MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2004-04-01T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246944
External Id
0.872488775
FEV1FVC
-0.513215686
FEV1FVCZ
1.33
FEV1_baseline
72.25285117
FEVpcpred
1.524374962
FVC
-1.991428471
FVCZ
75.38415278
FVCpcpred
16478
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:37Z
INSDC first public
2022-11-29T01:24:37Z
INSDC last update
public
INSDC status
49171
RawReads_ASVpipeline
SRS10548908
SRA accession
BYD14PT3
Submitter Id
no
acut_exac12m
Not Adherent
adherence
no
adm
1.38
ageyart
no
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BYD14PT3
barcode
806rcbc174
barcode_806R
NCBI
broker name
914
cd4
2019-03-14
collection_date
yes
cotrimoxazole
no
cough_enrl
2005-08-17T00:00:00
dateart
2005-04-10T00:00:00
datehiv
12.65
duryart
2019-06-06T00:00:00
endfollowup
['NA', '2019-03-14T00:00:00']
endtreatdate
2018-04
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
3
f24mrcscore
-2.037977331
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
14.9
host_age
15.990166
host_body_mass_index
HIV-associated chronic lung disease
host_disease
72.25285117
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B3093
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
CGGACTACAACT
index_sequence
sputum
isolation_source
15 mths
lastvisit
2019-06-06T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
no
one_visit
yes
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R1
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:40:00
sp05time
study ended
study_complt_stat
no
tbtreat
0.005130763
templateDNA_16SqPCR
25.36647832
templateDNA_16SqPCR_Cq
7233.52
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 48
visit
yes
visit012
no
visit018
no
visit1218
2019-03-14T00:00:00
visit_date
6
visittotno
1.5910646
vllog
39
vload
28.2
weight
G09
well
-1.8713146
zbmiuk
-4.3985691
zhauk
-4.0735297
zwauk
no
zymo_DNA