SARS-CoV-2/Human/USA/CA-CDC-LC0691269/2022
External Id
SAMN29159577
External Id
CDC-OAMD
INSDC center name
2022-06-17T00:00:00Z
INSDC first public
2022-06-17T19:21:22.320Z
INSDC last update
SRS13478807
INSDC secondary accession
live
INSDC status
SARS-CoV-2/Human/USA/CA-CDC-LC0691269/2022
Isolate
SARS-CoV-2: clinical or host-associated
NCBI submission model
SARS-CoV-2.cl.1.0
NCBI submission package
SRS13478807
SRA accession
Laboratory Corporation of America
collected_by
2022-05-27
collection_date
Nasal Swabs
collection_device
Nasal Swabs
collection_method
N1 gene
diagnostic_gene_name_1
N2 gene
diagnostic_gene_name_2
RP gene
diagnostic_gene_name_3
21.329
diagnostic_pcr_Ct_value_1
19.537
diagnostic_pcr_Ct_value_2
30.093
diagnostic_pcr_Ct_value_3
Labcorp LDT
diagnostic_pcr_protocol_1
Labcorp LDT
diagnostic_pcr_protocol_2
Labcorp LDT
diagnostic_pcr_protocol_3
USA: California
geo_loc_name
Homo sapiens
host
33
host_age
COVID-19
host_disease
Unknown
host_race
female
host_sex
Nasal Swabs
isolation_source
BA.2.12.1
lineage/clade name
Severe acute respiratory syndrome coronavirus 2
http://purl.obolibrary.org/obo/NCBITaxon_2697049
organism
baseline surveillance (random sampling)
purpose_of_sequencing
CDC Sars CoV2 Sequencing Baseline Constellation
title