SARS-CoV-2/Human/USA/MN-CDC-IBX385619335415/2021
External Id
SAMN25169463
External Id
CDC-OAMD
INSDC center name
2022-01-22T00:00:00Z
INSDC first public
2022-08-27T00:37:19.933Z
INSDC last update
SRS14815879
INSDC secondary accession
live
INSDC status
SARS-CoV-2: clinical or host-associated
NCBI submission model
SARS-CoV-2.cl.1.0
NCBI submission package
SRS14815879
SRA accession
Infinity Biologix
collected by
2021-12-29
collection date
Nasal Swab
http://purl.obolibrary.org/obo/NCIT_C155833
collection method
Nasal Swab
http://purl.obolibrary.org/obo/NCIT_C155833
collection_device
N gene
diagnostic_gene_name_1
21.1
diagnostic_pcr_Ct_value_1
TaqPath
diagnostic_pcr_protocol_1
USA: Minnesota
geo loc name
Homo sapiens
http://purl.obolibrary.org/obo/NCBITaxon_9606
host
COVID-19
http://purl.obolibrary.org/obo/MONDO_0100096
host disease
SARS-CoV-2/Human/USA/MN-CDC-IBX385619335415/2021
isolate
nasal swab
http://purl.obolibrary.org/obo/NCIT_C155833
isolation source
BA.1
lineage/clade name
Severe acute respiratory syndrome coronavirus 2
http://purl.obolibrary.org/obo/NCBITaxon_2697049
organism
baseline surveillance (random sampling)
purpose_of_sequencing
CDC Sars CoV2 Sequencing Baseline Constellation
title