MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2004-07-30T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249183
External Id
0.906816495
FEV1FVC
0.013277265
FEV1FVCZ
2.22
FEV1_baseline
107.7370657
FEVpcpred
2.448124886
FVC
0.577449931
FVCZ
107.5485535
FVCpcpred
17858
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:44Z
INSDC first public
2022-11-29T01:24:44Z
INSDC last update
public
INSDC status
32547
RawReads_ASVpipeline
SRS10550536
SRA accession
BYF10DT3
Submitter Id
no
adm
9.88
ageyart
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BYF10DT3
barcode
806rcbc11
barcode_806R
NCBI
broker name
1003
cd4
2017-11-28
collection_date
yes
cotrimoxazole
2014-06-15T00:00:00
dateart
2013-06-15T00:00:00
datehiv
3.46
duryart
['NA', 'not applicable']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
0.60383123
fev1z
Malawi: Blantyre
geo_loc_name
comparison group
group
Homo sapiens
host
13.3
host_age
17.122473
host_body_mass_index
No HIV-associated chronic lung disease
host_disease
107.7370657
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
C314
host_subject_id
human respiratory
host_tissue_sampled
TCCGACACAATT
index_sequence
sputum
isolation_source
15.77 S 35.02 E
lat_lon
yes
one_visit
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['0.5', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
14:18:00
sp05time
no
tbtreat
0.182597454
templateDNA_16SqPCR
19.67
templateDNA_16SqPCR_Cq
257431.8757
templateDNA_16SqPCR_copies
human sputum metagenome
title
Week 0
visit
2017-11-25T00:00:00
visit_date
0
vload
36
weight
D01
well
-0.85410094
zbmiuk
-1.7478806
zhauk
-1.625779
zwauk
no
zymo_DNA