SAMN29220776
External Id
USP
INSDC center name
2022-06-23T00:00:00Z
INSDC first public
2022-06-23T09:01:04.833Z
INSDC last update
live
INSDC status
MIMAG.soil
NCBI submission model
MIMAG.soil.5.0
NCBI submission package
2014-01
collection_date
0-20 cm
depth
The draft genome of the Fischerella sp. CENA71 presents a GC content of around 40 percent and length of 7.46 Mb, distributed across 95 scaffolds. Phylogenetic and phylogenomic analyses have shown that CENA71 belongs to a clade of rare Fischerella strains, more closely related to genera such as Hapalosiphon, Mastigocladus, and Westiellopsis than to the core Fischerella strains. Moreover, the secondary structure of the 16S and 23S ITS of CENA71 has shown significant differences when compared to other Fischerella strains. Bioinformatics analysis linking known peptidic metabolites to the CENA71 biosynthetic genes indicated the presence of spumigins. CRISPR-Cas analysis detected 15 CRISPR arrays and Cas enzymes characteristic of Type I and III systems.
description
48.20 m
elev
soil cyanobiome
env_broad_scale
rainforest
env_local_scale
rainforest soil
env_medium
Brazil: Amazon rainforest
geo_loc_name
CENA71
isolate
Soil from Hatahara archaeological site
isolation_source
3.1629 S 60.1216 W
lat_lon
Fischerella sp. CENA71
http://purl.obolibrary.org/obo/NCBITaxon_2653668
organism
Metagenome-assembled genome of Fischerella sp. CENA71 from non-axenic cyanobacterium culture
title