SAMN10134664
External Id
NCGR
INSDC center name
2019-05-20T00:00:00Z
INSDC first public
2019-05-20T11:11:02.281Z
INSDC last update
live
INSDC status
Plant
NCBI submission model
Plant.1.0
NCBI submission package
The genome sequence of G. raimondii was one of the first genomes of cotton to be sequenced (Paterson et al. 2012, Nature). It contains the D-genome (diploid), a close relative to the DT-genome found in polyploid cultivated cotton. Here, we created a de novo genome assembly of a different strain of G. raimondii using PacBio, HiC, and Bionano. It was used to correct a few errors in the initial, published Sanger sequence as well as provide a genome for comparative genomics (i.e. fewer gaps).
description
mature plant
dev stage
Peru
geo loc name
D5-4
isolate
Gossypium raimondii
http://purl.obolibrary.org/obo/NCBITaxon_29730
organism
leaf
http://purl.obolibrary.org/obo/PO_0025034
tissue
Plant sample from Gossypium raimondii
title