SAMN24056666
External Id
SARS-CoV-2/Human/USA/MN-CDC-IBX667507208332/2021
External Id
CDC-OAMD
INSDC center name
2021-12-15T00:00:00Z
INSDC first public
2022-08-07T21:09:18.810Z
INSDC last update
SRS14554538
INSDC secondary accession
live
INSDC status
SARS-CoV-2: clinical or host-associated
NCBI submission model
SARS-CoV-2.cl.1.0
NCBI submission package
SRS14554538
SRA accession
Infinity Biologix
collected by
2021-11-28
collection date
Nasal Swab
http://purl.obolibrary.org/obo/NCIT_C155833
collection method
Nasal Swab
http://purl.obolibrary.org/obo/NCIT_C155833
collection_device
N gene
diagnostic_gene_name_1
15.3
diagnostic_pcr_Ct_value_1
TaqPath
diagnostic_pcr_protocol_1
USA: Minnesota
geo loc name
Homo sapiens
http://purl.obolibrary.org/obo/NCBITaxon_9606
host
COVID-19
http://purl.obolibrary.org/obo/MONDO_0100096
host disease
SARS-CoV-2/Human/USA/MN-CDC-IBX667507208332/2021
isolate
nasal swab
http://purl.obolibrary.org/obo/NCIT_C155833
isolation source
AY.122
http://www.ebi.ac.uk/efo/EFO_0007874
lineage/clade name
Severe acute respiratory syndrome coronavirus 2
http://purl.obolibrary.org/obo/NCBITaxon_2697049
organism
baseline surveillance (random sampling)
purpose_of_sequencing
CDC Sars CoV2 Sequencing Baseline Constellation
title