MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2000-01-16T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22250739
External Id
0.868778238
FEV1FVC
-0.687341462
FEV1FVCZ
1.68
FEV1_baseline
76.31490287
FEVpcpred
1.933750033
FVC
-1.543716524
FVCZ
79.88371031
FVCpcpred
20310
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:45Z
INSDC first public
2022-11-29T01:24:45Z
INSDC last update
public
INSDC status
33643
RawReads_ASVpipeline
SRS10620459
SRA accession
BSP0071
Submitter Id
Not abnormal
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
yes
acut_exac12m
Not Adherent
adherence
no
adm
13.63
ageyart
no
all_3
no
antibiotic12m
2
any3_reasons
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
yes
attendschool
BSP0071
barcode
806rcbc198
barcode_806R
NCBI
broker name
32
cd4
2017-04-07
collection_date
yes
cotrimoxazole
yes
cough_enrl
2013-09-02T00:00:00
dateart
2013-08-14T00:00:00
datehiv
42913
dod
3.59
duryart
2017-06-27T00:00:00
endfollowup
['2017-06-23T00:00:00', '2017-06-23T00:00:00']
endtreatdate
2017-04
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.8018897
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
yes
hospitalised12m
Homo sapiens
host
17.2
host_age
17.43334
host_body_mass_index
HIV-associated chronic lung disease
host_disease
76.31490287
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B1064
host_subject_id
human respiratory
host_tissue_sampled
GGTAACAGCTCG
index_sequence
sputum
isolation_source
2 wks
lastvisit
2017-04-21T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
yes
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
resolution of oesophageal candida
reason_hospi
no
rs14antib
R3
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:30:00
sp05time
death
study_complt_stat
yes
tbtreat
0.147853323
templateDNA_16SqPCR
20.26660545
templateDNA_16SqPCR_Cq
208448.4614
templateDNA_16SqPCR_copies
human sputum metagenome
title
Died
treatstopreason
Placebo
trial_arm
Week 0
visit
no
visit012
no
visit018
no
visit1218
2017-04-04T00:00:00
visit_date
1
visittotno
3.2552724
vllog
1800
vload
36.2
weight
G12
well
-1.6123927
zbmiuk
-3.2089901
zhauk
-3.6269212
zwauk
no
zymo_DNA