MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2003-03-14T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248080
External Id
0.686346859
FEV1FVC
-2.862362162
FEV1FVCZ
0.930000007
FEV1_baseline
51.27394256
FEVpcpred
1.355000019
FVC
-2.617076489
FVCZ
67.75450722
FVCpcpred
15217
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:50Z
INSDC first public
2022-11-29T01:24:50Z
INSDC last update
public
INSDC status
27948
RawReads_ASVpipeline
SRS10620666
SRA accession
BSP0197
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
3.26
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
yes
attendschool
BSP0197
barcode
806rcbc118
barcode_806R
NCBI
broker name
201
cd4
2017-09-28
collection_date
yes
cotrimoxazole
no
cough_enrl
2006-06-15T00:00:00
dateart
2006-04-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
10.37
duryart
2018-03-14T00:00:00
endfollowup
['NA', '2017-09-27T00:00:00']
endtreatdate
2016-10
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-3.523549413
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
14.5
host_age
15.015006
host_body_mass_index
HIV-associated chronic lung disease
host_disease
51.27394256
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1031
host_subject_id
human respiratory
host_tissue_sampled
GCAGGATAGATA
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-03-14T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
08:56:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
0.119353722
templateDNA_16SqPCR
20.28
templateDNA_16SqPCR_Cq
168268.7887
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 48
visit
yes
visit012
yes
visit018
yes
visit1218
2017-09-28T00:00:00
visit_date
7
visittotno
2.3222194
vllog
210
vload
26.6
weight
G02
well
-2.476774
zbmiuk
-3.9929357
zhauk
-4.1069469
zwauk
no
zymo_DNA