MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1998-10-30T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246918
External Id
0.676571437
FEV1FVC
-2.627288547
FEV1FVCZ
2.22
FEV1_baseline
66.51893427
FEVpcpred
3.28125
FVC
-1.152066152
FVCZ
85.6521068
FVCpcpred
9366
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:38Z
INSDC first public
2022-11-29T01:24:38Z
INSDC last update
public
INSDC status
30511
RawReads_ASVpipeline
SRS10549159
SRA accession
BYD105T3
Submitter Id
no
acut_exac12m
Adherent
adherence
no
adm
6.03
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BYD105T3
barcode
806rcbc222
barcode_806R
NCBI
broker name
741
cd4
2017-12-07
collection_date
yes
cotrimoxazole
no
cough_enrl
2004-11-08T00:00:00
dateart
12.16
duryart
2018-05-23T00:00:00
endfollowup
['NA', '2018-12-06T00:00:00']
endtreatdate
2017-01
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-2.563006059
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
19.1
host_age
17.777779
host_body_mass_index
HIV-associated chronic lung disease
host_disease
66.51893427
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B3008
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
GCGACTTGTGTA
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-05-23T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
0
nadm
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R1
run_processing_batch
stored in primestore
samp_mat_process
['0.5', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:10:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.230833399
templateDNA_16SqPCR
19.56459633
templateDNA_16SqPCR_Cq
325436.49
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 48
visit
yes
visit012
yes
visit018
yes
visit1218
2017-12-07T00:00:00
visit_date
7
visittotno
0
vllog
0
vload
48.4
weight
F03
well
-1.9320426
zbmiuk
-1.7618465
zhauk
-2.9554086
zwauk
no
zymo_DNA