SARS-CoV-2: clinical or host-associated
BioSampleModel
2022-09-08
ENA-FIRST-PUBLIC
2022-09-08
ENA-LAST-UPDATE
SAMN30685072
External Id
CDC-OAMD
INSDC center alias
CDC-OAMD
INSDC center name
2022-09-08T01:30:06Z
INSDC first public
2022-09-08T01:30:06Z
INSDC last update
public
INSDC status
SARS-CoV-2/Human/USA/GA-CDC-MMB11932788/2021
Isolate
SRS15019279
SRA accession
SARS-CoV-2/Human/USA/GA-CDC-MMB11932788/2021
Submitter Id
NCBI
broker name
Mako Medical
collected_by
2021-12-01
collection_date
Nasal Swab
collection_device
Nasal Swab
collection_method
ORF1ab
diagnostic_gene_name_1
N gene
diagnostic_gene_name_2
S gene
diagnostic_gene_name_3
MS2
diagnostic_gene_name_4
18.606
diagnostic_pcr_Ct_value_1
19.322
diagnostic_pcr_Ct_value_2
1
diagnostic_pcr_Ct_value_3
25.086
diagnostic_pcr_Ct_value_4
TaqPath
diagnostic_pcr_protocol_1
TaqPath
diagnostic_pcr_protocol_2
TaqPath
diagnostic_pcr_protocol_3
TaqPath
diagnostic_pcr_protocol_4
USA: Georgia
geo_loc_name
Homo sapiens
host
29
host_age
COVID-19
host_disease
B
host_race
male
host_sex
nasal swab
isolation_source
BA.1
lineage/clade name
Severe acute respiratory syndrome coronavirus 2
http://purl.obolibrary.org/obo/NCBITaxon_2697049
organism
baseline surveillance (random sampling)
purpose_of_sequencing
CDC Sars CoV2 Sequencing Baseline Constellation
title