Metagenome or environmental
BioSampleModel
2022-04-14
ENA-FIRST-PUBLIC
2022-04-14
ENA-LAST-UPDATE
SAMN27569615
External Id
pda|gabyslysa21
INSDC center alias
pda|gabyslysa21
INSDC center name
2022-04-14T01:16:53Z
INSDC first public
2022-04-14T01:16:53Z
INSDC last update
public
INSDC status
SRS12601461
SRA accession
14_XS
Submitter Id
NCBI
broker name
2017-07-31
collection_date
Sequencing of the V3-V4 region of the bacterial 16S rRNA gene was performed using the barcoded primer set 515f/806r and 5 l of DNA. DNA was extracted and purified using MagAttrack Power Soil DNA KF kit.
design_description
14_S15_L001_R1_001 (paired) trimmed (paired, trimmed pairs).R1.fastq
filename
14_S15_L001_R2_001 (paired) trimmed (paired, trimmed pairs).R2.fastq
filename2
fastq
filetype
USA: Los Angeles
geo_loc_name
Homo sapiens
host
Illumina MiSeq
instrument_model
Duodenum
isolation_source
34.0752 N 118.3802 W
lat_lon
14
library_id
paired
library_layout
PCR
library_selection
METAGENOMIC
library_source
AMPLICON
library_strategy
human gut metagenome
http://purl.obolibrary.org/obo/NCBITaxon_408170
organism
ILLUMINA
platform
16S rRNA sequencing of human duodenal samples: XS
title
human gut metagenome
title