MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2010-01-10T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246647
External Id
0.953191473
FEV1FVC
0.89201349
FEV1FVCZ
0.7
FEV1_baseline
63.34201888
FEVpcpred
0.734375
FVC
-3.123773403
FVCZ
59.93948176
FVCpcpred
10380
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:33Z
INSDC first public
2022-11-29T01:24:33Z
INSDC last update
public
INSDC status
46100
RawReads_ASVpipeline
SRS10548156
SRA accession
BSP0439
Submitter Id
no
acut_exac12m
Not Adherent
adherence
no
adm
2.89
ageyart
no
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0439
barcode
806rcbc182
barcode_806R
NCBI
broker name
419
cd4
2018-07-03
collection_date
yes
cotrimoxazole
no
cough_enrl
2012-11-30T00:00:00
dateart
2012-11-15T00:00:00
datehiv
43284
dow
5.59
duryart
2018-07-03T00:00:00
endfollowup
['2018-07-03T00:00:00', '2018-07-03T00:00:00']
endtreatdate
2018-07
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-2.7446094
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
8.4
host_age
15.997108
host_body_mass_index
HIV-associated chronic lung disease
host_disease
63.34201888
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1214
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
TAATCCACAGCG
index_sequence
sputum
isolation_source
17.82 S 31.04 E
lat_lon
yes
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R1
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:05:00
sp05time
withdrawal
study_complt_stat
no
tbtreat
0.06573065
templateDNA_16SqPCR
21.53952566
templateDNA_16SqPCR_Cq
92669.23
templateDNA_16SqPCR_copies
human sputum metagenome
title
Refused
treatstopreason
Azithromycin
trial_arm
Week 0
visit
no
visit012
no
visit018
no
visit1218
2018-06-29T00:00:00
visit_date
0
visittotno
5.6785183
vllog
477000
vload
21.6
weight
G10
well
0.076922283
zbmiuk
-2.5439806
zhauk
-1.6541936
zwauk
no
zymo_DNA