SAMN14402989
External Id
Universite du littoral de la cote d'Opale
INSDC center name
2020-05-14T00:50:21.170Z
INSDC first public
2020-05-14T00:50:21.170Z
INSDC last update
SRS6339221
INSDC secondary accession
live
INSDC status
Metagenome or environmental
NCBI submission model
Metagenome.environmental.1.0
NCBI submission package
SRS6339221
SRA accession
2018
collection date
DNA extraction were done from seawater or biofilms samples. The 16S rRNA genes were sequenced by targeting the V4-V5 variable region using an Illumina MiSeq platform. Totally, 5 runs were realized in paired-end sequencing (2x300pb).
design description
12EFa_S37_L001_R1_001.fastq
filename
12EFa_S37_L001_R2_001.fastq
filename2
fastq
filetype
France
geo loc name
Illumina MiSeq
instrument model
seawater
isolation source
12CWa
library id
paired
library layout
PCR
library selection
METAGENOMIC
library source
AMPLICON
library strategy
seawater metagenome
http://purl.obolibrary.org/obo/NCBITaxon_1561972
organism
ILLUMINA
platform
Sequencing of 16S rRNA gene from seawater or biofilm samples: cold seawater inlet at week 12
title
Metagenome or environmental sample from seawater metagenome
title