MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2004-01-11T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249180
External Id
0.996130826
FEV1FVC
1.783196637
FEV1FVCZ
1.77
FEV1_baseline
110.3472601
FEVpcpred
1.776875019
FVC
-0.003350356
FVCZ
99.95840785
FVCpcpred
6296
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:44Z
INSDC first public
2022-11-29T01:24:44Z
INSDC last update
public
INSDC status
29631
RawReads_ASVpipeline
SRS10550532
SRA accession
BYF101T3
Submitter Id
no
adm
4.26
ageyart
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BYF101T3
barcode
806rcbc215
barcode_806R
NCBI
broker name
757
cd4
2017-07-03
collection_date
yes
cotrimoxazole
2008-04-15T00:00:00
dateart
2008-02-04T00:00:00
datehiv
9.22
duryart
['NA', 'not applicable']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
0.78658515
fev1z
Malawi: Blantyre
geo_loc_name
comparison group
group
Homo sapiens
host
13.4
host_age
18.027763
host_body_mass_index
No HIV-associated chronic lung disease
host_disease
110.3472601
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
C302
host_subject_id
human respiratory
host_tissue_sampled
TGTGATGGAGAA
index_sequence
sputum
isolation_source
15.77 S 35.02 E
lat_lon
yes
one_visit
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['0.5', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:35:00
sp05time
no
tbtreat
0.014367353
templateDNA_16SqPCR
23.35
templateDNA_16SqPCR_Cq
20255.56541
templateDNA_16SqPCR_copies
human sputum metagenome
title
Week 0
visit
2017-07-03T00:00:00
visit_date
0
vload
30
weight
G02
well
-0.14843859
zbmiuk
-3.6160028
zhauk
-2.5517542
zwauk
no
zymo_DNA