MIMS.me
BioSampleModel
MIGS/MIMS/MIMARKS.soil
BioSampleModel
2022-09-14
ENA-FIRST-PUBLIC
2022-09-14
ENA-LAST-UPDATE
SAMN30789227
External Id
pda|krishnaray
INSDC center alias
pda|krishnaray
INSDC center name
2022-09-14T01:43:55Z
INSDC first public
2022-09-14T01:43:55Z
INSDC last update
public
INSDC status
SRS15090603
SRA accession
Experimental cultivated rice-rhizosphere microbiome enriched with root-endophytic & halo-grass rhizobacteria from Sundarbans
Submitter Id
NCBI
broker name
2022-07-10
collection_date
0 to 30 cm
depth
This study was initiated to find out the absolute abundance of different bacterial communities present in an experimental plot of cultivated rice rhizosphere habitat soil at Indian Sundarbans. It was done through isolation of soil DNA from the respective site and amplicon database generation through 16S rRNA Sequencing using Illumina MiSeq platform of next generation sequencing. Comparison of this rhizosphere microbiome information of control plots with that of experimental addition of PGP root endophytic bacteria isolated from mangrove species of Indian Sundarbans and PGP bacteria from halophytic grass rhizospheres of Indian Sundarbans might result into identification of some particular bacterial community abundances which get enriched in the experimental cultivated rice rhizosphere after its experimental addition to the soil and cause plant growth promotion subsequently.
description
1 m
elev
cultivated rice rhizosphere microbiome
env_broad_scale
lowland
env_local_scale
cultivated field soil
env_medium
India: Sundarbans
geo_loc_name
Experimental cultivated rice-rhizosphere microbiome enriched with root-endophytic & halo-grass rhizobacteria from Sundarbans
isolation_source
21.47 N 88.22 E
lat_lon
rhizosphere metagenome
http://purl.obolibrary.org/obo/NCBITaxon_939928
organism
MIMS Environmental/Metagenome sample from Experimental cultivated rice-rhizosphere microbiome enriched with root-endophytic & halo-grass rhizobacteria from Sundarbans
title