SARS-CoV-2/Human/USA/NY-CDC-ASC210850027/2022
External Id
SAMN27576022
External Id
CDC-OAMD
INSDC center name
2022-04-14T00:00:00Z
INSDC first public
2022-08-30T13:46:45.280Z
INSDC last update
SRS14909394
INSDC secondary accession
live
INSDC status
SARS-CoV-2/Human/USA/NY-CDC-ASC210850027/2022
Isolate
SARS-CoV-2: clinical or host-associated
NCBI submission model
SARS-CoV-2.cl.1.0
NCBI submission package
SRS14909394
SRA accession
Aegis Sciences Corporation
collected_by
2022-03-31
collection_date
Nasal - Anterior Nares
collection_device
Nasal - Anterior Nares
collection_method
N gene
diagnostic_gene_name_1
S gene
diagnostic_gene_name_2
ORF1ab
diagnostic_gene_name_3
15.532834
diagnostic_pcr_Ct_value_1
15.0888815
diagnostic_pcr_Ct_value_2
14.748249
diagnostic_pcr_Ct_value_3
TaqPath COVID-19 Combo Kit
diagnostic_pcr_protocol_1
TaqPath COVID-19 Combo Kit
diagnostic_pcr_protocol_2
TaqPath COVID-19 Combo Kit
diagnostic_pcr_protocol_3
USA: New York
geo_loc_name
Homo sapiens
host
42
host_age
COVID-19
host_disease
White
host_race
male
host_sex
Nasal - Anterior Nares
isolation_source
BA.2
lineage/clade name
Severe acute respiratory syndrome coronavirus 2
http://purl.obolibrary.org/obo/NCBITaxon_2697049
organism
baseline surveillance (random sampling)
purpose_of_sequencing
CDC Sars CoV2 Sequencing Baseline Constellation
title