo/UBERON_0001969
isolation source
12.9276 N 100.8771 E
lat lon
Human immunodeficiency virus 1
http://purl.obolibrary.org/obo/NCBITaxon_11676
organism
VPR
subgenomic region
RV217_40061_day11_VPR
title