SAMN14402884
External Id
Universite du littoral de la cote d'Opale
INSDC center name
2020-05-14T00:50:19.857Z
INSDC first public
2020-05-14T00:50:19.857Z
INSDC last update
SRS6338986
INSDC secondary accession
live
INSDC status
Metagenome or environmental
NCBI submission model
Metagenome.environmental.1.0
NCBI submission package
SRS6338986
SRA accession
2018
collection date
DNA extraction were done from seawater or biofilms samples. The 16S rRNA genes were sequenced by targeting the V4-V5 variable region using an Illumina MiSeq platform. Totally, 5 runs were realized in paired-end sequencing (2x300pb).
design description
10E2a_S28_L001_R1_001.fastq
filename
10E2a_S28_L001_R2_001.fastq
filename2
fastq
filetype
France
geo loc name
Illumina MiSeq
instrument model
seawater
isolation source
10W2a
library id
paired
library layout
PCR
library selection
METAGENOMIC
library source
AMPLICON
library strategy
seawater metagenome
http://purl.obolibrary.org/obo/NCBITaxon_1561972
organism
ILLUMINA
platform
Sequencing of 16S rRNA gene from seawater or biofilm samples: seawater of tank 2 at week 10
title
Metagenome or environmental sample from seawater metagenome
title