SAMN14342210
External Id
G10K
INSDC center name
2020-03-10T00:00:00Z
INSDC first public
2021-02-28T09:03:48.600Z
INSDC last update
live
INSDC status
Model organism or animal
NCBI submission model
Model.organism.animal.1.0
NCBI submission package
35 days
age
15 Apr 2019
birth date
University of Arkansas
birth location
Broiler mother/White Leghorn layer father
breed
Nick Anthony
collected by
2019-05-20
collection date
20 May 2019
death_date
The chicken has been the most studied bird. It serves as a model organism for basic and biomedical science, and is one of the most commonly consumed food sources for humans. This trio of samples was collected to create a high-quality reference genome for two haplotypes. The female offspring (bGalGal1) is a cross between a broiler breeder female (bGalGal2) and White Leghorn male (bGalGal3). Breeding and sample collection was conducted by Nick Anthony at the University of Arkansas, in coordination with Wesly Warren, Ron Okimoto, Hans Cheng, and Rachel Hawken. Blood from these samples were used to create high-quality reference genome assemblies of each haplotype, coordinated by Erich Jarvis, Wesley Warren, and Olivier Fedrigo, at the Rockefeller University Vertebrate Genome Lab, as part of the Vertebrate Genomes Project (VGP). The data from these BioSamples are currently under a G10K-VGP publication embargo until removed from this description, following the G10K data use policy at the following URL: https://genome10k.soe.ucsc.edu/about/data_use_policy.
description
juvenile
http://purl.obolibrary.org/obo/UBERON_0000112
dev stage
USA: Fayetteville, Arkansas
geo loc name
bGalGal1
isolate
36.0822 N 94.1719 W
lat lon
Gallus gallus
http://purl.obolibrary.org/obo/NCBITaxon_9031
organism
female
http://purl.obolibrary.org/obo/PATO_0000383
sex
blood, brain, ovaries, chest muscle, liver, kidney
tissue
Animal sample from Gallus gallus
title
fresh frozen
treatment