SAMN10160077
External Id
UC Davis
INSDC center name
2019-11-01T00:50:36.243Z
INSDC first public
2019-11-01T00:50:36.243Z
INSDC last update
live
INSDC status
MIGS.ba
NCBI submission model
MIGS/MIMS/MIMARKS.plant-associated
NCBI submission model
MIGS.ba.plant-associated.5.0
NCBI submission package
2014
collection date
Draft genome sequences of four Methylobacterium isolates were obtained. These strains were isolated by undergraduates in MIC105L, a Microbial Diversity laboratory course at the University of California, Davis in 2014. Three of the strains (Methylobacterium extorquens strains EC, ME1, and ME2) were directly isolated from leaves on minimal medium containing methanol as the sole carbon source. Methylobacterium populi strain PINKEL was isolated from compost by selective enrichment on caffeine as the sole carbon source. The genome sequences continue to be mined each year by subsequent MIC105L classes.
description
terrestrial plant leaf
env biome
Arboretum
env feature
leaf
http://purl.obolibrary.org/obo/PO_0025034
env_material
USA: California
geo loc name
plant
http://purl.obolibrary.org/obo/UBERON_0000468
host
Minimal media with methanol
isol_growth_condt
leaf
http://purl.obolibrary.org/obo/PO_0025034
isolation-source
38.5449 N 121.7405 W
lat lon
1
num_replicons
Methylorubrum extorquens
http://purl.obolibrary.org/obo/NCBITaxon_408
organism
ME2
http://www.ebi.ac.uk/efo/EFO_0006645
strain
MIGS Cultured Bacterial/Archaeal sample from Methylorubrum extorquens
title