SAMN10225287
External Id
SUSTech
INSDC center name
2018-10-09T00:00:00Z
INSDC first public
2018-10-10T03:37:17.383Z
INSDC last update
SRS3895816
INSDC secondary accession
live
INSDC status
Model organism or animal
NCBI submission model
Model.organism.animal.1.0
NCBI submission package
SRS3895816
SRA accession
2 weeks
http://purl.obolibrary.org/obo/UO_0000034
age
Nipponbare
http://www.ebi.ac.uk/efo/EFO_0007587
cultivar
Enhancer by STARR seq from Oryza sativa Japonica
description
The rice cultivar Nipponbare seeds were placed on filter papers moistened with water in Petri dishes at room temperature to promote germination(3days) and were then transferred to culture box at 37 degree centigrade for about 24h. and then transplant into the box with soil. The rice plants were grown in a growth room at 28 degree centigrade with a 12/12 h light/dark pthotoperiod and illuminated by a bank of 400 W metal halide lamps, a light internsity at plant height of 400 umol m-2 s-1 and a relative humidity of approximately 60%. Two-week-old rice seedlings were collected for the experiments.
growth_protocol
Oryza sativa Japonica Group
http://purl.obolibrary.org/obo/NCBITaxon_39947
organism
neuter
sex
Seedling
http://purl.obolibrary.org/obo/PO_0007131
tissue
Nipponbare STARR-seq biological replicate 2
title
We isolated the protoplasts following a published protocol with minor modifications. Green tissues from the stem of 80-120 rice seedlings were used.
treatment