MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2006-07-05T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246888
External Id
0.785224249
FEV1FVC
-1.532919922
FEV1FVCZ
0.93
FEV1_baseline
65.03623162
FEVpcpred
1.184375048
FVC
-2.169116485
FVCZ
73.09724623
FVCpcpred
14668
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:37Z
INSDC first public
2022-11-29T01:24:37Z
INSDC last update
public
INSDC status
48981
RawReads_ASVpipeline
SRS10548920
SRA accession
BYC10BT3
Submitter Id
no
acut_exac12m
Not Adherent
adherence
no
adm
7.92
ageyart
no
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BYC10BT3
barcode
806rcbc354
barcode_806R
NCBI
broker name
795
cd4
2017-02-09
collection_date
yes
cotrimoxazole
no
cough_enrl
2014-06-04T00:00:00
dateart
2014-05-15T00:00:00
datehiv
2.69
duryart
2018-06-27T00:00:00
endfollowup
['NA', 'NA']
endtreatdate
2017-02
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
3
f24mrcscore
-2.7560456
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
10.6
host_age
14.648438
host_body_mass_index
HIV-associated chronic lung disease
host_disease
65.03623162
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B3011
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
TCCGTACCATAA
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-06-27T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
no
one_visit
yes
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R1
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:48:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
0.038837789
templateDNA_16SqPCR
22.25312359
templateDNA_16SqPCR_Cq
54754.79
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 0
visit
no
visit012
yes
visit018
no
visit1218
2017-01-31T00:00:00
visit_date
7
visittotno
3.0791812
vllog
1200
vload
24
weight
B08
well
-1.3305693
zbmiuk
-2.0840068
zhauk
-2.3312023
zwauk
no
zymo_DNA