MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2002-09-02T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246646
External Id
0.908458904
FEV1FVC
0.411019254
FEV1FVCZ
2.94
FEV1_baseline
103.5077394
FEVpcpred
3.236249924
FVC
0.051293873
FVCZ
100.6395034
FVCpcpred
21992
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:34Z
INSDC first public
2022-11-29T01:24:34Z
INSDC last update
public
INSDC status
50134
RawReads_ASVpipeline
SRS10548190
SRA accession
BSP0435
Submitter Id
no
adm
7.36
ageyart
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0435
barcode
806rcbc30
barcode_806R
NCBI
broker name
702
cd4
2018-06-28
collection_date
no
cotrimoxazole
2010-01-10T00:00:00
dateart
2006-06-15T00:00:00
datehiv
8.46
duryart
['NA', 'not applicable']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
0.2642996
fev1z
Zimbabwe: Harare
geo_loc_name
comparison group
group
Homo sapiens
host
15.8
host_age
18.423161
host_body_mass_index
No HIV-associated chronic lung disease
host_disease
103.5077394
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
C140
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
GTTGGTCAATCT
index_sequence
sputum
isolation_source
17.82 S 31.04 E
lat_lon
yes
one_visit
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
rs14antib
R1
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
11:43:00
sp05time
yes
tbtreat
0.028390625
templateDNA_16SqPCR
22.7584824
templateDNA_16SqPCR_Cq
40026.03
templateDNA_16SqPCR_copies
human sputum metagenome
title
Week 0
visit
2018-06-28T00:00:00
visit_date
0
vload
46.4
weight
G03
well
-0.66588002
zbmiuk
-1.8225394
zhauk
-1.5811534
zwauk
no
zymo_DNA