MIGS/MIMS/MIMARKS.plant-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2022-04-12
ENA-FIRST-PUBLIC
2022-04-12
ENA-LAST-UPDATE
SAMN27487446
External Id
pda|dastogeer
INSDC center alias
pda|dastogeer
INSDC center name
2022-04-12T01:35:45Z
INSDC first public
2022-04-12T01:35:45Z
INSDC last update
public
INSDC status
SRS12574650
SRA accession
FDG2
Submitter Id
NCBI
broker name
2019-09-21
collection_date
Sequencing was performed on the Illumina MiSeq platform using the Illumina MiSeq reagent kit v3 2x 300bps paired-end chemistry as per manufacturers instructions.
design_description
missing
env_broad_scale
missing
env_local_scale
rice grain
env_medium
FDG2_S184_L001_R1_001.fastq.gz
filename
FDG2_S184_L001_R2_001.fastq.gz
filename2
fastq
filetype
Japan:Fukushima
geo_loc_name
Oryza sativa subsp. japonica
host
Illumina MiSeq
instrument_model
37.602373 N 140.586406 E
lat_lon
S1_Replicate_2
library_id
paired
library_layout
PCR
library_selection
METAGENOMIC
library_source
AMPLICON
library_strategy
plant metagenome
http://purl.obolibrary.org/obo/NCBITaxon_1297885
organism
ILLUMINA
platform
Could we engineer synthetic and functionally programmable plant microbiome that can through lifeline to rice plants against pathogenic infection?
title
Fukushima Surface sterilized grain of blast infected rice plant2
title