L
BRrepeats
MIGS/MIMS/MIMARKS.host-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2000-08-02T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248937
External Id
0.8275862
FEV1FVC
-1.163002793
FEV1FVCZ
2.099999905
FEV1_baseline
81.19774918
FEVpcpred
2.537499905
FVC
-0.904351605
FVCZ
88.08727314
FVCpcpred
18087
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:38Z
INSDC first public
2022-11-29T01:24:38Z
INSDC last update
public
INSDC status
34425
RawReads_ASVpipeline
SRS10550309
SRA accession
BSP0415
Submitter Id
Not abnormal
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
7.76
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0415
barcode
806rcbc216
barcode_806R
NCBI
broker name
475
cd4
2018-06-01
collection_date
yes
cotrimoxazole
no
cough_enrl
2008-05-05T00:00:00
dateart
2002-06-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
9.15
duryart
2018-11-16T00:00:00
endfollowup
['NA', '2018-06-01T00:00:00']
endtreatdate
2017-06
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.436251995
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
17.8
host_age
22.060354
host_body_mass_index
HIV-associated chronic lung disease
host_disease
81.19774918
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B1091
host_subject_id
human respiratory
host_tissue_sampled
CCTCTACCTACG
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-11-16T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
08:52:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.000550388
templateDNA_16SqPCR
28.06
templateDNA_16SqPCR_Cq
775.9543692
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 48
visit
yes
visit012
yes
visit018
yes
visit1218
2018-06-01T00:00:00
visit_date
7
visittotno
1.5910646
vllog
39
vload
53
weight
H02
well
0.3302027
zbmiuk
-1.4155258
zhauk
-0.58212441
zwauk
no
zymo_DNA