SAMN30308701
External Id
The Aga Khan University
INSDC center name
2022-08-15T00:00:00Z
INSDC first public
2022-08-15T02:18:21.123Z
INSDC last update
SRS14646636
INSDC secondary accession
live
INSDC status
SARS-CoV-2: clinical or host-associated
NCBI submission model
SARS-CoV-2.cl.1.0
NCBI submission package
SRS14646636
SRA accession
Clinical Lab, Aga Khan University Hospital
collected_by
2022-07-19
collection_date
Sterile Dacron Swab
collection_device
Pakistan: Karachi
geo_loc_name
hCoV-19/Pakistan/IDRL-AKU-KHI-72282-IDRL-AKU-S9/2022
gisaid_virus_name
Homo sapiens
host
22
host_age
nasopharynx
host_anatomical_part
COVID-19
host_disease
stayed in ER for a day with fever, sore throat, nausea, vominting and weakness
host_disease_outcome
female
host_sex
72282
isolate
nasal swab
isolation_source
Severe acute respiratory syndrome coronavirus 2
http://purl.obolibrary.org/obo/NCBITaxon_2697049
organism
Diagnostic testing
purpose_of_sampling
baseline surveillance (random sampling)
purpose_of_sequencing
Infectious Diseases Research Laboratory, Department of Pediatrics and Child Health, Faculty of Health Sciences, Medical College, The Aga Khan University, Stadium Road, Karachi-74800, Pakistan
sequenced_by
SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2
title