MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2004-08-08T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249152
External Id
0.697802167
FEV1FVC
-2.693981596
FEV1FVCZ
1.27
FEV1_baseline
51.36718105
FEVpcpred
1.820000052
FVC
-2.641880769
FVCZ
66.48478608
FVCpcpred
13035
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:44Z
INSDC first public
2022-11-29T01:24:44Z
INSDC last update
public
INSDC status
24337
RawReads_ASVpipeline
SRS10550509
SRA accession
BYD13KT3
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
6.85
ageyart
no
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BYD13KT3
barcode
806rcbc139
barcode_806R
NCBI
broker name
691
cd4
2019-05-13
collection_date
yes
cotrimoxazole
no
cough_enrl
2011-06-15T00:00:00
dateart
2011-06-15T00:00:00
datehiv
6.99
duryart
2019-05-13T00:00:00
endfollowup
['NA', '2019-04-30T00:00:00']
endtreatdate
2018-06
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
3
f24mrcscore
-3.606979079
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
14.7
host_age
22.287157
host_body_mass_index
HIV-associated chronic lung disease
host_disease
51.36718105
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B3103
host_subject_id
human respiratory
host_tissue_sampled
TAGCGGATCACG
index_sequence
sputum
isolation_source
12 mths
lastvisit
2019-05-13T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
no
one_visit
yes
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:27:00
sp05time
study ended
study_complt_stat
no
tbtreat
3.609349161
templateDNA_16SqPCR
15.32164495
templateDNA_16SqPCR_Cq
5088578.747
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 48
visit
yes
visit012
no
visit018
no
visit1218
2019-05-13T00:00:00
visit_date
5
visittotno
4.5728717
vllog
37400
vload
53.2
weight
D05
well
0.84760612
zbmiuk
-1.1494122
zhauk
0.059176162
zwauk
no
zymo_DNA