MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1998-11-01T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248065
External Id
0.835460661
FEV1FVC
-0.721698624
FEV1FVCZ
2.25
FEV1_baseline
73.69290009
FEVpcpred
2.69312501
FVC
-1.807299573
FVCZ
77.55486797
FVCpcpred
19694
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:49Z
INSDC first public
2022-11-29T01:24:49Z
INSDC last update
public
INSDC status
39889
RawReads_ASVpipeline
SRS10620638
SRA accession
BSP0080
Submitter Id
Not abnormal
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
no
acut_exac12m
Not Adherent
adherence
no
adm
13.83
ageyart
no
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
no
attendschool
BSP0080
barcode
806rcbc23
barcode_806R
NCBI
broker name
979
cd4
2017-05-12
collection_date
yes
cotrimoxazole
no
cough_enrl
2012-09-01T00:00:00
dateart
2012-08-15T00:00:00
datehiv
42884
dow
COLEL LEVKOMZO LQ.
drug_usage
4.69
duryart
2017-05-29T00:00:00
endfollowup
['NA', 'NA']
endtreatdate
2017-05
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-2.0138803
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
18.5
host_age
16.850599
host_body_mass_index
HIV-associated chronic lung disease
host_disease
73.69290009
host_height
yes
host_hiv_stat
male
host_sex
B1070
host_subject_id
human respiratory
host_tissue_sampled
GGATGGTGTTGC
index_sequence
sputum
isolation_source
17.82 S 31.04 E
lat_lon
yes
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COLEL LEVKOMZO LQ.
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:03:00
sp05time
withdrawal
study_complt_stat
no
tbtreat
0.026858157
templateDNA_16SqPCR
22.44
templateDNA_16SqPCR_Cq
37865.50948
templateDNA_16SqPCR_copies
human sputum metagenome
title
Refused
treatstopreason
Placebo
trial_arm
Week 0
visit
no
visit012
no
visit018
no
visit1218
2017-05-10T00:00:00
visit_date
0
visittotno
2.4409091
vllog
276
vload
42.6
weight
H02
well
-2.4140072
zbmiuk
-2.6165962
zhauk
-4.0023499
zwauk
no
zymo_DNA