SAMN20284500
External Id
USDA APHIS
INSDC center name
2022-10-31T00:51:05.573Z
INSDC first public
2022-10-31T00:51:05.573Z
INSDC last update
live
INSDC status
Metagenome or environmental
NCBI submission model
Metagenome.environmental.1.0
NCBI submission package
2017
collection_date
We propose the use of high-throughput sequencing (HTS) as part of the routine quarantine diagnostics. We evaluated the impact of sequencing depth needed for the HTS-based identification of sugarcane DNA and RNA viruses across two different growing seasons.
description
USA: Maryland
geo_loc_name
Sugarcane
host
39.0993 N 76.8483 W
lat_lon
plant metagenome
http://purl.obolibrary.org/obo/NCBITaxon_1297885
organism
Application of HTS for the detection of sugarcane viruses
title