MIGS/MIMS/MIMARKS.host-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2002-12-17T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248950
External Id
0.896642784
FEV1FVC
-0.16522005
FEV1FVCZ
2.12
FEV1_baseline
84.5205244
FEVpcpred
2.364375114
FVC
-1.140409504
FVCZ
85.17591652
FVCpcpred
18915
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:39Z
INSDC first public
2022-11-29T01:24:39Z
INSDC last update
public
INSDC status
40572
RawReads_ASVpipeline
SRS10550336
SRA accession
BSP0475
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
12.62
ageyart
no
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0475
barcode
806rcbc186
barcode_806R
NCBI
broker name
532
cd4
2018-08-06
collection_date
yes
cotrimoxazole
no
cough_enrl
2015-08-01T00:00:00
dateart
2015-07-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
3.01
duryart
2019-07-08T00:00:00
endfollowup
['2019-07-08T00:00:00', '2019-07-08T00:00:00']
endtreatdate
2018-08
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.1863301
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
15.6
host_age
19.992868
host_body_mass_index
HIV-associated chronic lung disease
host_disease
84.5205244
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B1232
host_subject_id
human respiratory
host_tissue_sampled
AAGATGGATCAG
index_sequence
sputum
isolation_source
12 mths
lastvisit
2019-07-08T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
yes
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
11:40:00
sp05time
study ended
study_complt_stat
no
tbtreat
0.473576769
templateDNA_16SqPCR
18.2802456
templateDNA_16SqPCR_Cq
667664.0506
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 0
visit
yes
visit012
no
visit018
no
visit1218
2018-08-01T00:00:00
visit_date
5
visittotno
1.7853298
vllog
61
vload
47.6
weight
C11
well
-0.10885816
zbmiuk
-1.4154739
zhauk
-1.0039792
zwauk
no
zymo_DNA