PRJNA669536
BioProject_Accession
SAMN29958788
External Id
SK10000396953
External Id
EPI_ISL_5843921
GISAID_accession
hCoV-19/Canada/SK-RRPL-133065/2021
GISAID_virus_name
COVID-19
Host_Disease
CanCOGeN: Canadian Public Health Laboratory SARS-CoV-2 submission group
INSDC center name
2022-07-25T00:00:00Z
INSDC first public
2022-07-29T12:32:16.977Z
INSDC last update
live
INSDC status
Pathogen.cl
NCBI submission model
Pathogen.cl.1.0
NCBI submission package
Not Applicable
anatomical_material
Nasopharynx (NP)
anatomical_part
Pathogen.cl
attribute_package
Not Applicable
body_product
Saskatchewan - Roy Romanow Provincial Laboratory (RRPL)
collected_by
2021-03-31
collection_date
Swab
collection_device
Swabbing
collection_method
nan
description
Not Provided
diagnostic_PCR_CT_value_1
Not Provided
diagnostic_PCR_CT_value_2
Not Applicable
environmental_material
Not Applicable
environmental_site
Not Provided
gene_name_1
Not Provided
gene_name_2
Canada: Saskatchewan
geo_loc_name
Homo sapiens
host
17
host_age
10-19
host_age_bin
Year
host_age_unit
nan
host_disease_outcome
nan
host_health_state
male
host_sex
nan
host_specimen_voucher
nan
host_subject_id
SARS-CoV-2/human/CAN/SK-RRPL-133065/2021
isolate
Nasopharynx (NP): Swab
isolation_source
nan
lab_host
Missing
lat_lon
Severe acute respiratory syndrome coronavirus 2
http://purl.obolibrary.org/obo/NCBITaxon_2697049
organism
Severe acute respiratory syndrome coronavirus 2
organism
Original
passage_history
nan
passage_method
Diagnostic testing
purpose_of_sampling
Baseline surveillance (random sampling)
purpose_of_sequencing
Keith.Mackenzie@saskhealthauthority.ca
sample_collector_contact_email
SK10000396953
sample_name
Saskatchewan - Roy Romanow Provincial Laboratory (RRPL)
sequenced_by
Pathogen: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2
title