MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2006-07-07T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22108570
External Id
0.740740728
FEV1FVC
-2.265806401
FEV1FVCZ
1
FEV1_baseline
70.02446869
FEVpcpred
1.350000024
FVC
-1.198299755
FVCZ
84.83490839
FVCpcpred
21446
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:31Z
INSDC first public
2022-11-29T01:24:31Z
INSDC last update
public
INSDC status
50053
RawReads_ASVpipeline
SRS10483975
SRA accession
BSP0001
Submitter Id
no
acut_exac12m
Adherent
adherence
no
adm
4.94
ageyart
yes
all_3
yes
antibiotic12m
1
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0001
barcode
806rcbc90
barcode_806R
NCBI
broker name
524
cd4
2016-06-15
collection_date
yes
cotrimoxazole
no
cough_enrl
2011-06-15T00:00:00
dateart
2008-09-15T00:00:00
datehiv
5
duryart
2017-11-01T00:00:00
endfollowup
['2017-05-17T00:00:00', '2017-05-17T00:00:00']
endtreatdate
2016-06
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-2.2627618
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
9.9
host_age
19.64497
host_body_mass_index
HIV-associated chronic lung disease
host_disease
70.02446869
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B1001
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
CAGCGGTGACAT
index_sequence
sputum
isolation_source
18 mths
lastvisit
2017-11-01T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R1
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:45:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.075091441
templateDNA_16SqPCR
21.34744967
templateDNA_16SqPCR_Cq
105866.37
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 0
visit
yes
visit012
yes
visit018
yes
visit1218
2016-06-07T00:00:00
visit_date
7
visittotno
1.7853298
vllog
61
vload
33.2
weight
C11
well
1.1011252
zbmiuk
-1.2791704
zhauk
0.18488415
zwauk
no
zymo_DNA