MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2003-08-01T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246924
External Id
0.677509814
FEV1FVC
-2.879801112
FEV1FVCZ
1.51
FEV1_baseline
64.69745065
FEVpcpred
2.22874999
FVC
-1.032845707
FVCZ
86.60659607
FVCpcpred
16645
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:38Z
INSDC first public
2022-11-29T01:24:38Z
INSDC last update
public
INSDC status
48503
RawReads_ASVpipeline
SRS10548934
SRA accession
BYD10YT3
Submitter Id
no
acut_exac12m
Adherent
adherence
no
adm
8.62
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BYD10YT3
barcode
806rcbc25
barcode_806R
NCBI
broker name
458
cd4
2018-07-16
collection_date
yes
cotrimoxazole
no
cough_enrl
2012-03-15T00:00:00
dateart
2012-03-15T00:00:00
datehiv
5.42
duryart
2019-01-10T00:00:00
endfollowup
['NA', '2018-07-16T00:00:00']
endtreatdate
2017-08
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-2.656049558
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
14.9
host_age
18.173727
host_body_mass_index
HIV-associated chronic lung disease
host_disease
64.69745065
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B3036
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
TAGGATTGCTCG
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-01-10T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R1
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:20:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
0.043356649
templateDNA_16SqPCR
22.14424885
templateDNA_16SqPCR_Cq
61125.63
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 48
visit
yes
visit012
yes
visit018
yes
visit1218
2018-07-16T00:00:00
visit_date
7
visittotno
0
vllog
0
vload
41
weight
B03
well
-0.76300764
zbmiuk
-1.9070736
zhauk
-1.8297726
zwauk
no
zymo_DNA