SARS-CoV-2/Human/USA/RI-CDC-2-5987629/2022
External Id
SAMN28679819
External Id
CDC DVD Genomics and DIscovery Team
INSDC center name
2022-05-26T00:00:00Z
INSDC first public
2022-08-26T16:58:18.493Z
INSDC last update
SRS14796350
INSDC secondary accession
live
INSDC status
SARS-CoV-2/Human/USA/RI-CDC-2-5987629/2022
Isolate
SARS-CoV-2: clinical or host-associated
NCBI submission model
SARS-CoV-2.cl.1.0
NCBI submission package
SRS14796350
SRA accession
RI State Health Laboratories
collected_by
2022-04-27
collection_date
Nasopharyngeal swab
collection_device
Nasopharyngeal swab
collection_method
N
diagnostic_gene_name_1
20.387008806
diagnostic_pcr_Ct_value_1
Swift Primers V2
diagnostic_pcr_protocol_1
USA: Rhode Island
geo_loc_name
Homo sapiens
host
COVID-19
host_disease
nasopharyngeal swab
isolation_source
BA.2
lineage/clade name
Severe acute respiratory syndrome coronavirus 2
http://purl.obolibrary.org/obo/NCBITaxon_2697049
organism
baseline surveillance (random sampling)
purpose_of_sequencing
National SARS-CoV-2 Surveillance
title