MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2002-10-24T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248070
External Id
0.86655503
FEV1FVC
-0.335569141
FEV1FVCZ
1.94
FEV1_baseline
83.24949615
FEVpcpred
2.238749981
FVC
-1.182668158
FVCZ
85.3457913
FVCpcpred
14319
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:50Z
INSDC first public
2022-11-29T01:24:50Z
INSDC last update
public
INSDC status
34233
RawReads_ASVpipeline
SRS10620675
SRA accession
BSP0101
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Abnormal Sat
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
11.56
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0101
barcode
806rcbc257
barcode_806R
NCBI
broker name
514
cd4
2017-06-15
collection_date
no
cotrimoxazole
no
cough_enrl
2014-05-15T00:00:00
dateart
2013-06-15T00:00:00
datehiv
3.09
duryart
2018-11-01T00:00:00
endfollowup
['2018-05-17T00:00:00', '2018-05-17T00:00:00']
endtreatdate
2017-06
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-1.2398455
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
14.6
host_age
16.55233
host_body_mass_index
HIV-associated chronic lung disease
host_disease
83.24949615
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1084
host_subject_id
human respiratory
host_tissue_sampled
TGCTATATCTGG
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-11-01T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:27:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.517513689
templateDNA_16SqPCR
18.00997832
templateDNA_16SqPCR_Cq
729607.7605
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 0
visit
yes
visit012
yes
visit018
yes
visit1218
2017-06-13T00:00:00
visit_date
7
visittotno
1.9395193
vllog
87
vload
36.6
weight
A08
well
-1.3722427
zbmiuk
-2.1922576
zhauk
-2.1621227
zwauk
no
zymo_DNA