WK89-3287_BioSample
External Id
SAMN31791830
External Id
UNC Charlotte Environmental Monitoring Laboratory
INSDC center name
2022-11-18T00:00:00Z
INSDC first public
2022-11-18T16:40:28.530Z
INSDC last update
SRS15803199
INSDC secondary accession
live
INSDC status
SARS-CoV-2: wastewater surveillance
NCBI submission model
SARS-CoV-2.wwsurv.1.0
NCBI submission package
SRS15803199
SRA accession
North Carolina Department of Health and Human Services
collected_by
2022-09-21
collection_date
WK89-3287
collection_site_id
08:35
collection_time
40
collection_volume
membrane filtration with acidification and mgcl2
concentration_method
bcov vaccine
extraction_control
nuclisens manual magnetic bead extraction kit
extraction_method
USA: North Carolina
geo_loc_name
wastewater
isolation_source
wastewater metagenome
http://purl.obolibrary.org/obo/NCBITaxon_527639
organism
wastewater metagenome
organism
Wastewater sequencing of NC Wastewater Monitoring Network samples
project_name
public health surveillance community-level
purpose_of_ww_sampling
public health surveillance for the NC Wastewater Monitoring Network
purpose_of_ww_sequencing
WK89-3287
sample_name
laurinburg
sample_title
University of North Carolina at Charlotte
sequenced_by
10-07-22-V2 BioSample
title
pepper mild mottle virus
ww_endog_control_1
racki et al. 2014; haramoto et al 201
ww_endog_control_1_protocol
3.11
ww_flow
35.0
ww_industrial_effluent_percent
7.0
ww_ph
15527
ww_population
census blocks clipped to wastewater service area polygon
ww_population_source
yes
ww_pre_treatment
24
ww_sample_duration
raw wastewater
ww_sample_matrix
wastewater treatment plant
ww_sample_site
composite
ww_sample_type
NC
ww_surv_jurisdiction
NCWW11628
ww_surv_system_sample_id
SARS-CoV-2
ww_surv_target_1
12250
ww_surv_target_1_conc
copies/L
ww_surv_target_1_conc_unit
N gene (N1)
ww_surv_target_1_gene
yes
ww_surv_target_1_known_present
lu et al. us cdc real-time reverse transcription pcr panel for detection of severe acutre respirtaory syndrome coronavirus 2- volume 26, number 8 - august 2020 - emerging infectious diseases journal - cdc
ww_surv_target_1_protocol
SARS-CoV-2
ww_surv_target_2
34750
ww_surv_target_2_conc
copies/L
ww_surv_target_2_conc_unit
N gene (N2)
ww_surv_target_2_gene
yes
ww_surv_target_2_known_present
4
ww_temperature