SAMN29671407
External Id
Hebei Medical University
INSDC center name
2022-10-20T00:50:16.803Z
INSDC first public
2022-10-20T00:50:16.803Z
INSDC last update
SRS13812521
INSDC secondary accession
live
INSDC status
MIGS/MIMS/MIMARKS.human-associated
NCBI submission model
MIGS.ba
NCBI submission model
MIGS.ba.human-associated.5.0
NCBI submission package
SRS13812521
SRA accession
2022-02-01
collection_date
Pseudomonas aeruginosa is a Gram-negative pathogen that can cause human a broad range of infections in clinical settings. The bacteria also show a stronger ability of antimicrobial resistance to many antibiotics. In our study, we isolated a strain of P. aeruginosa that was termed as CYZ from the sputum of an immunocompromised patient with pneumonia. In order to investigate the characteristics of the antimicrobial resistance genes, we performed the whole genome sequencing via PacBio. We hope to compare and analyze the genomic distinctions between CYZ and other clinically isolated P. aeruginosa stains, and contribute to enrich the gene bank of the genome of P. aeruginosa.
description
nosocomial environment
env_broad_scale
immunocompromised patient with pneumonia
env_local_scale
human sputum
env_medium
China:Shijiazhuang
geo_loc_name
Homo sapiens
host
sputum
isol_growth_condt
38 N 114 E
lat_lon
5807
num_replicons
Pseudomonas aeruginosa
http://purl.obolibrary.org/obo/NCBITaxon_287
organism
CYZ
strain
MIGS Cultured Bacterial/Archaeal sample from Pseudomonas aeruginosa
title