White
http://purl.obolibrary.org/obo/HANCESTRO_0005
,host_race
SAMN18957854
External Id
SARS-CoV-2/Human/USA/FL-CDC-STM-000026122/2021
External Id
CDC-OAMD
INSDC center name
2021-05-15T00:50:32.523Z
INSDC first public
2021-05-15T00:50:32.523Z
INSDC last update
SRS8818217
INSDC secondary accession
live
INSDC status
SARS-CoV-2: clinical or host-associated
NCBI submission model
SARS-CoV-2.cl.1.0
NCBI submission package
SRS8818217
SRA accession
Helix
http://purl.obolibrary.org/obo/HP_0000396
collected by
2021-02-27
collection date
Swabs
http://purl.obolibrary.org/obo/NCIT_C17627
collection method
Swabs
http://purl.obolibrary.org/obo/NCIT_C17627
collection_device
ms2
diagnostic_gene_name_1
n gene
diagnostic_gene_name_2
orf1ab
diagnostic_gene_name_3
s gene
diagnostic_gene_name_4
29.187042236
diagnostic_pcr_Ct_value_1
19.382936478
diagnostic_pcr_Ct_value_2
20.001142502
diagnostic_pcr_Ct_value_3
19.971509933
diagnostic_pcr_Ct_value_4
ThermoFisher Taqpath Assay
diagnostic_pcr_protocol_1
ThermoFisher Taqpath Assay
diagnostic_pcr_protocol_2
ThermoFisher Taqpath Assay
diagnostic_pcr_protocol_3
ThermoFisher Taqpath Assay
diagnostic_pcr_protocol_4
USA: Florida
geo loc name
Homo sapiens
http://purl.obolibrary.org/obo/NCBITaxon_9606
host
68
host age
COVID-19
http://purl.obolibrary.org/obo/MONDO_0100096
host disease
female
http://purl.obolibrary.org/obo/PATO_0000383
host sex
Nasal
host_anatomical_part
SARS-CoV-2/Human/USA/FL-CDC-STM-000026122/2021
isolate
nasal
isolation source
B.1.2
lineage/clade name
Severe acute respiratory syndrome coronavirus 2
http://purl.obolibrary.org/obo/NCBITaxon_2697049
organism
SARS-CoV-2 Genome sequencing and assembly - HELIX
title