SAMN18923748
External Id
CanCOGeN: Canadian Public Health Laboratory SARS-CoV-2 submission group
INSDC center name
2021-04-29T00:00:00Z
INSDC first public
2021-04-29T13:01:14.315Z
INSDC last update
live
INSDC status
Pathogen.cl
NCBI submission model
Pathogen.cl.1.0
NCBI submission package
Nasopharynx (NP)
anatomical_part
Erie Shores HealthCare Leamington Site
collected by
2020-11-24
collection date
Swab
http://purl.obolibrary.org/obo/NCIT_C17627
collection_device
20.15
diagnostic_rt_qpcr_ct_value_1
E gene (orf4)
gene_name_1
Canada: Ontario
geo loc name
Homo sapiens
http://purl.obolibrary.org/obo/NCBITaxon_9606
host
COVID-19
http://purl.obolibrary.org/obo/MONDO_0100096
host disease
SARS-CoV-2/human/CAN/ON-LHSC23/2020
isolate
Nasopharynx (NP): Swab
isolation source
Not Provided
lat lon
Severe acute respiratory syndrome coronavirus 2
http://purl.obolibrary.org/obo/NCBITaxon_2697049
organism
Diagnostic testing
purpose_of_sampling
Surveillance testing
purpose_of_sequencing
McMaster University
sequenced_by
mcarthua@mcmaster.ca
submitter_contact_email
Pathogen: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2
title