MIGS/MIMS/MIMARKS.host-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1998-10-29T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248959
External Id
0.906808647
FEV1FVC
0.609064598
FEV1FVCZ
2.980000019
FEV1_baseline
81.9831473
FEVpcpred
3.286250114
FVC
-1.766633826
FVCZ
78.03509742
FVCpcpred
15992
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:41Z
INSDC first public
2022-11-29T01:24:41Z
INSDC last update
public
INSDC status
36562
RawReads_ASVpipeline
SRS10550391
SRA accession
BSP0516
Submitter Id
Not abnormal
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
yes
acut_exac12m
Adherent
adherence
no
adm
15.81
ageyart
yes
all_3
no
antibiotic12m
1
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
no
attendschool
BSP0516
barcode
806rcbc364
barcode_806R
NCBI
broker name
362
cd4
2018-09-03
collection_date
yes
cotrimoxazole
no
cough_enrl
2014-08-21T00:00:00
dateart
2012-08-01T00:00:00
datehiv
3.12
duryart
2019-02-18T00:00:00
endfollowup
['NA', '2018-09-03T00:00:00']
endtreatdate
2017-10
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.404942991
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
19.8
host_age
18.535618
host_body_mass_index
HIV-associated chronic lung disease
host_disease
81.9831473
host_height
yes
host_hiv_stat
male
host_sex
B1130
host_subject_id
human respiratory
host_tissue_sampled
TGACTTTGTGTG
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-02-18T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['1.5', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:43:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.114751283
templateDNA_16SqPCR
20.40661751
templateDNA_16SqPCR_Cq
161780.1203
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 48
visit
yes
visit012
yes
visit018
yes
visit1218
2018-09-03T00:00:00
visit_date
7
visittotno
4.217484
vllog
16500
vload
54.2
weight
D09
well
-1.6354966
zbmiuk
-0.90694928
zhauk
-2.0578184
zwauk
no
zymo_DNA