MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2002-08-15T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249129
External Id
0.831792056
FEV1FVC
-0.89957958
FEV1FVCZ
2.08
FEV1_baseline
84.36055074
FEVpcpred
2.500624895
FVC
-0.770287261
FVCZ
90.42843515
FVCpcpred
11246
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:43Z
INSDC first public
2022-11-29T01:24:43Z
INSDC last update
public
INSDC status
25248
RawReads_ASVpipeline
SRS10550482
SRA accession
BYC120T3
Submitter Id
Not abnormal
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
12.83
ageyart
no
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BYC120T3
barcode
806rcbc205
barcode_806R
NCBI
broker name
640
cd4
2018-01-29
collection_date
yes
cotrimoxazole
no
cough_enrl
2015-06-15T00:00:00
dateart
2015-06-15T00:00:00
datehiv
2.63
duryart
2019-01-07T00:00:00
endfollowup
['2018-12-31T00:00:00', '2018-12-31T00:00:00']
endtreatdate
2018-01
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-1.1604304
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
15.4
host_age
17.777779
host_body_mass_index
HIV-associated chronic lung disease
host_disease
84.36055074
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B3066
host_subject_id
human respiratory
host_tissue_sampled
TCGCATGAAGTC
index_sequence
sputum
isolation_source
12 mths
lastvisit
2019-01-07T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
no
one_visit
yes
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:45:00
sp05time
study ended
study_complt_stat
no
tbtreat
0.01643332
templateDNA_16SqPCR
23.16
templateDNA_16SqPCR_Cq
23168.23267
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 0
visit
yes
visit012
no
visit018
no
visit1218
2018-01-18T00:00:00
visit_date
5
visittotno
4.3617277
vllog
23000
vload
40
weight
E01
well
-0.90436852
zbmiuk
-2.689698
zhauk
-2.2582321
zwauk
no
zymo_DNA