SARS-CoV-2/Human/USA/PA-CDC-2-5084020/2021
External Id
SAMN23213420
External Id
CDC DVD Genomics and DIscovery Team
INSDC center name
2021-11-16T00:00:00Z
INSDC first public
2022-08-26T04:40:50.500Z
INSDC last update
SRS14784051
INSDC secondary accession
live
INSDC status
SARS-CoV-2: clinical or host-associated
NCBI submission model
SARS-CoV-2.cl.1.0
NCBI submission package
SRS14784051
SRA accession
PA Department of Health, Bureau of Laboratories
collected by
2021-10-05
collection date
N
diagnostic_gene_name_1
Swift Primers V2
diagnostic_pcr_protocol_1
USA: Pennsylvania
geo loc name
Homo sapiens
http://purl.obolibrary.org/obo/NCBITaxon_9606
host
COVID-19
http://purl.obolibrary.org/obo/MONDO_0100096
host disease
male
http://purl.obolibrary.org/obo/PATO_0000384
host sex
SARS-CoV-2/Human/USA/PA-CDC-2-5084020/2021
isolate
AY.44
http://www.ebi.ac.uk/efo/EFO_0007874
lineage/clade name
Severe acute respiratory syndrome coronavirus 2
http://purl.obolibrary.org/obo/NCBITaxon_2697049
organism
baseline surveillance (random sampling)
purpose_of_sequencing
National SARS-CoV-2 Surveillance
title