SAMN27598013
External Id
SARS-CoV-2/Human/USA/VT-CDC-ASC210721483/2022
External Id
CDC-OAMD
INSDC center name
2022-04-15T00:00:00Z
INSDC first public
2022-08-30T13:36:15.557Z
INSDC last update
SRS14907432
INSDC secondary accession
live
INSDC status
SARS-CoV-2/Human/USA/VT-CDC-ASC210721483/2022
Isolate
SARS-CoV-2: clinical or host-associated
NCBI submission model
SARS-CoV-2.cl.1.0
NCBI submission package
SRS14907432
SRA accession
Aegis Sciences Corporation
collected_by
2022-03-30
collection_date
Nasal - Anterior Nares
collection_device
Nasal - Anterior Nares
collection_method
N gene
diagnostic_gene_name_1
S gene
diagnostic_gene_name_2
ORF1ab
diagnostic_gene_name_3
19.35563
diagnostic_pcr_Ct_value_1
18.377048
diagnostic_pcr_Ct_value_3
TaqPath COVID-19 Combo Kit
diagnostic_pcr_protocol_1
TaqPath COVID-19 Combo Kit
diagnostic_pcr_protocol_2
TaqPath COVID-19 Combo Kit
diagnostic_pcr_protocol_3
USA: Vermont
geo_loc_name
Homo sapiens
host
51
host_age
COVID-19
host_disease
White
host_race
male
host_sex
Nasal - Anterior Nares
isolation_source
BA.1.1
lineage/clade name
Severe acute respiratory syndrome coronavirus 2
http://purl.obolibrary.org/obo/NCBITaxon_2697049
organism
baseline surveillance (random sampling)
purpose_of_sequencing
CDC Sars CoV2 Sequencing Baseline Constellation
title