MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1998-03-09T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246681
External Id
0.834640287
FEV1FVC
-0.481214397
FEV1FVCZ
3.0599999430000002
FEV1_baseline
82.32002707
FEVpcpred
3.66624999
FVC
-1.221975097
FVCZ
84.76106113
FVCpcpred
6636
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:33Z
INSDC first public
2022-11-29T01:24:33Z
INSDC last update
public
INSDC status
37704
RawReads_ASVpipeline
SRS10548153
SRA accession
BSP0579
Submitter Id
no
acut_exac12m
Adherent
adherence
no
adm
9
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
no
attendschool
BSP0579
barcode
806rcbc34
barcode_806R
NCBI
broker name
2018-12-21
collection_date
yes
cotrimoxazole
no
cough_enrl
2007-03-10T00:00:00
dateart
2007-03-07T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
10.41
duryart
2018-12-21T00:00:00
endfollowup
['NA', '2018-07-10T00:00:00']
endtreatdate
2017-08
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.383121697
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
20.7
host_age
21.129301
host_body_mass_index
HIV-associated chronic lung disease
host_disease
82.32002707
host_height
yes
host_hiv_stat
male
host_sex
B1103
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
CTGCTAACGCAA
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-12-21T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R1
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
08:19:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
1.228071561
templateDNA_16SqPCR
17.29344052
templateDNA_16SqPCR_Cq
1731375.54
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2018-12-21T00:00:00
visit_date
7
visittotno
62.8
weight
C04
well
-0.49144992
zbmiuk
-0.73585582
zhauk
-0.89425248
zwauk
no
zymo_DNA