MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1998-10-21T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249107
External Id
0.908845952
FEV1FVC
0.142206171
FEV1FVCZ
2.53
FEV1_baseline
102.099584
FEVpcpred
2.7837500569999998
FVC
0.057435877
FVCZ
100.7684372
FVCpcpred
16894
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:44Z
INSDC first public
2022-11-29T01:24:44Z
INSDC last update
public
INSDC status
33056
RawReads_ASVpipeline
SRS10550520
SRA accession
BSP0145
Submitter Id
no
adm
16.69
ageyart
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0145
barcode
806rcbc152
barcode_806R
NCBI
broker name
709
cd4
2017-08-17
collection_date
yes
cotrimoxazole
2015-06-29T00:00:00
dateart
2011-06-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
2.14
duryart
['NA', 'not applicable']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
0.1630054
fev1z
Zimbabwe: Harare
geo_loc_name
comparison group
group
Homo sapiens
host
18.8
host_age
22.943663
host_body_mass_index
No HIV-associated chronic lung disease
host_disease
102.099584
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
C121
host_subject_id
human respiratory
host_tissue_sampled
ATGATGACCCGT
index_sequence
sputum
isolation_source
17.82 S 31.04 E
lat_lon
yes
one_visit
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:55:00
sp05time
no
tbtreat
0.00223144
templateDNA_16SqPCR
26.08498822
templateDNA_16SqPCR_Cq
3145.957398
templateDNA_16SqPCR_copies
human sputum metagenome
title
Week 0
visit
2017-08-17T00:00:00
visit_date
62
vload
52.8
weight
A07
well
0.51984102
zbmiuk
-1.9751315
zhauk
-0.66620302
zwauk
no
zymo_DNA