MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1999-01-01T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22108651
External Id
0.728175438
FEV1FVC
-1.956414081
FEV1FVCZ
2.200000048
FEV1_baseline
58.38571308
FEVpcpred
3.02125001
FVC
-2.499064304
FVCZ
69.02274036
FVCpcpred
13213
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:28Z
INSDC first public
2022-11-29T01:24:28Z
INSDC last update
public
INSDC status
41031
RawReads_ASVpipeline
SRS10483900
SRA accession
BSP0504
Submitter Id
yes
acut_exac12m
Not Adherent
adherence
no
adm
15.3
ageyart
yes
all_3
no
antibiotic12m
1
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
no
attendschool
BSP0504
barcode
806rcbc154
barcode_806R
NCBI
broker name
2018-08-27
collection_date
yes
cotrimoxazole
no
cough_enrl
2014-04-22T00:00:00
dateart
2007-05-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
2.97
duryart
2018-08-27T00:00:00
endfollowup
['NA', '2018-03-12T00:00:00']
endtreatdate
2017-04
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-3.17498407
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
19.6
host_age
19.443666
host_body_mass_index
HIV-associated chronic lung disease
host_disease
58.38571308
host_height
yes
host_hiv_stat
male
host_sex
B1065
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
CTCGAGAGTACG
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-08-27T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R1
run_processing_batch
stored in primestore
samp_mat_process
['1.5', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:10:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.017444199
templateDNA_16SqPCR
23.53013597
templateDNA_16SqPCR_Cq
24593.4
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2018-08-27T00:00:00
visit_date
7
visittotno
58.8
weight
C07
well
-1.0897506
zbmiuk
-0.48751661
zhauk
-1.3100771
zwauk
no
zymo_DNA