MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2002-02-02T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249131
External Id
0.829971208
FEV1FVC
-1.524545272
FEV1FVCZ
0.72
FEV1_baseline
59.19352971
FEVpcpred
0.867500007
FVC
-2.598398629
FVCZ
67.90629893
FVCpcpred
22402
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:43Z
INSDC first public
2022-11-29T01:24:43Z
INSDC last update
public
INSDC status
44815
RawReads_ASVpipeline
SRS10550486
SRA accession
BYC122T3
Submitter Id
Not abnormal
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
no
acut_exac12m
Not Adherent
adherence
no
adm
no
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
no
attendschool
BYC122T3
barcode
806rcbc375
barcode_806R
NCBI
broker name
1446
cd4
2018-01-29
collection_date
yes
cotrimoxazole
no
cough_enrl
2018-07-16T00:00:00
endfollowup
['2018-07-16T00:00:00', '2018-07-16T00:00:00']
endtreatdate
2018-01
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-2.9854226
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
15.9
host_age
15.260631
host_body_mass_index
HIV-associated chronic lung disease
host_disease
59.19352971
host_height
yes
host_hiv_stat
male
host_sex
B3068
host_subject_id
human respiratory
host_tissue_sampled
GTCTCATGTAGG
index_sequence
sputum
isolation_source
6 mths
lastvisit
2018-07-16T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
yes
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['0.5', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:54:00
sp05time
LTFU
study_complt_stat
no
tbtreat
0.001726143
templateDNA_16SqPCR
26.5784
templateDNA_16SqPCR_Cq
2433.572635
templateDNA_16SqPCR_copies
human sputum metagenome
title
Defaulted
treatstopreason
Placebo
trial_arm
Week 0
visit
no
visit012
no
visit018
no
visit1218
2018-01-25T00:00:00
visit_date
3
visittotno
4.4065404
vllog
25500
vload
17.8
weight
G10
well
-2.8404009
zbmiuk
-8.5813379
zhauk
-9.345624
zwauk
no
zymo_DNA