SARS-CoV-2/Human/USA/NY-CDC-FG-196299/2021
External Id
SAMN24493997
External Id
CDC-OAMD
INSDC center name
2021-12-29T00:00:00Z
INSDC first public
2022-07-14T04:21:50.977Z
INSDC last update
SRS13857596
INSDC secondary accession
live
INSDC status
SARS-CoV-2: clinical or host-associated
NCBI submission model
SARS-CoV-2.cl.1.0
NCBI submission package
SRS13857596
SRA accession
Fulgent Genetics
collected by
2021-12-08
collection date
RNA
collection method
RNA
collection_device
SC2
http://www.ebi.ac.uk/efo/EFO_0006481
diagnostic_gene_name_1
N1
diagnostic_gene_name_2
N2
http://www.ebi.ac.uk/efo/EFO_0004028
diagnostic_gene_name_3
Covid-19-CDC
diagnostic_pcr_protocol_1
Covid-19-CDC
diagnostic_pcr_protocol_2
Covid-19-CDC
diagnostic_pcr_protocol_3
USA: New York
geo loc name
Homo sapiens
http://purl.obolibrary.org/obo/NCBITaxon_9606
host
9
host age
COVID-19
http://purl.obolibrary.org/obo/MONDO_0100096
host disease
DTA
host race
female
http://purl.obolibrary.org/obo/PATO_0000383
host sex
SARS-CoV-2/Human/USA/NY-CDC-FG-196299/2021
isolate
RNA
isolation source
AY.103
http://www.ebi.ac.uk/efo/EFO_0007874
lineage/clade name
Severe acute respiratory syndrome coronavirus 2
http://purl.obolibrary.org/obo/NCBITaxon_2697049
organism
baseline surveillance (random sampling)
purpose_of_sequencing
CDC Sars CoV2 Sequencing Baseline Constellation
title