MIGS/MIMS/MIMARKS.host-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1999-05-05T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248975
External Id
0.797949238
FEV1FVC
-1.206220785
FEV1FVCZ
2.140000105
FEV1_baseline
69.75631734
FEVpcpred
2.68187499
FVC
-1.882167157
FVCZ
76.61222873
FVCpcpred
15539
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:42Z
INSDC first public
2022-11-29T01:24:42Z
INSDC last update
public
INSDC status
32666
RawReads_ASVpipeline
SRS10550440
SRA accession
BSP0585
Submitter Id
Not abnormal
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
10.2
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0585
barcode
806rcbc168
barcode_806R
NCBI
broker name
140
cd4
2019-01-09
collection_date
yes
cotrimoxazole
no
cough_enrl
2009-07-18T00:00:00
dateart
2009-06-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
8.54
duryart
2019-06-19T00:00:00
endfollowup
['NA', '2019-01-09T00:00:00']
endtreatdate
2018-01
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-2.332177932
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
19.6
host_age
18.469683
host_body_mass_index
HIV-associated chronic lung disease
host_disease
69.75631734
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1167
host_subject_id
human respiratory
host_tissue_sampled
CGACTGTCTTAA
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-06-19T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['1.5', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
08:55:00
sp05time
study ended
study_complt_stat
yes
tbtreat
1.048971358
templateDNA_16SqPCR
17.1217509
templateDNA_16SqPCR_Cq
1478874.202
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 48
visit
yes
visit012
yes
visit018
yes
visit1218
2019-01-09T00:00:00
visit_date
7
visittotno
4.3521824
vllog
22500
vload
46.4
weight
A09
well
-1.6389813
zbmiuk
-2.6963096
zhauk
-3.5129068
zwauk
no
zymo_DNA