MIGS/MIMS/MIMARKS.host-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2006-05-07T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248960
External Id
0.844955935
FEV1FVC
-0.46827514
FEV1FVCZ
1.559999943
FEV1_baseline
78.26721734
FEVpcpred
1.846250057
FVC
-1.571399489
FVCZ
80.61383778
FVCpcpred
13008
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:41Z
INSDC first public
2022-11-29T01:24:41Z
INSDC last update
public
INSDC status
29069
RawReads_ASVpipeline
SRS10550394
SRA accession
BSP0520
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
4.82
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0520
barcode
806rcbc220
barcode_806R
NCBI
broker name
400
cd4
2018-09-04
collection_date
yes
cotrimoxazole
no
cough_enrl
2011-03-03T00:00:00
dateart
2010-09-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
6.59
duryart
2019-02-19T00:00:00
endfollowup
['NA', '2018-09-04T00:00:00']
endtreatdate
2017-10
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.666920787
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
12.3
host_age
14.454246
host_body_mass_index
HIV-associated chronic lung disease
host_disease
78.26721734
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1133
host_subject_id
human respiratory
host_tissue_sampled
CATTTGGACGAC
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-02-19T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
08:54:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.026592275
templateDNA_16SqPCR
22.37635891
templateDNA_16SqPCR_Cq
37490.66091
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 48
visit
yes
visit012
yes
visit018
yes
visit1218
2018-09-04T00:00:00
visit_date
7
visittotno
1.90309
vllog
80
vload
30.6
weight
D03
well
-2.0619202
zbmiuk
-0.64622271
zhauk
-1.5884644
zwauk
no
zymo_DNA