SARS-CoV-2: clinical or host-associated
BioSampleModel
2022-08-13
ENA-FIRST-PUBLIC
2022-08-13
ENA-LAST-UPDATE
SAMN30225043
External Id
pda|waqasnayab@gmail.com
INSDC center alias
pda|waqasnayab@gmail.com
INSDC center name
2022-08-13T01:39:14Z
INSDC first public
2022-08-13T01:39:14Z
INSDC last update
public
INSDC status
SRS14618076
SRA accession
hCoV-19/Pakistan/IDRL-AKU-KHI-67691-S5/2022
Submitter Id
NCBI
broker name
Clinical Lab, Aga Khan University Hospital
collected_by
2022-07-03
collection_date
Sterile Dacron Swab
collection_device
Pakistan: Karachi
geo_loc_name
hCoV-19/Pakistan/IDRL-AKU-KHI-67691-S5/2022
gisaid_virus_name
Homo sapiens
host
40
host_age
nasopharynx
host_anatomical_part
COVID-39
host_disease
Diabetes, Varicose veins, PCOS, Endometrial hyperplasia, Fever, cough with sputum, chills and body aches, Visited ER and was discharged on same day, was managed as non severe COVID pneumonia
host_disease_outcome
female
host_sex
67691
isolate
nasal swab
isolation_source
Severe acute respiratory syndrome coronavirus 2
http://purl.obolibrary.org/obo/NCBITaxon_2697049
organism
Diagnostic testing
purpose_of_sampling
baseline surveillance (random sampling)
purpose_of_sequencing
Infectious Diseases Research Laboratory, Department of Pediatrics and Child Health, Faculty of Health Sciences, Medical College, The Aga Khan University, Stadium Road, Karachi-74800, Pakistan
sequenced_by
Severe acute respiratory syndrome coronavirus 2
title