MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2008-08-03T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22108615
External Id
0.868852392
FEV1FVC
-0.637541132
FEV1FVCZ
1.059999943
FEV1_baseline
81.28162653
FEVpcpred
1.220000029
FVC
-1.231834796
FVCZ
84.34305546
FVCpcpred
10609
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:31Z
INSDC first public
2022-11-29T01:24:31Z
INSDC last update
public
INSDC status
41620
RawReads_ASVpipeline
SRS10483983
SRA accession
BSP0257
Submitter Id
no
acut_exac12m
Adherent
adherence
no
adm
1.07
ageyart
no
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0257
barcode
806rcbc66
barcode_806R
NCBI
broker name
2017-12-20
collection_date
yes
cotrimoxazole
no
cough_enrl
2009-08-28T00:00:00
dateart
2009-03-18T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
6.95
duryart
2017-12-20T00:00:00
endfollowup
['NA', '2017-07-12T00:00:00']
endtreatdate
2016-08
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.423215949
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
9.3
host_age
13.945799
host_body_mass_index
HIV-associated chronic lung disease
host_disease
81.28162653
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B1006
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
TTCCTAGGTGAG
index_sequence
sputum
isolation_source
18 mths
lastvisit
2017-12-20T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
yes
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R1
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
08:50:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.526710013
templateDNA_16SqPCR
18.52154217
templateDNA_16SqPCR_Cq
742573.04
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 72
visit
no
visit012
no
visit018
yes
visit1218
2017-12-20T00:00:00
visit_date
7
visittotno
22
weight
C08
well
-1.5803158
zbmiuk
-1.546201
zhauk
-2.0271688
zwauk
no
zymo_DNA