SAMN25158873
External Id
SARS-CoV-2/Human/USA/TX-CDC-QDX32535033/2021
External Id
CDC-OAMD
INSDC center name
2022-01-21T00:00:00Z
INSDC first public
2022-08-06T05:08:37.613Z
INSDC last update
SRS14494802
INSDC secondary accession
live
INSDC status
SARS-CoV-2: clinical or host-associated
NCBI submission model
SARS-CoV-2.cl.1.0
NCBI submission package
SRS14494802
SRA accession
Quest Diagnostics Incorporated
collected by
2021-12-29
collection date
Nasal Swabs
http://purl.obolibrary.org/obo/NCIT_C155833
collection method
Nasal Swabs
http://purl.obolibrary.org/obo/NCIT_C155833
collection_device
Hologic
diagnostic_pcr_protocol_1
USA: Texas
geo loc name
Homo sapiens
http://purl.obolibrary.org/obo/NCBITaxon_9606
host
0
host age
COVID-19
http://purl.obolibrary.org/obo/MONDO_0100096
host disease
female
http://purl.obolibrary.org/obo/PATO_0000383
host sex
SARS-CoV-2/Human/USA/TX-CDC-QDX32535033/2021
isolate
Nasal Swabs
http://purl.obolibrary.org/obo/NCIT_C155833
isolation source
BA.1
lineage/clade name
Severe acute respiratory syndrome coronavirus 2
http://purl.obolibrary.org/obo/NCBITaxon_2697049
organism
baseline surveillance (random sampling)
purpose_of_sequencing
CDC Sars CoV2 Sequencing Baseline Constellation
title