SAMN18762525
External Id
University of Minnesota
INSDC center name
2021-08-23T00:00:00Z
INSDC first public
2021-08-23T11:13:02.194Z
INSDC last update
SRS8715069
INSDC secondary accession
live
INSDC status
MIGS.eu
NCBI submission model
MIGS/MIMS/MIMARKS.plant-associated
NCBI submission model
MIGS.eu.plant-associated.5.0
NCBI submission package
SRS8715069
SRA accession
2014-12-01
collection date
A. cochlioides vegetative mycelium were propagated for RNA extraction. Mycelium from A. cochlioides isolate 103-1 was grown in 100 mL of 1/8th strength PDB (potato dextrose broth) in 250 mL Erlenmeyer flasks, and collected for RNA extraction with the RNeasy Mini Kit for Plants (Qiagen Inc., Valencia, CA, USA) for Illumina sequencing.
description
temperate biome
env_broad_scale
agricultural field
http://purl.obolibrary.org/obo/ENVO_00000114
env_local_scale
agricultural soil
env_medium
USA: Minnesota
geo loc name
Beta vulgaris
http://purl.obolibrary.org/obo/NCBITaxon_161934
host
Soil baiting
isol_growth_condt
103-1
isolate
46.26 N 96.58 W
lat lon
Aphanomyces cochlioides
http://purl.obolibrary.org/obo/NCBITaxon_112091
organism
MIGS Eukaryotic sample from Aphanomyces cochlioides
title