SAMN29151208
External Id
NJ DOH PHEL wastewater submission group
INSDC center name
2022-06-16T00:00:00Z
INSDC first public
2022-06-16T14:36:04.389Z
INSDC last update
live
INSDC status
SARS-CoV-2: wastewater surveillance
NCBI submission model
SARS-CoV-2.wwsurv.1.0
NCBI submission package
New Jersey State Department of Health
collected_by
2022-05-12
collection_date
NJDOH-1
collection_site_id
09:32:00
collection_time
1 L
collection_volume
ceres nanotrap
concentration_method
Murine norovirus
extraction_control
qiagen allprep powerviral dna/rna kit
extraction_method
USA: New Jersey
geo_loc_name
wastewater
isolation_source
wastewater metagenome
http://purl.obolibrary.org/obo/NCBITaxon_527639
organism
GenomeTrakr; LFFM ww project
project_name
public health surveillance community-level
purpose_of_ww_sampling
detection of target by RT PCR or ddPCR
purpose_of_ww_sequencing
New Jersey State Department of Health
sequenced_by
technical replicate
specimen_processing
SARS-CoV-2: wastewater surveillance sample from Wastewater metagenome
title
crassphage
ww_endog_control_1
18.977
ww_endog_control_1_conc
RT-qPCR Detection of crAssphage from Wastewater using AB 7500
ww_endog_control_1_protocol
cycles (Ct value)
ww_endog_control_1_units
26.95
ww_flow
7.26
ww_ph
275,000
ww_population
population of jurisdiction encompassing the wastewater service area
ww_population_source
24
ww_sample_duration
raw wastewater
ww_sample_matrix
wastewater treatment plant
ww_sample_site
composite
ww_sample_type
SARS-CoV-2
ww_surv_target_1
0
ww_surv_target_1_conc
cycles (Ct value)
ww_surv_target_1_conc_unit
N gene (N1)
ww_surv_target_1_gene
no
ww_surv_target_1_known_present
RT-qPCR Detection of SARS-CoV-2 from Wastewater Using the AB 7500 (protocols.io)
ww_surv_target_1_protocol
SARS-CoV-2
ww_surv_target_2
0
ww_surv_target_2_conc
cycles (Ct value)
ww_surv_target_2_conc_unit
N gene (N2)
ww_surv_target_2_gene
no
ww_surv_target_2_known_present
9.8
ww_temperature
258
ww_total_suspended_solids