MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2001-06-04T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22250761
External Id
0.868216998
FEV1FVC
-0.193610179
FEV1FVCZ
2.099999905
FEV1_baseline
67.66106762
FEVpcpred
2.418750048
FVC
-2.551572371
FVCZ
68.46643429
FVCpcpred
18435
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:47Z
INSDC first public
2022-11-29T01:24:47Z
INSDC last update
public
INSDC status
31167
RawReads_ASVpipeline
SRS10620551
SRA accession
BSP0180
Submitter Id
Not abnormal
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
8.29
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0180
barcode
806rcbc382
barcode_806R
NCBI
broker name
662
cd4
2017-09-14
collection_date
no
cotrimoxazole
no
cough_enrl
2009-09-17T00:00:00
dateart
2009-08-15T00:00:00
datehiv
7.07
duryart
2018-03-01T00:00:00
endfollowup
['NA', '2017-09-14T00:00:00']
endtreatdate
2016-10
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-2.390453455
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
16.2
host_age
16.379278
host_body_mass_index
HIV-associated chronic lung disease
host_disease
67.66106762
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1024
host_subject_id
human respiratory
host_tissue_sampled
GAGTTGTCACGG
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-03-01T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R3
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:15:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
0.313885156
templateDNA_16SqPCR
19.09171304
templateDNA_16SqPCR_Cq
442525.5808
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 48
visit
yes
visit012
yes
visit018
yes
visit1218
2017-09-14T00:00:00
visit_date
7
visittotno
3.7781513
vllog
6000
vload
44
weight
F11
well
-2.0665178
zbmiuk
-1.386487
zhauk
-2.2954178
zwauk
no
zymo_DNA