SAMN25335935
External Id
United States Department of Agriculture
INSDC center name
2022-10-27T00:00:00Z
INSDC first public
2022-10-27T17:47:08.891Z
INSDC last update
SRS11789608
INSDC secondary accession
live
INSDC status
MIMARKS.specimen
NCBI submission model
MIGS/MIMS/MIMARKS.host-associated
NCBI submission model
MIMARKS.specimen.host-associated.5.0
NCBI submission package
SRS11789608
SRA accession
2019
collection_date
Keywords: GSC:MIxS;MIMARKS:5.0
description
The V3-V4 region of the bacterial rRNA gene was amplified from total DNA using universal primer pair (5′-CCTACGGGDGGCWGCA-3′ and 5′-GGACTACHVGGGTMTCTAATC-3′) Sequencing was performed at the University of Arizona Genetics Core on a MiSeq following the manufacturer s guidelines.
design_description
Southwestern US
env_broad_scale
Digestive Tract
env_local_scale
Ileum
env_medium
059-7-N52-IL_S32_L001_R1_001.fastq
filename
059-7-N52-IL_S32_L001_R2_001.fastq
filename2
fastq
filetype
USA: Arizona
geo_loc_name
Apis mellifera worker
host
Illumina MiSeq
instrument_model
Apis mellifera worker digestive tract
isol_growth_condt
Apis mellifera ileum
isolate
32.16 N 110.56 W
lat_lon
paired
library_layout
RANDOM
library_selection
METAGENOMIC
library_source
AMPLICON
library_strategy
Apis mellifera
http://purl.obolibrary.org/obo/NCBITaxon_7460
organism
ILLUMINA
platform
059.7.N52.IL
title