SAMN19245042
External Id
Stanford University
INSDC center name
2022-04-04T00:50:16.030Z
INSDC first public
2022-04-04T00:50:16.030Z
INSDC last update
SRS9013372
INSDC secondary accession
live
INSDC status
Model organism or animal
NCBI submission model
Model.organism.animal.1.0
NCBI submission package
SRS9013372
SRA accession
Michael F. Clarke, Stanford University, CA, USA
biomaterial provider
mammary tumor
cell type
Linda J. van Weele
collected by
breast cancer
http://www.ebi.ac.uk/efo/EFO_0000305
disease
relapse tumor
disease_stage
Krt14-Cre mT/mG Trp53f/f MMTV-rtTA TetO-KrasG12D
genotype
All mice used for this study were maintained at the Stanford Animal Facility in accordance with the guidelines of the animal care use committee.
growth_protocol
WES03
http://purl.obolibrary.org/obo/NCBITaxon_11623
labID_sample_number
Mus musculus
http://purl.obolibrary.org/obo/NCBITaxon_10090
organism
tissue sample
sample type
female
http://purl.obolibrary.org/obo/PATO_0000383
sex
FACS-sorted tumor cells were pelleted and stored at -80 °C until digestion.
store_cond
C57BL/6
strain
mammary tumor
tissue
mouse1_RT1
title
To obtain sufficient DNA for WES, whole genome amplification was done using the REPLI-g mini kit (Catalog# 150023, Qiagen), according to manufacturer’s instructions.
treatment