SAMN10335474
External Id
University of Auckland
INSDC center name
2018-10-28T00:00:00Z
INSDC first public
2018-10-30T12:29:14.059Z
INSDC last update
SRS3986822
INSDC secondary accession
live
INSDC status
Metagenome or environmental
NCBI submission model
Metagenome.environmental.1.0
NCBI submission package
SRS3986822
SRA accession
2014
collection date
Pairs of swab samples were taken under endoscopic guidance from the middle meatus. PCR amplification of the ITS2 genomic region (ITS3-ITS4) was conducted for the left and right middle meatuses separately.
description
New Zealand: Auckland
geo loc name
Homo sapiens (sinonasal)
isolation source
36.85 S 174.76 E
lat lon
human nasopharyngeal metagenome
http://purl.obolibrary.org/obo/NCBITaxon_1131769
organism
Fixed in RNAlater and frozen at -20 degrees celcius until DNA extraction (Qiagen DNA/RNA AllPrep kit), and PCR amplification of the ITS2 genomic region (ITS3-ITS4).
samp mat process
Swab
http://purl.obolibrary.org/obo/NCIT_C17627
samp_collect_device
Pair of swabs from the middle meatus
samp_size
271_Right_middle_meatus_swab_sample
sample info
Metagenome or environmental sample from human nasopharyngeal metagenome
title
271R_Fungi
unique sample id