MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1997-07-29T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22250762
External Id
0.870308806
FEV1FVC
-0.14151674
FEV1FVCZ
2.289999962
FEV1_baseline
74.43396175
FEVpcpred
2.631249905
FVC
-2.024251503
FVCZ
74.84993438
FVCpcpred
13089
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:47Z
INSDC first public
2022-11-29T01:24:47Z
INSDC last update
public
INSDC status
25194
RawReads_ASVpipeline
SRS10620555
SRA accession
BSP0184
Submitter Id
Not abnormal
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
17.02
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0184
barcode
806rcbc371
barcode_806R
NCBI
broker name
465
cd4
2017-09-18
collection_date
yes
cotrimoxazole
no
cough_enrl
2014-08-04T00:00:00
dateart
2014-06-18T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
2.19
duryart
2018-03-01T00:00:00
endfollowup
['NA', '2017-09-14T00:00:00']
endtreatdate
2016-10
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-1.984027184
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
20.1
host_age
19.982286
host_body_mass_index
HIV-associated chronic lung disease
host_disease
74.43396175
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1025
host_subject_id
human respiratory
host_tissue_sampled
TTGGGCGTGAAC
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-03-01T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R3
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:20:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.095372801
templateDNA_16SqPCR
20.83810525
templateDNA_16SqPCR_Cq
134459.7013
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 48
visit
yes
visit012
yes
visit018
yes
visit1218
2017-09-18T00:00:00
visit_date
7
visittotno
1.80618
vllog
64
vload
50.2
weight
C10
well
-0.91223758
zbmiuk
-2.7096741
zhauk
-2.8286984
zwauk
no
zymo_DNA