SARS-CoV-2: clinical or host-associated
BioSampleModel
2022-07-28
ENA-FIRST-PUBLIC
2022-07-28
ENA-LAST-UPDATE
SAMN29965070
External Id
CDC-OAMD
INSDC center alias
CDC-OAMD
INSDC center name
2022-07-28T02:01:06Z
INSDC first public
2022-07-28T02:01:06Z
INSDC last update
public
INSDC status
SARS-CoV-2/Human/USA/NJ-CDC-LC0780090/2022
Isolate
SRS14313536
SRA accession
SARS-CoV-2/Human/USA/NJ-CDC-LC0780090/2022
Submitter Id
NCBI
broker name
Laboratory Corporation of America
collected_by
2022-07-13
collection_date
Nasal Swabs
collection_device
Nasal Swabs
collection_method
N1 gene
diagnostic_gene_name_1
N2 gene
diagnostic_gene_name_2
RP gene
diagnostic_gene_name_3
24.497
diagnostic_pcr_Ct_value_1
20.65
diagnostic_pcr_Ct_value_2
33.448
diagnostic_pcr_Ct_value_3
Labcorp LDT
diagnostic_pcr_protocol_1
Labcorp LDT
diagnostic_pcr_protocol_2
Labcorp LDT
diagnostic_pcr_protocol_3
USA: New Jersey
geo_loc_name
Homo sapiens
host
68
host_age
COVID-19
host_disease
female
host_sex
Nasal Swabs
isolation_source
BF.5
lineage/clade name
Severe acute respiratory syndrome coronavirus 2
http://purl.obolibrary.org/obo/NCBITaxon_2697049
organism
baseline surveillance (random sampling)
purpose_of_sequencing
CDC Sars CoV2 Sequencing Baseline Constellation
title