SAMN26654758
External Id
SARS-CoV-2/Human/USA/CA-CDC-STM-GW2GWSW68/2022
External Id
CDC-OAMD
INSDC center name
2022-03-14T00:00:00Z
INSDC first public
2022-08-27T04:28:34.197Z
INSDC last update
SRS14831660
INSDC secondary accession
live
INSDC status
SARS-CoV-2: clinical or host-associated
NCBI submission model
SARS-CoV-2.cl.1.0
NCBI submission package
SRS14831660
SRA accession
'Helix'
collected by
2022-02-25
collection date
Nasal swab
http://purl.obolibrary.org/obo/NCIT_C155833
collection method
Nasal swab
http://purl.obolibrary.org/obo/NCIT_C155833
collection_device
N
diagnostic_gene_name_1
ORF1ab
diagnostic_gene_name_2
S
diagnostic_gene_name_3
Helix COVID-19 and Flu Test
diagnostic_pcr_protocol_1
Helix COVID-19 and Flu Test
diagnostic_pcr_protocol_2
Helix COVID-19 and Flu Test
diagnostic_pcr_protocol_3
USA: California
geo loc name
Homo sapiens
http://purl.obolibrary.org/obo/NCBITaxon_9606
host
38
host age
COVID-19
http://purl.obolibrary.org/obo/MONDO_0100096
host disease
White
http://purl.obolibrary.org/obo/HANCESTRO_0005
host race
male
http://purl.obolibrary.org/obo/PATO_0000384
host sex
SARS-CoV-2/Human/USA/CA-CDC-STM-GW2GWSW68/2022
isolate
nasal swab
http://purl.obolibrary.org/obo/NCIT_C155833
isolation source
Severe acute respiratory syndrome coronavirus 2
http://purl.obolibrary.org/obo/NCBITaxon_2697049
organism
baseline surveillance (random sampling)
purpose_of_sequencing
CDC Sars CoV2 Sequencing Baseline Constellation
title