MIGS/MIMS/MIMARKS.host-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2004-03-04T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249041
External Id
0.831775647
FEV1FVC
-0.825532925
FEV1FVCZ
1.78
FEV1_baseline
73.69313635
FEVpcpred
2.140000105
FVC
-1.751377504
FVCZ
78.34859803
FVCpcpred
9089
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:40Z
INSDC first public
2022-11-29T01:24:40Z
INSDC last update
public
INSDC status
23271
RawReads_ASVpipeline
SRS10550355
SRA accession
BYE103T3
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
3.36
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BYE103T3
barcode
806rcbc177
barcode_806R
NCBI
broker name
2018-09-12
collection_date
yes
cotrimoxazole
no
cough_enrl
2007-07-15T00:00:00
dateart
2007-06-15T00:00:00
datehiv
9.78
duryart
2018-09-12T00:00:00
endfollowup
['NA', '2018-03-28T00:00:00']
endtreatdate
2017-04
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
-1.935434104
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
14.5
host_age
15.771874
host_body_mass_index
HIV-associated chronic lung disease
host_disease
73.69313635
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B3022
host_subject_id
human respiratory
host_tissue_sampled
CTACCGGATCAA
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-09-12T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:50:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.22094677
templateDNA_16SqPCR
19.39084929
templateDNA_16SqPCR_Cq
311497.9974
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2018-09-12T00:00:00
visit_date
7
visittotno
36.2
weight
B10
well
-1.8714418
zbmiuk
-1.7550336
zhauk
-2.1405058
zwauk
no
zymo_DNA