SAMN30998695
External Id
SARS-CoV-2/Human/USA/CO-CDC-LC0881582/2022
External Id
CDC-OAMD
INSDC center name
2022-09-24T00:00:00Z
INSDC first public
2022-09-24T19:08:26.183Z
INSDC last update
SRS15225921
INSDC secondary accession
live
INSDC status
SARS-CoV-2/Human/USA/CO-CDC-LC0881582/2022
Isolate
SARS-CoV-2: clinical or host-associated
NCBI submission model
SARS-CoV-2.cl.1.0
NCBI submission package
SRS15225921
SRA accession
Laboratory Corporation of America
collected_by
2022-09-06
collection_date
Nasal Swabs
collection_device
Nasal Swabs
collection_method
N1 gene
diagnostic_gene_name_1
N2 gene
diagnostic_gene_name_2
RP gene
diagnostic_gene_name_3
25.13
diagnostic_pcr_Ct_value_1
22.07
diagnostic_pcr_Ct_value_2
24.341
diagnostic_pcr_Ct_value_3
Labcorp LDT
diagnostic_pcr_protocol_1
Labcorp LDT
diagnostic_pcr_protocol_2
Labcorp LDT
diagnostic_pcr_protocol_3
USA: Colorado
geo_loc_name
Homo sapiens
host
78
host_age
COVID-19
host_disease
female
host_sex
Nasal Swabs
isolation_source
BA.5.2.1
lineage/clade name
Severe acute respiratory syndrome coronavirus 2
http://purl.obolibrary.org/obo/NCBITaxon_2697049
organism
baseline surveillance (random sampling)
purpose_of_sequencing
CDC Sars CoV2 Sequencing Baseline Constellation
title