MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1998-11-19T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246608
External Id
0.904742587
FEV1FVC
0.145030583
FEV1FVCZ
2.79
FEV1_baseline
102.9986314
FEVpcpred
3.08375001
FVC
0.111298549
FVCZ
101.4902609
FVCpcpred
14852
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:34Z
INSDC first public
2022-11-29T01:24:34Z
INSDC last update
public
INSDC status
44309
RawReads_ASVpipeline
SRS10548192
SRA accession
BSP0202
Submitter Id
no
adm
8.57
ageyart
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
no
attendschool
BSP0202
barcode
806rcbc190
barcode_806R
NCBI
broker name
506
cd4
2017-10-02
collection_date
yes
cotrimoxazole
2007-06-15T00:00:00
dateart
2007-06-01T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
10.3
duryart
['NA', 'not applicable']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
0.23295203
fev1z
Zimbabwe: Harare
geo_loc_name
comparison group
group
Homo sapiens
host
18.8
host_age
25.412312
host_body_mass_index
No HIV-associated chronic lung disease
host_disease
102.9986314
host_height
yes
host_hiv_stat
female
host_sex
C144
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
ACACTAGATCCG
index_sequence
sputum
isolation_source
17.82 S 31.04 E
lat_lon
yes
one_visit
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R1
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
14:00:00
sp05time
no
tbtreat
0.299623674
templateDNA_16SqPCR
19.26319873
templateDNA_16SqPCR_Cq
422419.28
templateDNA_16SqPCR_copies
human sputum metagenome
title
Week 0
visit
2017-10-02T00:00:00
visit_date
24500
vload
63.6
weight
G11
well
1.2219561
zbmiuk
-0.89917445
zhauk
0.6479789
zwauk
no
zymo_DNA