SARS-CoV-2: wastewater surveillance
BioSampleModel
2022-08-03
ENA-FIRST-PUBLIC
2022-08-03
ENA-LAST-UPDATE
SAMN30086790
External Id
pda|pgupta@utah.gov
INSDC center alias
pda|pgupta@utah.gov
INSDC center name
2022-08-03T03:12:55Z
INSDC first public
2022-08-03T03:12:55Z
INSDC last update
public
INSDC status
SRS14385018
SRA accession
220516-JSSDWRF36-UT
Submitter Id
NCBI
broker name
2022-05-12
collection_date
USA: Utah
geo_loc_name
wastewater
isolation_source
wastewater metagenome
http://purl.obolibrary.org/obo/NCBITaxon_527639
organism
public health surveillance community-level
purpose_of_ww_sampling
characterize diversity of lineages and mutations across entire genome
purpose_of_ww_sequencing
UPHL
sequenced_by
wastewater metagenome
title
1052344.47484
ww_flow
2395
ww_population
https://uofuhealth.utah.edu/huntsman/utah-population-database/
ww_population_source
no
ww_pre_treatment
Promega wastewater large volume TNA capture kit,Promega automated TNA kit
ww_processing_protocol
24
ww_sample_duration
raw wastewater
ww_sample_matrix
wastewater treatment plant
ww_sample_site
composite
ww_sample_type
UT
ww_surv_jurisdiction
5882
ww_surv_system_sample_id
SARS-CoV-2
ww_surv_target_1
277220
ww_surv_target_1_conc
copies/L wastewater
ww_surv_target_1_conc_unit
N1 & N2 combined
ww_surv_target_1_gene
no
ww_surv_target_1_known_present
IDT Research Use Only Kit (https://www.idtdna.com/pages/landing/coronavirus-research-reagents/cdc-assays)
ww_surv_target_1_protocol