SAMN28189015
External Id
Andhra University
INSDC center name
2022-09-07T00:50:10.003Z
INSDC first public
2022-09-07T00:50:10.003Z
INSDC last update
live
INSDC status
Metagenome or environmental
NCBI submission model
Metagenome.environmental.1.0
NCBI submission package
2021-12
collection_date
The samples were collected from Ganapavaram Village, Bhimavaram mandalam of West Godavari district, and Ananantavaram village of Ongole mandal, Prakasham districts of Andhra Pradesh. The samples comprised the Shrimp samples of both healthy and EHP infected shrimp ponds. The Shrimp samples were immediately sealed in sterile plastic bags. They were then brought to the laboratory in frozen condition. In the laboratory the samples were thawed, cleaned and washed. All the samples were dissected and the gut including hepatopancreas was removed. The gut content & hepatopancreas content were carefully removed into a sterile slide and transferred into the Milli Q water. The gut content samples were packed into falcon tubes and sent to Eurofins Genomics India Pvt. Ltd. for metagenome extraction and sequencing purposes. The raw sequencing data was received and deposited in NCBI.
description
India: Andhra Pradesh, West Godavari Dt, Prakasham Dt
geo_loc_name
Shrimp
host
Shrimp farm
isolate
shrimp gut metagenome
http://purl.obolibrary.org/obo/NCBITaxon_1588881
organism
Gut Content sample
tissue
Gut Content Healthy Shrimp
title