Gp0564853
External Id
SAMN30728139
External Id
Environmental | Aquatic | Freshwater | Pond | Unclassified
GOLD Ecosystem Classification
DOE Joint Genome Institute
INSDC center name
2022-09-24T06:42:10.660Z
INSDC first public
2022-09-24T06:42:10.660Z
INSDC last update
SRS15211150
INSDC secondary accession
live
INSDC status
Metagenome or environmental
NCBI submission model
Metagenome.environmental.1.0
NCBI submission package
SRS15211150
SRA accession
2020-01-15
collection_date
SIP metagenome fraction of pond sample from Joint Genome Institute, Walnut Creek spiked with Pseudomonas putida & Escherichia coli bacterial isolates (for each isolate 30ng of DNA labeled at 20pct with C13 were added); replicate number 3. This fraction has a SIP fraction number 11 and DNA density of 1.7173 g/uL. This is part of a larger study to identify the limit of detection of JGI SIP metagenomics pipeline.
description
USA: California
geo_loc_name
pond water
isolation_source
37.931388 N 122.021745 W
lat_lon
pond metagenome
http://purl.obolibrary.org/obo/NCBITaxon_1851193
organism
Pond water SIP fraction microbial communities from Walnut Creek, CA, United States - JGIPond_C_20pct_30ng_3_1.7173
title