MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2000-09-22T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249106
External Id
0.93389869
FEV1FVC
0.433299273
FEV1FVCZ
2.34
FEV1_baseline
103.0609659
FEVpcpred
2.50562501
FVC
0.018334375
FVCZ
100.2432094
FVCpcpred
10593
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:44Z
INSDC first public
2022-11-29T01:24:44Z
INSDC last update
public
INSDC status
20669
RawReads_ASVpipeline
SRS10550518
SRA accession
BSP0139
Submitter Id
no
adm
9.85
ageyart
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
no
attendschool
BSP0139
barcode
806rcbc153
barcode_806R
NCBI
broker name
808
cd4
2017-08-08
collection_date
yes
cotrimoxazole
2010-07-30T00:00:00
dateart
2010-07-18T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
7.03
duryart
['NA', 'not applicable']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
0.2381041
fev1z
Zimbabwe: Harare
geo_loc_name
comparison group
group
Homo sapiens
host
16.8
host_age
23.111717
host_body_mass_index
No HIV-associated chronic lung disease
host_disease
103.0609659
host_height
yes
host_hiv_stat
female
host_sex
C113
host_subject_id
human respiratory
host_tissue_sampled
GTGGGATGTTTC
index_sequence
sputum
isolation_source
17.82 S 31.04 E
lat_lon
yes
one_visit
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
14:30:00
sp05time
no
tbtreat
0.141951581
templateDNA_16SqPCR
20.03538725
templateDNA_16SqPCR_Cq
200127.9914
templateDNA_16SqPCR_copies
human sputum metagenome
title
Week 0
visit
2017-08-08T00:00:00
visit_date
278
vload
49.4
weight
B07
well
0.77911383
zbmiuk
-2.8563294
zhauk
-1.0042351
zwauk
no
zymo_DNA