SAMN27649434
SAMN27649434
External Id
SARS-CoV-2/Human/USA/RI-CDC-LC0576147/2022
External Id
CDC-OAMD
INSDC center name
2022-04-20T00:00:00Z
INSDC first public
2022-07-22T22:12:44.360Z
INSDC last update
SRS14122535
INSDC secondary accession
live
INSDC status
SARS-CoV-2/Human/USA/RI-CDC-LC0576147/2022
Isolate
SARS-CoV-2: clinical or host-associated
NCBI submission model
SARS-CoV-2.cl.1.0
NCBI submission package
SRS14122535
SRA accession
Laboratory Corporation of America
collected_by
2022-04-01
collection_date
Nasal Swabs
collection_device
Nasal Swabs
collection_method
N1 gene
diagnostic_gene_name_1
N2 gene
diagnostic_gene_name_2
RP gene
diagnostic_gene_name_3
22.665
diagnostic_pcr_Ct_value_1
20.911
diagnostic_pcr_Ct_value_2
29.751
diagnostic_pcr_Ct_value_3
Labcorp LDT
diagnostic_pcr_protocol_1
Labcorp LDT
diagnostic_pcr_protocol_2
Labcorp LDT
diagnostic_pcr_protocol_3
USA: Rhode Island
geo_loc_name
Homo sapiens
host
12
host_age
COVID-19
host_disease
Unknown
host_race
female
host_sex
Nasal Swabs
isolation_source
BA.2
lineage/clade name
Severe acute respiratory syndrome coronavirus 2
http://purl.obolibrary.org/obo/NCBITaxon_2697049
organism
baseline surveillance (random sampling)
purpose_of_sequencing
CDC Sars CoV2 Sequencing Baseline Constellation
title