MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2006-04-03T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249113
External Id
0.862990638
FEV1FVC
-0.153558975
FEV1FVCZ
2.24
FEV1_baseline
123.5685211
FEVpcpred
2.595624924
FVC
1.963248989
FVCZ
124.5311024
FVCpcpred
20375
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:44Z
INSDC first public
2022-11-29T01:24:44Z
INSDC last update
public
INSDC status
46571
RawReads_ASVpipeline
SRS10550530
SRA accession
BSP0216
Submitter Id
no
adm
9.28
ageyart
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0216
barcode
806rcbc9
barcode_806R
NCBI
broker name
1358
cd4
2017-10-18
collection_date
yes
cotrimoxazole
2015-07-15T00:00:00
dateart
2008-06-15T00:00:00
datehiv
2.26
duryart
['NA', 'not applicable']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
1.884379
fev1z
Zimbabwe: Harare
geo_loc_name
comparison group
group
Homo sapiens
host
11.5
host_age
16.598763
host_body_mass_index
No HIV-associated chronic lung disease
host_disease
123.5685211
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
C149
host_subject_id
human respiratory
host_tissue_sampled
GTATGCGCTGTA
index_sequence
sputum
isolation_source
17.82 S 31.04 E
lat_lon
yes
one_visit
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
R2
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
12:15:00
sp05time
no
tbtreat
0.029626746
templateDNA_16SqPCR
22.3
templateDNA_16SqPCR_Cq
41768.75784
templateDNA_16SqPCR_copies
human sputum metagenome
title
Week 0
visit
2017-10-18T00:00:00
visit_date
39
vload
33
weight
B01
well
-0.3102842
zbmiuk
-0.71605474
zhauk
-0.58964276
zwauk
no
zymo_DNA