MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1999-01-07T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22250781
External Id
0.618618616
FEV1FVC
-3.262893418
FEV1FVCZ
1.029999971
FEV1_baseline
36.24614039
FEVpcpred
1.664999962
FVC
-3.91796318
FVCZ
51.7531927
FVCpcpred
18580
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:45Z
INSDC first public
2022-11-29T01:24:45Z
INSDC last update
public
INSDC status
33356
RawReads_ASVpipeline
SRS10620444
SRA accession
BSP0358
Submitter Id
Abnormal HR
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
12.21
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0358
barcode
806rcbc73
barcode_806R
NCBI
broker name
2018-03-23
collection_date
no
cotrimoxazole
no
cough_enrl
2011-03-25T00:00:00
dateart
2009-06-12T00:00:00
datehiv
5.62
duryart
2018-03-23T00:00:00
endfollowup
['NA', '2017-10-06T00:00:00']
endtreatdate
2016-11
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-4.733560667
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
19.2
host_age
15.638572
host_body_mass_index
HIV-associated chronic lung disease
host_disease
36.24614039
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1033
host_subject_id
human respiratory
host_tissue_sampled
GACGGAACCCAT
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-03-23T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R3
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
08:19:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
0.169699621
templateDNA_16SqPCR
20.26193777
templateDNA_16SqPCR_Cq
239248.0878
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2018-03-23T00:00:00
visit_date
7
visittotno
3.1003706
vllog
1260
vload
36.8
weight
B09
well
-3.5646422
zbmiuk
-3.4252691
zhauk
-5.8649592
zwauk
no
zymo_DNA