MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1998-02-02T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249173
External Id
0.813039303
FEV1FVC
-1.1748732
FEV1FVCZ
1.59
FEV1_baseline
59.68639314
FEVpcpred
1.955625057
FVC
-2.696175047
FVCZ
64.99545868
FVCpcpred
9425
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:43Z
INSDC first public
2022-11-29T01:24:43Z
INSDC last update
public
INSDC status
18664
RawReads_ASVpipeline
SRS10550500
SRA accession
BYE12RT3
Submitter Id
Not abnormal
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
no
acut_exac12m
Not Adherent
adherence
no
adm
10.1
ageyart
no
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BYE12RT3
barcode
806rcbc301
barcode_806R
NCBI
broker name
2018-12-17
collection_date
yes
cotrimoxazole
no
cough_enrl
2008-03-10T00:00:00
dateart
2008-01-10T00:00:00
datehiv
9.39
duryart
2018-12-17T00:00:00
endfollowup
['NA', '2018-07-02T00:00:00']
endtreatdate
2017-07
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
3
f24mrcscore
-3.006122747
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
20.8
host_age
19.473406
host_body_mass_index
HIV-associated chronic lung disease
host_disease
59.68639314
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B3034
host_subject_id
human respiratory
host_tissue_sampled
TACGGGTCTTTA
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-12-17T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
no
one_visit
yes
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
13:30:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
0.01991029
templateDNA_16SqPCR
22.87
templateDNA_16SqPCR_Cq
28070.17957
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 72
visit
no
visit012
no
visit018
yes
visit1218
2018-12-17T00:00:00
visit_date
7
visittotno
48
weight
E01
well
-1.020517
zbmiuk
-1.1014336
zhauk
-1.4428922
zwauk
no
zymo_DNA