MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2005-08-12T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246676
External Id
0.910247382
FEV1FVC
0.467186523
FEV1FVCZ
1.610000014
FEV1_baseline
81.46396617
FEVpcpred
1.768749952
FVC
-1.693570999
FVCZ
79.10286735
FVCpcpred
13182
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:34Z
INSDC first public
2022-11-29T01:24:34Z
INSDC last update
public
INSDC status
38800
RawReads_ASVpipeline
SRS10548201
SRA accession
BSP0568
Submitter Id
no
acut_exac12m
Adherent
adherence
no
adm
10.12
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0568
barcode
806rcbc275
barcode_806R
NCBI
broker name
2018-12-07
collection_date
yes
cotrimoxazole
no
cough_enrl
2015-09-25T00:00:00
dateart
2007-06-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
1.79
duryart
2018-12-07T00:00:00
endfollowup
['NA', '2018-06-12T00:00:00']
endtreatdate
2017-07
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.390805446
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
13.3
host_age
15.924166
host_body_mass_index
HIV-associated chronic lung disease
host_disease
81.46396617
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1093
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
TCGAGTTTGGTT
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-12-07T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R1
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:09:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.011442628
templateDNA_16SqPCR
24.05450828
templateDNA_16SqPCR_Cq
16132.19
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2018-12-07T00:00:00
visit_date
7
visittotno
32.2
weight
C10
well
-1.3119576
zbmiuk
-1.8618885
zhauk
-1.9728284
zwauk
no
zymo_DNA