SAMN29146374
External Id
The University of Iowa
INSDC center name
2022-06-16T00:00:00Z
INSDC first public
2022-06-16T14:07:16.583Z
INSDC last update
SRS13424383
INSDC secondary accession
live
INSDC status
MIGS/MIMS/MIMARKS.human-associated
NCBI submission model
MIGS.ba
NCBI submission model
MIGS.ba.human-associated.5.0
NCBI submission package
SRS13424383
SRA accession
Not collected
collection_date
Generating a comprehensive inventory of factors important for T3SS gene expression in Pseudomonas aeruginosa strain PAK. Transposon insertion libraries harboring T3SS fluorescent reporter were cultured under inducing conditions for T3SS gene expression and individual cells were sorted into T3SS-Off and T3SS-On populations on FACS. NexGen sequencing of the transposon insertion sites and comparison of the T3SS-Off and T3SS-On populations identified genes and small noncoding RNAs that playing a role in T3SS gene expression.
description
Not collected
env_broad_scale
Not collected
env_local_scale
Not collected
env_medium
Not collected
geo_loc_name
Homo sapiens
host
Not collected
isol_growth_condt
Not collected
lat_lon
Not collected
num_replicons
Pseudomonas aeruginosa PAK
http://purl.obolibrary.org/obo/NCBITaxon_1009714
organism
Not collected
ref_biomaterial
PAK
strain
Pseudomonas aeruginosa T3SS screen
title