MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2003-05-27T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246908
External Id
0.905997236
FEV1FVC
0.012880458
FEV1FVCZ
2.03
FEV1_baseline
82.22029962
FEVpcpred
2.240624905
FVC
-1.399215822
FVCZ
81.95583082
FVCpcpred
13946
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:37Z
INSDC first public
2022-11-29T01:24:37Z
INSDC last update
public
INSDC status
37389
RawReads_ASVpipeline
SRS10548896
SRA accession
BYC12YT3
Submitter Id
no
acut_exac12m
Not Adherent
adherence
no
adm
10.91
ageyart
no
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BYC12YT3
barcode
806rcbc181
barcode_806R
NCBI
broker name
510
cd4
2018-03-26
collection_date
yes
cotrimoxazole
no
cough_enrl
2014-04-25T00:00:00
dateart
2014-03-28T00:00:00
datehiv
43269
dow
3.92
duryart
2018-06-18T00:00:00
endfollowup
['2018-06-18T00:00:00', '2018-06-18T00:00:00']
endtreatdate
2018-03
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-1.3597343
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
14.8
host_age
16.781919
host_body_mass_index
HIV-associated chronic lung disease
host_disease
82.22029962
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B3084
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
TCAAGCTCAAGC
index_sequence
sputum
isolation_source
2 wks
lastvisit
2018-04-09T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
yes
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R1
run_processing_batch
stored in primestore
samp_mat_process
['5', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:30:00
sp05time
withdrawal
study_complt_stat
no
tbtreat
0.020509425
templateDNA_16SqPCR
23.2872256
templateDNA_16SqPCR_Cq
28914.86
templateDNA_16SqPCR_copies
human sputum metagenome
title
Moved away
treatstopreason
Placebo
trial_arm
Week 0
visit
no
visit012
no
visit018
no
visit1218
2018-03-17T00:00:00
visit_date
1
visittotno
5.6294098
vllog
426000
vload
39.8
weight
F10
well
-1.4621361
zbmiuk
-1.2557911
zhauk
-1.9816538
zwauk
no
zymo_DNA