MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1998-10-06T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22250743
External Id
0.856466101
FEV1FVC
-0.67511375
FEV1FVCZ
2.26
FEV1_baseline
84.25532314
FEVpcpred
2.638750076
FVC
-0.920270363
FVCZ
87.84188787
FVCpcpred
16606
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:45Z
INSDC first public
2022-11-29T01:24:45Z
INSDC last update
public
INSDC status
31504
RawReads_ASVpipeline
SRS10620467
SRA accession
BSP0090
Submitter Id
Not abnormal
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
yes
acut_exac12m
Not Adherent
adherence
no
adm
11.94
ageyart
no
all_3
no
antibiotic12m
1
any3_reasons
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
no
attendschool
BSP0090
barcode
806rcbc10
barcode_806R
NCBI
broker name
568
cd4
2017-05-30
collection_date
yes
cotrimoxazole
no
cough_enrl
2010-09-15T00:00:00
dateart
2010-06-15T00:00:00
datehiv
42969
dow
COTRIMOXAZOLE
drug_usage
6.7
duryart
2017-08-22T00:00:00
endfollowup
['NA', 'NA']
endtreatdate
2017-05
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.2051321
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
18.6
host_age
23.542454
host_body_mass_index
HIV-associated chronic lung disease
host_disease
84.25532314
host_height
yes
host_hiv_stat
female
host_sex
B1078
host_subject_id
human respiratory
host_tissue_sampled
GTACATACCGGT
index_sequence
sputum
isolation_source
3 mths
lastvisit
2017-08-22T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
yes
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R3
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
11:00:00
sp05time
withdrawal
study_complt_stat
no
tbtreat
0.134306254
templateDNA_16SqPCR
20.47529488
templateDNA_16SqPCR_Cq
189349.3592
templateDNA_16SqPCR_copies
human sputum metagenome
title
Moved away
treatstopreason
Placebo
trial_arm
Week 0
visit
no
visit012
no
visit018
no
visit1218
2017-05-23T00:00:00
visit_date
2
visittotno
3.6344774
vllog
4310
vload
58.4
weight
C01
well
0.72140378
zbmiuk
-1.0134447
zhauk
0.071179189
zwauk
no
zymo_DNA