PRJNA669536
BioProject_Accession
SAMN29873543
External Id
SR21-14081
External Id
EPI_ISL_2587618
GISAID_accession
hCoV-19/Canada/SK-NML-74347/2021
GISAID_virus_name
COVID-19
Host_Disease
CanCOGeN: Canadian Public Health Laboratory SARS-CoV-2 submission group
INSDC center name
2022-07-21T00:00:00Z
INSDC first public
2022-07-29T12:22:31.422Z
INSDC last update
live
INSDC status
Pathogen.cl
NCBI submission model
Pathogen.cl.1.0
NCBI submission package
Not Provided
anatomical_material
Not Provided
anatomical_part
Pathogen.cl
attribute_package
Not Provided
body_product
Saskatchewan - Roy Romanow Provincial Laboratory (RRPL)
collected_by
2021-05-11
collection_date
Not Provided
collection_device
Not Provided
collection_method
nan
description
21.85
diagnostic_PCR_CT_value_1
Not Provided
diagnostic_PCR_CT_value_2
Not Provided
environmental_material
Not Provided
environmental_site
E (orf4)
gene_name_1
Not Provided
gene_name_2
Canada: Saskatchewan
geo_loc_name
Homo sapiens
host
Missing
host_age
Missing
host_age_bin
Missing
host_age_unit
nan
host_disease_outcome
nan
host_health_state
Missing
host_sex
nan
host_specimen_voucher
nan
host_subject_id
SARS-CoV-2/human/CAN/SK-NML-74347/2021
isolate
Not Provided
isolation_source
nan
lab_host
Missing
lat_lon
Severe acute respiratory syndrome coronavirus 2
http://purl.obolibrary.org/obo/NCBITaxon_2697049
organism
Severe acute respiratory syndrome coronavirus 2
organism
Original
passage_history
nan
passage_method
Diagnostic testing
purpose_of_sampling
Baseline surveillance (random sampling)
purpose_of_sequencing
Keith.Mackenzie@saskhealthauthority.ca
sample_collector_contact_email
SR21-14081
sample_name
National Microbiology Laboratory (NML)
sequenced_by
Pathogen: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2
title