SAMN29135744
External Id
OH ADDL submission group
INSDC center name
2022-06-16T00:00:00Z
INSDC first public
2022-06-16T09:41:04.290Z
INSDC last update
live
INSDC status
SARS-CoV-2: wastewater surveillance
NCBI submission model
SARS-CoV-2.wwsurv.1.0
NCBI submission package
Ohio State Department of Agriculture
collected_by
2022-06-08
collection_date
2PB0013*JD
collection_site_id
1L
collection_volume
innovaprep ultrafiltration
concentration_method
Bovine Coronavirus Modified Live Vaccine
extraction_control
qiagen allprep powerviral dna/rna kit
extraction_method
USA: Ohio
geo_loc_name
wastewater
isolation_source
wastewater metagenome
http://purl.obolibrary.org/obo/NCBITaxon_527639
organism
GenomeTrakr; LFFM ww project
project_name
public health surveillance community-level
purpose_of_ww_sampling
detection of target by RT PCR or ddPCR
purpose_of_ww_sequencing
Ohio State Department of Agriculture
sequenced_by
technical replicate
specimen_processing
SARS-CoV-2: wastewater surveillance sample from wastewater metagenome
title
Pepper Mild Mottle Virus
ww_endog_control_1
4773750
ww_endog_control_1_conc
GT-Digital SARS-CoV-2 Wastewater Surveillance Assay For QIAcuity dPCR
ww_endog_control_1_protocol
copies/L wastewater
ww_endog_control_1_units
2312886.6
ww_flow
7.3
ww_ph
4800
ww_population
GT-Digital SARS-CoV-2 Wastewater Surveillance Assay For QIAcuity dPCR
ww_processing_protocol
24
ww_sample_duration
raw wastewater
ww_sample_matrix
wastewater treatment plant
ww_sample_site
composite
ww_sample_type
SARS-CoV-2
ww_surv_target_1
4864
ww_surv_target_1_conc
copies/L wastewater
ww_surv_target_1_conc_unit
N gene (N2)
ww_surv_target_1_gene
no
ww_surv_target_1_known_present
GT-Digital SARS-CoV-2 Wastewater Surveillance Assay For QIAcuity dPCR
ww_surv_target_1_protocol
SARS-CoV-2
ww_surv_target_2
6802
ww_surv_target_2_conc
copies/L wastewater
ww_surv_target_2_conc_unit
N gene (N1)
ww_surv_target_2_gene
no
ww_surv_target_2_known_present
Not Reported
ww_temperature