MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2006-07-07T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22108609
External Id
0.740429114
FEV1FVC
-2.27095905
FEV1FVCZ
1.100000024
FEV1_baseline
66.62910966
FEVpcpred
1.485625029
FVC
-1.521507112
FVCZ
80.83405795
FVCpcpred
19132
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:31Z
INSDC first public
2022-11-29T01:24:31Z
INSDC last update
public
INSDC status
44769
RawReads_ASVpipeline
SRS10483980
SRA accession
BSP0227
Submitter Id
BA
WRrepeats
BA
WRrepeats_BP
no
acut_exac12m
Adherent
adherence
no
adm
4.94
ageyart
yes
all_3
yes
antibiotic12m
1
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0227
barcode
806rcbc11
barcode_806R
NCBI
broker name
2017-11-01
collection_date
yes
cotrimoxazole
no
cough_enrl
2011-06-15T00:00:00
dateart
2008-09-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
5
duryart
2017-11-01T00:00:00
endfollowup
['NA', '2017-05-17T00:00:00']
endtreatdate
2016-06
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-2.516931299
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
11.3
host_age
22.015396
host_body_mass_index
HIV-associated chronic lung disease
host_disease
66.62910966
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B1001
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
TCCGACACAATT
index_sequence
sputum
isolation_source
18 mths
lastvisit
2017-11-01T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R1
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:10:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.03608
templateDNA_16SqPCR
22.45
templateDNA_16SqPCR_Cq
50866.77
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2017-11-01T00:00:00
visit_date
7
visittotno
40.6
weight
D01
well
1.4841894
zbmiuk
-1.4441795
zhauk
0.43110269
zwauk
no
zymo_DNA