MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2003-03-16T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246711
External Id
0.974720318
FEV1FVC
1.337297013
FEV1FVCZ
1.470000029
FEV1_baseline
58.9797632
FEVpcpred
1.508124948
FVC
-3.597388224
FVCZ
54.6901412
FVCpcpred
11498
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:33Z
INSDC first public
2022-11-29T01:24:33Z
INSDC last update
public
INSDC status
43411
RawReads_ASVpipeline
SRS10548155
SRA accession
BSP0676
Submitter Id
AT
WRrepeats
AT
WRrepeats_WP
yes
acut_exac12m
Adherent
adherence
no
adm
10.72
ageyart
no
all_3
no
antibiotic12m
1
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0676
barcode
806rcbc47
barcode_806R
NCBI
broker name
135
cd4
2019-05-28
collection_date
yes
cotrimoxazole
no
cough_enrl
2013-12-03T00:00:00
dateart
2013-11-21T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
4.56
duryart
2019-05-28T00:00:00
endfollowup
['NA', '2019-05-28T00:00:00']
endtreatdate
2018-06
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-3.068532663
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
16.2
host_age
20.594965
host_body_mass_index
HIV-associated chronic lung disease
host_disease
58.9797632
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B1210
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
ACGCCACGAATG
index_sequence
sputum
isolation_source
12 mths
lastvisit
2019-05-28T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
yes
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R1
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:00:00
sp05time
study ended
study_complt_stat
yes
tbtreat
0.391004404
templateDNA_16SqPCR
18.95375507
templateDNA_16SqPCR_Cq
551250.82
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 48
visit
yes
visit012
no
visit018
no
visit1218
2019-05-28T00:00:00
visit_date
5
visittotno
5.0755467
vllog
119000
vload
48.4
weight
H05
well
0.026541114
zbmiuk
-1.6478138
zhauk
-1.0309905
zwauk
no
zymo_DNA