MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1999-01-01T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22108628
External Id
0.731759259
FEV1FVC
-1.930488014
FEV1FVCZ
2.150000095
FEV1_baseline
57.42755709
FEVpcpred
2.938124895
FVC
-2.610187061
FVCZ
67.67131707
FVCpcpred
16252
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:28Z
INSDC first public
2022-11-29T01:24:28Z
INSDC last update
public
INSDC status
40882
RawReads_ASVpipeline
SRS10483898
SRA accession
BSP0341
Submitter Id
yes
acut_exac12m
Not Adherent
adherence
no
adm
15.3
ageyart
yes
all_3
no
antibiotic12m
1
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
no
attendschool
BSP0341
barcode
806rcbc138
barcode_806R
NCBI
broker name
705
cd4
2018-03-12
collection_date
yes
cotrimoxazole
no
cough_enrl
2014-04-22T00:00:00
dateart
2007-05-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
2.97
duryart
2018-08-27T00:00:00
endfollowup
['NA', '2018-03-12T00:00:00']
endtreatdate
2017-04
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-3.234246903
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
19.1
host_age
19.68733
host_body_mass_index
HIV-associated chronic lung disease
host_disease
57.42755709
host_height
yes
host_hiv_stat
male
host_sex
B1065
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
CTCTACCTCTAC
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-08-27T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R1
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:11:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.881013225
templateDNA_16SqPCR
17.64475213
templateDNA_16SqPCR_Cq
1242081.32
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 48
visit
yes
visit012
yes
visit018
yes
visit1218
2018-03-12T00:00:00
visit_date
7
visittotno
2.4756713
vllog
299
vload
59.4
weight
C05
well
-0.86881286
zbmiuk
-0.51466811
zhauk
-1.1506939
zwauk
no
zymo_DNA