MIGS/MIMS/MIMARKS.host-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1999-02-23T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249006
External Id
0.93188143
FEV1FVC
0.660957789
FEV1FVCZ
2.3
FEV1_baseline
92.93127318
FEVpcpred
2.468125105
FVC
-0.83337039
FVCZ
88.91730602
FVCpcpred
14370
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:39Z
INSDC first public
2022-11-29T01:24:39Z
INSDC last update
public
INSDC status
32004
RawReads_ASVpipeline
SRS10550327
SRA accession
BSP0685
Submitter Id
Not abnormal
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
yes
acut_exac12m
Adherent
adherence
no
adm
6.98
ageyart
no
all_3
no
antibiotic12m
1
any3_reasons
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
no
attendschool
BSP0685
barcode
806rcbc117
barcode_806R
NCBI
broker name
32
cd4
2019-06-05
collection_date
yes
cotrimoxazole
no
cough_enrl
2006-02-16T00:00:00
dateart
2006-02-12T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
12.38
duryart
2019-06-05T00:00:00
endfollowup
['NA', '2019-06-05T00:00:00']
endtreatdate
2018-07
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-0.543842279
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
20.2
host_age
23.496077
host_body_mass_index
HIV-associated chronic lung disease
host_disease
92.93127318
host_height
yes
host_hiv_stat
female
host_sex
B1216
host_subject_id
human respiratory
host_tissue_sampled
CGTCCGAAATAC
index_sequence
sputum
isolation_source
12 mths
lastvisit
2019-06-05T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
yes
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
11:30:00
sp05time
study ended
study_complt_stat
yes
tbtreat
0.012372634
templateDNA_16SqPCR
23.56
templateDNA_16SqPCR_Cq
17443.3446
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 48
visit
yes
visit012
no
visit018
no
visit1218
2019-06-05T00:00:00
visit_date
5
visittotno
0
vllog
0
vload
54
weight
F02
well
0.57322729
zbmiuk
-1.9961376
zhauk
-0.53408664
zwauk
no
zymo_DNA