MIGS/MIMS/MIMARKS.host-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2009-08-06T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248939
External Id
0.96592012
FEV1FVC
1.010393568
FEV1FVCZ
0.62
FEV1_baseline
62.85519817
FEVpcpred
0.641875029
FVC
-3.209520323
FVCZ
59.24962514
FVCpcpred
17909
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:39Z
INSDC first public
2022-11-29T01:24:39Z
INSDC last update
public
INSDC status
42515
RawReads_ASVpipeline
SRS10550320
SRA accession
BSP0432
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
7.03
ageyart
no
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0432
barcode
806rcbc304
barcode_806R
NCBI
broker name
176
cd4
2018-06-27
collection_date
yes
cotrimoxazole
no
cough_enrl
2016-08-15T00:00:00
dateart
2016-08-09T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
1.86
duryart
2019-05-30T00:00:00
endfollowup
['2019-05-29T00:00:00', '2019-05-29T00:00:00']
endtreatdate
2018-06
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-2.8286173
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
8.8
host_age
16.785648
host_body_mass_index
HIV-associated chronic lung disease
host_disease
62.85519817
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1211
host_subject_id
human respiratory
host_tissue_sampled
AGCTATCCACGA
index_sequence
sputum
isolation_source
12 mths
lastvisit
2019-05-30T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
yes
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
08:31:00
sp05time
study ended
study_complt_stat
no
tbtreat
0.014337415
templateDNA_16SqPCR
23.35
templateDNA_16SqPCR_Cq
20213.35765
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 0
visit
yes
visit012
no
visit018
no
visit1218
2018-06-21T00:00:00
visit_date
5
visittotno
5.6454225
vllog
442000
vload
20.2
weight
H01
well
0.44420144
zbmiuk
-3.9921134
zhauk
-2.56812
zwauk
no
zymo_DNA