SAMN23772180
External Id
SARS-CoV-2/Human/USA/MI-CDC-QDX31282039/2021
External Id
CDC-OAMD
INSDC center name
2021-12-08T00:00:00Z
INSDC first public
2022-08-09T02:13:25.497Z
INSDC last update
SRS14583689
INSDC secondary accession
live
INSDC status
SARS-CoV-2: clinical or host-associated
NCBI submission model
SARS-CoV-2.cl.1.0
NCBI submission package
SRS14583689
SRA accession
Quest Diagnostics Incorporated
collected by
2021-11-16
collection date
Nasal Swabs
http://purl.obolibrary.org/obo/NCIT_C155833
collection method
Nasal Swabs
http://purl.obolibrary.org/obo/NCIT_C155833
collection_device
23.54
diagnostic_pcr_Ct_value_1
Roche
diagnostic_pcr_protocol_1
USA: Michigan
geo loc name
Homo sapiens
http://purl.obolibrary.org/obo/NCBITaxon_9606
host
17
host age
COVID-19
http://purl.obolibrary.org/obo/MONDO_0100096
host disease
female
http://purl.obolibrary.org/obo/PATO_0000383
host sex
SARS-CoV-2/Human/USA/MI-CDC-QDX31282039/2021
isolate
Nasal Swabs
http://purl.obolibrary.org/obo/NCIT_C155833
isolation source
B.1.617.2
lineage/clade name
Severe acute respiratory syndrome coronavirus 2
http://purl.obolibrary.org/obo/NCBITaxon_2697049
organism
baseline surveillance (random sampling)
purpose_of_sequencing
CDC Sars CoV2 Sequencing Baseline Constellation
title