MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2001-10-23T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248123
External Id
0.91831293
FEV1FVC
0.34920097
FEV1FVCZ
2.150000095
FEV1_baseline
74.79609354
FEVpcpred
2.3412499430000002
FVC
-2.104278926
FVCZ
72.826115
FVCpcpred
22529
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:49Z
INSDC first public
2022-11-29T01:24:49Z
INSDC last update
public
INSDC status
42426
RawReads_ASVpipeline
SRS10620634
SRA accession
BSP0523
Submitter Id
Not abnormal
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
6.4
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
yes
attendschool
BSP0523
barcode
806rcbc207
barcode_806R
NCBI
broker name
2018-09-06
collection_date
yes
cotrimoxazole
yes
cough_enrl
2008-03-19T00:00:00
dateart
2007-03-05T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
9.09
duryart
2018-09-06T00:00:00
endfollowup
['NA', '2018-03-22T00:00:00']
endtreatdate
2017-04
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.914948665
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
16.8
host_age
20.075237
host_body_mass_index
HIV-associated chronic lung disease
host_disease
74.79609354
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B1067
host_subject_id
human respiratory
host_tissue_sampled
GAGGCCATCAGT
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-09-06T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['1.5', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:10:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
0.005584377
templateDNA_16SqPCR
24.71
templateDNA_16SqPCR_Cq
7873.037107
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2018-09-06T00:00:00
visit_date
7
visittotno
53.6
weight
G01
well
-0.28450677
zbmiuk
-0.015605279
zhauk
-0.40126944
zwauk
no
zymo_DNA