MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2000-08-10T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248091
External Id
0.999665879
FEV1FVC
1.897305764
FEV1FVCZ
1.870000005
FEV1_baseline
75.41663731
FEVpcpred
1.870625019
FVC
-2.483891377
FVCZ
68.01542628
FVCpcpred
13301
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:49Z
INSDC first public
2022-11-29T01:24:49Z
INSDC last update
public
INSDC status
28108
RawReads_ASVpipeline
SRS10620645
SRA accession
BSP0269
Submitter Id
Not abnormal
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
yes
acut_exac12m
Adherent
adherence
no
adm
9.35
ageyart
yes
all_3
yes
antibiotic12m
2
any3_reasons
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
yes
attendschool
BSP0269
barcode
806rcbc307
barcode_806R
NCBI
broker name
2018-01-16
collection_date
yes
cotrimoxazole
no
cough_enrl
2009-12-15T00:00:00
dateart
2009-11-01T00:00:00
datehiv
6.71
duryart
2018-01-16T00:00:00
endfollowup
['NA', '2017-08-01T00:00:00']
endtreatdate
2016-08
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.868525864
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
17.4
host_age
19.710897
host_body_mass_index
HIV-associated chronic lung disease
host_disease
75.41663731
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B1010
host_subject_id
human respiratory
host_tissue_sampled
AGCGATGCCTTA
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-01-16T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['1.5', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:05:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
0.012400776
templateDNA_16SqPCR
23.56
templateDNA_16SqPCR_Cq
17483.02009
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2018-01-16T00:00:00
visit_date
7
visittotno
45.6
weight
C02
well
-0.52105212
zbmiuk
-1.8878393
zhauk
-1.6996689
zwauk
no
zymo_DNA