SAMN24167480
External Id
SARS-CoV-2/Human/USA/WA-CDC-UW21120647693/2021
External Id
CDC-OAMD
INSDC center name
2021-12-17T00:00:00Z
INSDC first public
2022-08-07T13:23:24.910Z
INSDC last update
SRS14542895
INSDC secondary accession
live
INSDC status
SARS-CoV-2: clinical or host-associated
NCBI submission model
SARS-CoV-2.cl.1.0
NCBI submission package
SRS14542895
SRA accession
UW Virology Lab
collected by
2021-12-06
collection date
Nasal
collection method
Nasal
collection_device
ct
diagnostic_gene_name_1
20.77
diagnostic_pcr_Ct_value_1
Roche Cobas
diagnostic_pcr_protocol_1
USA: Washington
geo loc name
Homo sapiens
http://purl.obolibrary.org/obo/NCBITaxon_9606
host
12
host age
COVID-19
http://purl.obolibrary.org/obo/MONDO_0100096
host disease
Asian
http://purl.obolibrary.org/obo/HANCESTRO_0008
host race
male
http://purl.obolibrary.org/obo/PATO_0000384
host sex
SARS-CoV-2/Human/USA/WA-CDC-UW21120647693/2021
isolate
nasal
isolation source
BA.1
lineage/clade name
Severe acute respiratory syndrome coronavirus 2
http://purl.obolibrary.org/obo/NCBITaxon_2697049
organism
baseline surveillance (random sampling)
purpose_of_sequencing
CDC Sars CoV2 Sequencing Baseline Constellation
title