SARS-CoV-2: clinical or host-associated
BioSampleModel
2022-10-07
ENA-FIRST-PUBLIC
2022-10-07
ENA-LAST-UPDATE
SAMN31166596
External Id
CDC-OAMD
INSDC center alias
CDC-OAMD
INSDC center name
2022-10-07T01:28:42Z
INSDC first public
2022-10-07T01:28:42Z
INSDC last update
public
INSDC status
SARS-CoV-2/Human/USA/CA-CDC-STM-ZDKHRSVNY/2022
Isolate
SRS15335295
SRA accession
SARS-CoV-2/Human/USA/CA-CDC-STM-ZDKHRSVNY/2022
Submitter Id
NCBI
broker name
'Helix'
collected_by
2022-09-21
collection_date
Nasal swab
collection_device
Nasal swab
collection_method
N
diagnostic_gene_name_1
ORF1ab
diagnostic_gene_name_2
S
diagnostic_gene_name_3
Helix COVID-19 and Flu Test
diagnostic_pcr_protocol_1
Helix COVID-19 and Flu Test
diagnostic_pcr_protocol_2
Helix COVID-19 and Flu Test
diagnostic_pcr_protocol_3
USA: California
geo_loc_name
Homo sapiens
host
76
host_age
COVID-19
host_disease
Not sure
host_race
male
host_sex
nasal swab
isolation_source
BA.5.2
lineage/clade name
Severe acute respiratory syndrome coronavirus 2
http://purl.obolibrary.org/obo/NCBITaxon_2697049
organism
baseline surveillance (random sampling)
purpose_of_sequencing
CDC Sars CoV2 Sequencing Baseline Constellation
title