MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2002-10-24T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248111
External Id
0.804538467
FEV1FVC
-1.2475954
FEV1FVCZ
1.950000048
FEV1_baseline
74.59972519
FEVpcpred
2.423749924
FVC
-1.423756568
FVCZ
82.34557243
FVCpcpred
11268
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:50Z
INSDC first public
2022-11-29T01:24:50Z
INSDC last update
public
INSDC status
24217
RawReads_ASVpipeline
SRS10620678
SRA accession
BSP0397
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
11.56
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0397
barcode
806rcbc265
barcode_806R
NCBI
broker name
782
cd4
2018-05-17
collection_date
no
cotrimoxazole
no
cough_enrl
2014-05-15T00:00:00
dateart
2013-06-15T00:00:00
datehiv
3.09
duryart
2018-11-01T00:00:00
endfollowup
['NA', '2018-05-17T00:00:00']
endtreatdate
2017-06
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.873746758
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
15.5
host_age
16.784668
host_body_mass_index
HIV-associated chronic lung disease
host_disease
74.59972519
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1084
host_subject_id
human respiratory
host_tissue_sampled
TCCAGGCTTAAT
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-11-01T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['1.5', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:50:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.411959852
templateDNA_16SqPCR
18.34586457
templateDNA_16SqPCR_Cq
580794.5013
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 48
visit
yes
visit012
yes
visit018
yes
visit1218
2018-05-17T00:00:00
visit_date
7
visittotno
1.9084851
vllog
81
vload
39.6
weight
A09
well
-1.5423362
zbmiuk
-2.3081455
zhauk
-2.4122295
zwauk
no
zymo_DNA