MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2003-07-15T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246640
External Id
0.904949008
FEV1FVC
0.055976608
FEV1FVCZ
2.88
FEV1_baseline
107.8416682
FEVpcpred
3.182499886
FVC
0.536119692
FVCZ
107.0783941
FVCpcpred
19890
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:33Z
INSDC first public
2022-11-29T01:24:33Z
INSDC last update
public
INSDC status
49589
RawReads_ASVpipeline
SRS10548188
SRA accession
BSP0412
Submitter Id
no
adm
10
ageyart
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0412
barcode
806rcbc20
barcode_806R
NCBI
broker name
202
cd4
2018-05-30
collection_date
yes
cotrimoxazole
2013-07-15T00:00:00
dateart
2008-06-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
4.87
duryart
['NA', 'not applicable']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
0.61209416
fev1z
Zimbabwe: Harare
geo_loc_name
comparison group
group
Homo sapiens
host
14.8
host_age
22.911436
host_body_mass_index
No HIV-associated chronic lung disease
host_disease
107.8416682
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
C133
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
GGATCGCAGATC
index_sequence
sputum
isolation_source
17.82 S 31.04 E
lat_lon
yes
one_visit
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
rs14antib
COTRIMOXAZOLE
rs15antibty
R1
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:35:00
sp05time
no
tbtreat
0.03479
templateDNA_16SqPCR
22.5
templateDNA_16SqPCR_Cq
49048.08
templateDNA_16SqPCR_copies
human sputum metagenome
title
Week 0
visit
2018-05-30T00:00:00
visit_date
3480
vload
58.8
weight
E02
well
1.0110408
zbmiuk
-0.28043476
zhauk
0.66777509
zwauk
no
zymo_DNA