MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1998-09-04T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246631
External Id
0.838900654
FEV1FVC
-0.570965745
FEV1FVCZ
2.48
FEV1_baseline
75.01526436
FEVpcpred
2.956249952
FVC
-1.77964682
FVCZ
77.87979687
FVCpcpred
12543
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:36Z
INSDC first public
2022-11-29T01:24:36Z
INSDC last update
public
INSDC status
34913
RawReads_ASVpipeline
SRS10548279
SRA accession
BSP0361
Submitter Id
no
acut_exac12m
Adherent
adherence
no
adm
12.45
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
no
attendschool
BSP0361
barcode
806rcbc224
barcode_806R
NCBI
broker name
149
cd4
2018-03-28
collection_date
yes
cotrimoxazole
no
cough_enrl
2011-02-15T00:00:00
dateart
2011-02-01T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
7.11
duryart
2019-08-14T00:00:00
endfollowup
['2019-02-27T00:00:00', '2019-02-27T00:00:00']
endtreatdate
2018-03
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.9336939
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
19.5
host_age
17.325996
host_body_mass_index
HIV-associated chronic lung disease
host_disease
75.01526436
host_height
yes
host_hiv_stat
male
host_sex
B1197
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
GTTACGCATTAC
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-08-14T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R1
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
08:49:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
0.011557097
templateDNA_16SqPCR
24.03963229
templateDNA_16SqPCR_Cq
16293.57
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 0
visit
yes
visit012
yes
visit018
yes
visit1218
2018-03-26T00:00:00
visit_date
7
visittotno
4.1335387
vllog
13600
vload
46.6
weight
H03
well
-2.3430009
zbmiuk
-1.9071842
zhauk
-3.4408443
zwauk
no
zymo_DNA