MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2005-12-18T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249110
External Id
0.882919701
FEV1FVC
-0.29216513
FEV1FVCZ
1.89
FEV1_baseline
103.8832025
FEVpcpred
2.140625
FVC
0.425217898
FVCZ
105.49114
FVCpcpred
11661
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:44Z
INSDC first public
2022-11-29T01:24:44Z
INSDC last update
public
INSDC status
27529
RawReads_ASVpipeline
SRS10550515
SRA accession
BSP0173
Submitter Id
no
adm
6.74
ageyart
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0173
barcode
806rcbc249
barcode_806R
NCBI
broker name
917
cd4
2017-09-11
collection_date
no
cotrimoxazole
2012-09-15T00:00:00
dateart
2012-01-01T00:00:00
datehiv
4.99
duryart
['NA', 'not applicable']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
0.30236533
fev1z
Zimbabwe: Harare
geo_loc_name
comparison group
group
Homo sapiens
host
11.7
host_age
16.397566
host_body_mass_index
No HIV-associated chronic lung disease
host_disease
103.8832025
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
C105
host_subject_id
human respiratory
host_tissue_sampled
ACACAAAGGGAG
index_sequence
sputum
isolation_source
17.82 S 31.04 E
lat_lon
yes
one_visit
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
13:10:00
sp05time
no
tbtreat
2.684682547
templateDNA_16SqPCR
15.58954543
templateDNA_16SqPCR_Cq
3784953.448
templateDNA_16SqPCR_copies
human sputum metagenome
title
Week 0
visit
2017-09-11T00:00:00
visit_date
875
vload
32.6
weight
A07
well
-0.74162757
zbmiuk
-1.0182365
zhauk
-0.99621236
zwauk
no
zymo_DNA