SAMN06453212
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2017-08-15T13:17:01.844Z
INSDC last update
SRS2036236
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS2036236
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
89.74%
completeness_estimated
0.85%
contamination_estimated
Uncultivated genome recovered from an assembly of the SRX731627 metagenome.
description
true
environmental sample
60.9
genome coverage
Luxembourg: Schifflange
geo loc name
UBA4126
isolate
water
http://purl.obolibrary.org/obo/CHEBI_15377
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
wastewater metagenome
metagenome source
true
metagenomic
Candidatus Microthrix parvicella
http://purl.obolibrary.org/obo/NCBITaxon_41950
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in SRX731627 metagenome
subsrc_note
Uncultivated Candidatus Microthrix parvicella UBA4126 genome recovered from SRX731627
title
This BioSample is a metagenomic assembly obtained from the wastewater metagenome reads: SRR1611149.
value