SARS-CoV-2: clinical or host-associated
BioSampleModel
2022-08-11
ENA-FIRST-PUBLIC
2022-08-11
ENA-LAST-UPDATE
SAMN27676743
External Id
CDC-OAMD
INSDC center alias
CDC-OAMD
INSDC center name
2022-08-11T03:21:37Z
INSDC first public
2022-08-11T03:21:37Z
INSDC last update
public
INSDC status
SARS-CoV-2/Human/USA/CA-CDC-ASC210853319/2022
Isolate
SRS14420557
SRA accession
SARS-CoV-2/Human/USA/CA-CDC-ASC210853319/2022
Submitter Id
NCBI
broker name
Aegis Sciences Corporation
collected_by
2022-04-07
collection_date
Nasal - Anterior Nares
collection_device
Nasal - Anterior Nares
collection_method
N gene
diagnostic_gene_name_1
S gene
diagnostic_gene_name_2
ORF1ab
diagnostic_gene_name_3
17.4681
diagnostic_pcr_Ct_value_1
16.899408
diagnostic_pcr_Ct_value_2
16.244026
diagnostic_pcr_Ct_value_3
TaqPath COVID-19 Combo Kit
diagnostic_pcr_protocol_1
TaqPath COVID-19 Combo Kit
diagnostic_pcr_protocol_2
TaqPath COVID-19 Combo Kit
diagnostic_pcr_protocol_3
USA: California
geo_loc_name
Homo sapiens
host
58
host_age
COVID-19
host_disease
Asian
host_race
female
host_sex
Nasal - Anterior Nares
isolation_source
BA.2.10
lineage/clade name
Severe acute respiratory syndrome coronavirus 2
http://purl.obolibrary.org/obo/NCBITaxon_2697049
organism
baseline surveillance (random sampling)
purpose_of_sequencing
CDC Sars CoV2 Sequencing Baseline Constellation
title