MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2007-06-06T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249182
External Id
0.855005353
FEV1FVC
-0.433875424
FEV1FVCZ
1.5
FEV1_baseline
101.5680726
FEVpcpred
1.754374981
FVC
0.359785077
FVCZ
104.5066342
FVCpcpred
17323
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:44Z
INSDC first public
2022-11-29T01:24:44Z
INSDC last update
public
INSDC status
34456
RawReads_ASVpipeline
SRS10550538
SRA accession
BYF10CT3
Submitter Id
no
adm
7.03
ageyart
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BYF10CT3
barcode
806rcbc367
barcode_806R
NCBI
broker name
279
cd4
2017-11-27
collection_date
yes
cotrimoxazole
2014-06-15T00:00:00
dateart
2014-06-15T00:00:00
datehiv
3.45
duryart
['NA', 'not applicable']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
0.1258917
fev1z
Malawi: Blantyre
geo_loc_name
comparison group
group
Homo sapiens
host
10.4
host_age
18.343195
host_body_mass_index
No HIV-associated chronic lung disease
host_disease
101.5680726
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
C313
host_subject_id
human respiratory
host_tissue_sampled
ACAATCGGTTGC
index_sequence
sputum
isolation_source
15.77 S 35.02 E
lat_lon
yes
one_visit
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:40:00
sp05time
no
tbtreat
0.020389988
templateDNA_16SqPCR
22.94734023
templateDNA_16SqPCR_Cq
28746.47346
templateDNA_16SqPCR_copies
human sputum metagenome
title
Week 0
visit
2017-11-25T00:00:00
visit_date
18300
vload
31
weight
G09
well
0.80618066
zbmiuk
-1.6948451
zhauk
-0.36630112
zwauk
no
zymo_DNA