MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2001-06-01T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249118
External Id
0.923856182
FEV1FVC
0.701964084
FEV1FVCZ
3.42
FEV1_baseline
109.0810989
FEVpcpred
3.701874971
FVC
0.30335809
FVCZ
103.7903564
FVCpcpred
20067
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:44Z
INSDC first public
2022-11-29T01:24:44Z
INSDC last update
public
INSDC status
37883
RawReads_ASVpipeline
SRS10550517
SRA accession
BSP0399
Submitter Id
no
adm
6.71
ageyart
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
no
attendschool
BSP0399
barcode
806rcbc320
barcode_806R
NCBI
broker name
618
cd4
2018-05-21
collection_date
no
cotrimoxazole
2008-02-15T00:00:00
dateart
2007-06-15T00:00:00
datehiv
10.26
duryart
['NA', 'not applicable']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
0.69728464
fev1z
Zimbabwe: Harare
geo_loc_name
comparison group
group
Homo sapiens
host
16.9
host_age
19.397322
host_body_mass_index
No HIV-associated chronic lung disease
host_disease
109.0810989
host_height
yes
host_hiv_stat
male
host_sex
C118
host_subject_id
human respiratory
host_tissue_sampled
GATCTTCAGTAC
index_sequence
sputum
isolation_source
17.82 S 31.04 E
lat_lon
yes
one_visit
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
11:15:00
sp05time
no
tbtreat
0.007543636
templateDNA_16SqPCR
24.40958891
templateDNA_16SqPCR_Cq
10635.2658
templateDNA_16SqPCR_copies
human sputum metagenome
title
Week 0
visit
2018-05-21T00:00:00
visit_date
68
vload
51.6
weight
H03
well
-0.4947837
zbmiuk
-1.769224
zhauk
-1.5677937
zwauk
no
zymo_DNA