SAMN14403143
External Id
Universite du littoral de la cote d'Opale
INSDC center name
2020-05-14T00:50:23.827Z
INSDC first public
2020-05-14T00:50:23.827Z
INSDC last update
SRS6339003
INSDC secondary accession
live
INSDC status
Metagenome or environmental
NCBI submission model
Metagenome.environmental.1.0
NCBI submission package
SRS6339003
SRA accession
2018
collection date
DNA extraction were done from seawater or biofilms samples. The 16S rRNA genes were sequenced by targeting the V4-V5 variable region using an Illumina MiSeq platform. Totally, 5 runs were realized in paired-end sequencing (2x300pb).
design description
30B3b_S95_L001_R1_001.fastq
filename
30B3b_S95_L001_R2_001.fastq
filename2
fastq
filetype
France
geo loc name
Illumina MiSeq
instrument model
biofilm
http://purl.obolibrary.org/obo/BTO_0002690
isolation source
30B3b
library id
paired
library layout
PCR
library selection
METAGENOMIC
library source
AMPLICON
library strategy
biofilm metagenome
http://purl.obolibrary.org/obo/NCBITaxon_718308
organism
ILLUMINA
platform
Sequencing of 16S rRNA gene from seawater or biofilm samples: biofilm from tank 3 at week 30
title
Metagenome or environmental sample from biofilm metagenome
title