MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2008-06-08T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249103
External Id
0.888239607
FEV1FVC
-0.043312029
FEV1FVCZ
1.52
FEV1_baseline
116.0593014
FEVpcpred
1.711249948
FVC
1.246615715
FVCZ
116.0374727
FVCpcpred
13659
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:44Z
INSDC first public
2022-11-29T01:24:44Z
INSDC last update
public
INSDC status
25932
RawReads_ASVpipeline
SRS10550512
SRA accession
BSP0098
Submitter Id
E
WRrepeats
E
WRrepeats_BP
no
adm
5.03
ageyart
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0098
barcode
806rcbc143
barcode_806R
NCBI
broker name
355
cd4
2017-06-14
collection_date
yes
cotrimoxazole
2013-06-20T00:00:00
dateart
2010-06-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
3.98
duryart
['NA', 'not applicable']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
1.256531
fev1z
Zimbabwe: Harare
geo_loc_name
comparison group
group
Homo sapiens
host
9
host_age
17.207018
host_body_mass_index
No HIV-associated chronic lung disease
host_disease
116.0593014
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
C101
host_subject_id
human respiratory
host_tissue_sampled
CACATCTAACAC
index_sequence
sputum
isolation_source
17.82 S 31.04 E
lat_lon
yes
one_visit
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
11:08:00
sp05time
no
tbtreat
0.849350527
templateDNA_16SqPCR
17.42927643
templateDNA_16SqPCR_Cq
1197442.212
templateDNA_16SqPCR_copies
human sputum metagenome
title
Week 0
visit
2017-06-14T00:00:00
visit_date
205000
vload
26.8
weight
H05
well
0.63206816
zbmiuk
-1.4750801
zhauk
-0.39363882
zwauk
no
zymo_DNA