SAMN27650513
SAMN27650513
External Id
SARS-CoV-2/Human/USA/NJ-CDC-LC0572891/2022
External Id
CDC-OAMD
INSDC center name
2022-04-20T00:00:00Z
INSDC first public
2022-07-22T22:03:17.533Z
INSDC last update
SRS14120934
INSDC secondary accession
live
INSDC status
SARS-CoV-2/Human/USA/NJ-CDC-LC0572891/2022
Isolate
SARS-CoV-2: clinical or host-associated
NCBI submission model
SARS-CoV-2.cl.1.0
NCBI submission package
SRS14120934
SRA accession
Laboratory Corporation of America
collected_by
2022-04-05
collection_date
Nasal Swabs
collection_device
Nasal Swabs
collection_method
N1 gene
diagnostic_gene_name_1
N2 gene
diagnostic_gene_name_2
RP gene
diagnostic_gene_name_3
20.219
diagnostic_pcr_Ct_value_1
18.004
diagnostic_pcr_Ct_value_2
26.387
diagnostic_pcr_Ct_value_3
Labcorp LDT
diagnostic_pcr_protocol_1
Labcorp LDT
diagnostic_pcr_protocol_2
Labcorp LDT
diagnostic_pcr_protocol_3
USA: New Jersey
geo_loc_name
Homo sapiens
host
0
host_age
COVID-19
host_disease
Unknown
host_race
male
host_sex
Nasal Swabs
isolation_source
BA.1.1
lineage/clade name
Severe acute respiratory syndrome coronavirus 2
http://purl.obolibrary.org/obo/NCBITaxon_2697049
organism
baseline surveillance (random sampling)
purpose_of_sequencing
CDC Sars CoV2 Sequencing Baseline Constellation
title