MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1997-12-11T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22250791
External Id
0.845854223
FEV1FVC
-0.734852922
FEV1FVCZ
1.899999976
FEV1_baseline
72.35897655
FEVpcpred
2.246249914
FVC
-1.833514699
FVCZ
75.92386664
FVCpcpred
18094
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:46Z
INSDC first public
2022-11-29T01:24:46Z
INSDC last update
public
INSDC status
31736
RawReads_ASVpipeline
SRS10620483
SRA accession
BSP0419
Submitter Id
Not abnormal
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
yes
acut_exac12m
Adherent
adherence
no
adm
9.81
ageyart
no
all_3
no
antibiotic12m
1
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
no
attendschool
BSP0419
barcode
806rcbc300
barcode_806R
NCBI
broker name
379
cd4
2018-06-13
collection_date
yes
cotrimoxazole
no
cough_enrl
2007-10-04T00:00:00
dateart
2007-09-24T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
9.77
duryart
2018-09-11T00:00:00
endfollowup
['NA', '2018-06-13T00:00:00']
endtreatdate
2017-07
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-2.088404181
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
20.5
host_age
24.851048
host_body_mass_index
HIV-associated chronic lung disease
host_disease
72.35897655
host_height
yes
host_hiv_stat
female
host_sex
B1094
host_subject_id
human respiratory
host_tissue_sampled
TCTGCAGTTGGA
index_sequence
sputum
isolation_source
15 mths
lastvisit
2018-09-11T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
yes
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R3
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
08:51:00
sp05time
LTFU
study_complt_stat
yes
tbtreat
0.002964855
templateDNA_16SqPCR
25.97185815
templateDNA_16SqPCR_Cq
4179.949122
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 48
visit
yes
visit012
no
visit018
no
visit1218
2018-06-13T00:00:00
visit_date
6
visittotno
3.0492179
vllog
1120
vload
60.4
weight
D01
well
0.95535773
zbmiuk
-1.283739
zhauk
0.26614863
zwauk
no
zymo_DNA