SAMN25085450
External Id
SARS-CoV-2/Human/USA/WI-CDC-QDX32535177/2021
External Id
CDC-OAMD
INSDC center name
2022-01-19T00:00:00Z
INSDC first public
2022-08-05T14:05:15.540Z
INSDC last update
SRS14463346
INSDC secondary accession
live
INSDC status
SARS-CoV-2: clinical or host-associated
NCBI submission model
SARS-CoV-2.cl.1.0
NCBI submission package
SRS14463346
SRA accession
Quest Diagnostics Incorporated
collected by
2021-12-27
collection date
Nasal Swabs
http://purl.obolibrary.org/obo/NCIT_C155833
collection method
Nasal Swabs
http://purl.obolibrary.org/obo/NCIT_C155833
collection_device
19.46
diagnostic_pcr_Ct_value_1
Roche
diagnostic_pcr_protocol_1
USA: Wisconsin
geo loc name
Homo sapiens
http://purl.obolibrary.org/obo/NCBITaxon_9606
host
40
host age
COVID-19
http://purl.obolibrary.org/obo/MONDO_0100096
host disease
WHITE
http://purl.obolibrary.org/obo/HANCESTRO_0005
host race
female
http://purl.obolibrary.org/obo/PATO_0000383
host sex
SARS-CoV-2/Human/USA/WI-CDC-QDX32535177/2021
isolate
Nasal Swabs
http://purl.obolibrary.org/obo/NCIT_C155833
isolation source
AY.25
http://www.ebi.ac.uk/efo/EFO_0007874
lineage/clade name
Severe acute respiratory syndrome coronavirus 2
http://purl.obolibrary.org/obo/NCBITaxon_2697049
organism
baseline surveillance (random sampling)
purpose_of_sequencing
CDC Sars CoV2 Sequencing Baseline Constellation
title