SAMN23454564
External Id
SARS-CoV-2/Human/USA/NJ-CDC-2-5163913/2021
External Id
CDC DVD Genomics and DIscovery Team
INSDC center name
2021-11-26T00:00:00Z
INSDC first public
2022-08-27T02:12:25.677Z
INSDC last update
SRS14820269
INSDC secondary accession
live
INSDC status
SARS-CoV-2: clinical or host-associated
NCBI submission model
SARS-CoV-2.cl.1.0
NCBI submission package
SRS14820269
SRA accession
NJ Public Health and Environmental Laboratories
collected by
2021-10-30
collection date
Anterior nasal swab
collection method
Anterior nasal swab
collection_device
N
diagnostic_gene_name_1
20.26
diagnostic_pcr_Ct_value_1
Swift Primers V2
diagnostic_pcr_protocol_1
USA: New Jersey
geo loc name
Homo sapiens
http://purl.obolibrary.org/obo/NCBITaxon_9606
host
COVID-19
http://purl.obolibrary.org/obo/MONDO_0100096
host disease
male
http://purl.obolibrary.org/obo/PATO_0000384
host sex
SARS-CoV-2/Human/USA/NJ-CDC-2-5163913/2021
isolate
Anterior nasal swab
isolation source
AY.74
http://www.ebi.ac.uk/efo/EFO_0007874
lineage/clade name
Severe acute respiratory syndrome coronavirus 2
http://purl.obolibrary.org/obo/NCBITaxon_2697049
organism
baseline surveillance (random sampling)
purpose_of_sequencing
National SARS-CoV-2 Surveillance
title