MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2005-09-14T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22108653
External Id
0.975256496
FEV1FVC
1.654897623
FEV1FVCZ
2.019999981
FEV1_baseline
82.99728438
FEVpcpred
2.071249962
FVC
-1.893955417
FVCZ
76.00540837
FVCpcpred
8809
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:28Z
INSDC first public
2022-11-29T01:24:28Z
INSDC last update
public
INSDC status
38587
RawReads_ASVpipeline
SRS10483903
SRA accession
BSP0544
Submitter Id
yes
acut_exac12m
Adherent
adherence
no
adm
yes
all_3
no
antibiotic12m
1
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0544
barcode
806rcbc319
barcode_806R
NCBI
broker name
2018-10-16
collection_date
yes
cotrimoxazole
no
cough_enrl
2007-06-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
2018-10-16T00:00:00
endfollowup
['NA', '2018-04-24T00:00:00']
endtreatdate
2017-05
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.301141293
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
13
host_age
18.463089
host_body_mass_index
HIV-associated chronic lung disease
host_disease
82.99728438
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B1076
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
TGCGCTTGGATA
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-10-16T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R1
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:28:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.235210884
templateDNA_16SqPCR
19.60058005
templateDNA_16SqPCR_Cq
331608.01
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2018-10-16T00:00:00
visit_date
7
visittotno
45.8
weight
G03
well
-0.15326171
zbmiuk
0.25815332
zhauk
-0.000794482
zwauk
no
zymo_DNA