MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2006-11-10T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249162
External Id
0.900130794
FEV1FVC
-0.043053366
FEV1FVCZ
1.29
FEV1_baseline
70.62256072
FEVpcpred
1.433125019
FVC
-2.340458602
FVCZ
70.70015154
FVCpcpred
16775
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:43Z
INSDC first public
2022-11-29T01:24:43Z
INSDC last update
public
INSDC status
38332
RawReads_ASVpipeline
SRS10550493
SRA accession
BYD14BT3
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Not Adherent
adherence
no
adm
8.59
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BYD14BT3
barcode
806rcbc140
barcode_806R
NCBI
broker name
880
cd4
2019-01-14
collection_date
no
cough_enrl
2015-06-15T00:00:00
dateart
2015-06-15T00:00:00
datehiv
2.66
duryart
2019-07-01T00:00:00
endfollowup
['NA', '2019-01-14T00:00:00']
endtreatdate
2018-02
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-2.223694778
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
12.1
host_age
15.408163
host_body_mass_index
HIV-associated chronic lung disease
host_disease
70.62256072
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B3075
host_subject_id
human respiratory
host_tissue_sampled
CGCCAAATAACC
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-07-01T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:50:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.025728539
templateDNA_16SqPCR
22.52330048
templateDNA_16SqPCR_Cq
36272.93698
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 48
visit
yes
visit012
yes
visit018
yes
visit1218
2019-01-14T00:00:00
visit_date
7
visittotno
0
vllog
0
vload
30.2
weight
E05
well
-1.4583068
zbmiuk
-1.5141275
zhauk
-1.7650836
zwauk
no
zymo_DNA