Other Race
,host_race
SARS-CoV-2/Human/USA/FL-CDC-STM-000049471/2021
External Id
SAMN18958438
External Id
CDC-OAMD
INSDC center name
2021-05-15T00:50:10.817Z
INSDC first public
2021-05-15T00:50:10.817Z
INSDC last update
SRS8825432
INSDC secondary accession
live
INSDC status
SARS-CoV-2: clinical or host-associated
NCBI submission model
SARS-CoV-2.cl.1.0
NCBI submission package
SRS8825432
SRA accession
Helix
http://purl.obolibrary.org/obo/HP_0000396
collected by
2021-04-02
collection date
Swabs
http://purl.obolibrary.org/obo/NCIT_C17627
collection method
Swabs
http://purl.obolibrary.org/obo/NCIT_C17627
collection_device
n gene
diagnostic_gene_name_2
orf1ab
diagnostic_gene_name_3
25.9385890960693
diagnostic_pcr_Ct_value_2
26.8283443450928
diagnostic_pcr_Ct_value_3
ThermoFisher Taqpath Assay
diagnostic_pcr_protocol_2
ThermoFisher Taqpath Assay
diagnostic_pcr_protocol_3
USA: Florida
geo loc name
Homo sapiens
http://purl.obolibrary.org/obo/NCBITaxon_9606
host
19
host age
COVID-19
http://purl.obolibrary.org/obo/MONDO_0100096
host disease
female
http://purl.obolibrary.org/obo/PATO_0000383
host sex
Nasal
host_anatomical_part
SARS-CoV-2/Human/USA/FL-CDC-STM-000049471/2021
isolate
nasal
isolation source
B.1.1.7
lineage/clade name
Severe acute respiratory syndrome coronavirus 2
http://purl.obolibrary.org/obo/NCBITaxon_2697049
organism
SARS-CoV-2 Genome sequencing and assembly - HELIX
title