MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1998-10-30T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246948
External Id
0.697109292
FEV1FVC
-2.466132661
FEV1FVCZ
2.08
FEV1_baseline
71.31002208
FEVpcpred
2.983750105
FVC
-0.796049348
FVCZ
90.07016746
FVCpcpred
16655
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:37Z
INSDC first public
2022-11-29T01:24:37Z
INSDC last update
public
INSDC status
40099
RawReads_ASVpipeline
SRS10548914
SRA accession
BYE10ET3
Submitter Id
no
acut_exac12m
Adherent
adherence
no
adm
6.03
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BYE10ET3
barcode
806rcbc230
barcode_806R
NCBI
broker name
2018-05-23
collection_date
yes
cotrimoxazole
no
cough_enrl
2004-11-08T00:00:00
dateart
12.16
duryart
2018-05-23T00:00:00
endfollowup
['NA', '2018-12-06T00:00:00']
endtreatdate
2017-01
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-2.213587108
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
19.5
host_age
20.811655
host_body_mass_index
HIV-associated chronic lung disease
host_disease
71.31002208
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B3008
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
CCTAATGGAACC
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-05-23T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
0
nadm
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R1
run_processing_batch
stored in primestore
samp_mat_process
['3', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:00:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.076399796
templateDNA_16SqPCR
21.21705611
templateDNA_16SqPCR_Cq
107710.94
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2018-05-23T00:00:00
visit_date
7
visittotno
50
weight
F04
well
-0.41262236
zbmiuk
-3.1977599
zhauk
-2.7542248
zwauk
no
zymo_DNA