SAMN30997476
External Id
SARS-CoV-2/Human/USA/TX-CDC-LC0881611/2022
External Id
CDC-OAMD
INSDC center name
2022-09-24T00:00:00Z
INSDC first public
2022-09-24T19:18:56.627Z
INSDC last update
SRS15227536
INSDC secondary accession
live
INSDC status
SARS-CoV-2/Human/USA/TX-CDC-LC0881611/2022
Isolate
SARS-CoV-2: clinical or host-associated
NCBI submission model
SARS-CoV-2.cl.1.0
NCBI submission package
SRS15227536
SRA accession
Laboratory Corporation of America
collected_by
2022-09-05
collection_date
Nasal Swabs
collection_device
Nasal Swabs
collection_method
N1 gene
diagnostic_gene_name_1
N2 gene
diagnostic_gene_name_2
RP gene
diagnostic_gene_name_3
29.236
diagnostic_pcr_Ct_value_1
26.537
diagnostic_pcr_Ct_value_2
32.921
diagnostic_pcr_Ct_value_3
Labcorp LDT
diagnostic_pcr_protocol_1
Labcorp LDT
diagnostic_pcr_protocol_2
Labcorp LDT
diagnostic_pcr_protocol_3
USA: Texas
geo_loc_name
Homo sapiens
host
88
host_age
COVID-19
host_disease
female
host_sex
Nasal Swabs
isolation_source
BA.5.2
lineage/clade name
Severe acute respiratory syndrome coronavirus 2
http://purl.obolibrary.org/obo/NCBITaxon_2697049
organism
baseline surveillance (random sampling)
purpose_of_sequencing
CDC Sars CoV2 Sequencing Baseline Constellation
title