MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2001-08-31T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246610
External Id
0.820160392
FEV1FVC
-1.316638447
FEV1FVCZ
1.79
FEV1_baseline
68.69772741
FEVpcpred
2.182499886
FVC
-1.899600042
FVCZ
75.48442921
FVCpcpred
10040
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:34Z
INSDC first public
2022-11-29T01:24:34Z
INSDC last update
public
INSDC status
43609
RawReads_ASVpipeline
SRS10548223
SRA accession
BSP0222
Submitter Id
no
acut_exac12m
Adherent
adherence
no
adm
11.54
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0222
barcode
806rcbc186
barcode_806R
NCBI
broker name
808
cd4
2017-10-25
collection_date
no
cotrimoxazole
no
cough_enrl
2013-03-15T00:00:00
dateart
2008-01-25T00:00:00
datehiv
4.61
duryart
2019-03-13T00:00:00
endfollowup
['2018-09-26T00:00:00', '2018-09-26T00:00:00']
endtreatdate
2017-10
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-2.3647611
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
16.1
host_age
26.015799
host_body_mass_index
HIV-associated chronic lung disease
host_disease
68.69772741
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B1144
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
AAGATGGATCAG
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-03-13T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R1
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:20:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
0.016643758
templateDNA_16SqPCR
23.60062129
templateDNA_16SqPCR_Cq
23464.91
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 0
visit
yes
visit012
yes
visit018
yes
visit1218
2017-10-23T00:00:00
visit_date
7
visittotno
2.5797837
vllog
380
vload
63.8
weight
C11
well
1.6206475
zbmiuk
-1.1008632
zhauk
0.90200591
zwauk
no
zymo_DNA