MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1998-05-09T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249143
External Id
0.759969542
FEV1FVC
-1.899518759
FEV1FVCZ
1.87
FEV1_baseline
72.07319101
FEVpcpred
2.460624933
FVC
-1.18206803
FVCZ
84.35808431
FVCpcpred
11429
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:43Z
INSDC first public
2022-11-29T01:24:43Z
INSDC last update
public
INSDC status
23864
RawReads_ASVpipeline
SRS10550469
SRA accession
BYD10VT3
Submitter Id
Not abnormal
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
13.31
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BYD10VT3
barcode
806rcbc115
barcode_806R
NCBI
broker name
558
cd4
2018-07-02
collection_date
yes
cotrimoxazole
yes
cough_enrl
2011-08-30T00:00:00
dateart
2011-05-20T00:00:00
datehiv
5.92
duryart
2018-12-17T00:00:00
endfollowup
['NA', '2018-07-02T00:00:00']
endtreatdate
2017-07
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
-2.110479443
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
20.1
host_age
25.140478
host_body_mass_index
HIV-associated chronic lung disease
host_disease
72.07319101
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B3033
host_subject_id
human respiratory
host_tissue_sampled
ATACCTTCGGTA
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-12-17T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:15:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
0.007070043
templateDNA_16SqPCR
24.37
templateDNA_16SqPCR_Cq
9967.579024
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 48
visit
yes
visit012
yes
visit018
yes
visit1218
2018-07-02T00:00:00
visit_date
7
visittotno
4.0755467
vllog
11900
vload
60.4
weight
D02
well
1.058465
zbmiuk
-1.4307581
zhauk
0.26949388
zwauk
no
zymo_DNA