MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2002-05-24T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246934
External Id
0.775851006
FEV1FVC
-1.624602454
FEV1FVCZ
1.51
FEV1_baseline
54.74471137
FEVpcpred
1.946249962
FVC
-3.025916832
FVCZ
62.6703373
FVCpcpred
10990
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:36Z
INSDC first public
2022-11-29T01:24:36Z
INSDC last update
public
INSDC status
61309
RawReads_ASVpipeline
SRS10548882
SRA accession
BYD13VT3
Submitter Id
no
acut_exac12m
Not Adherent
adherence
no
adm
8.14
ageyart
no
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BYD13VT3
barcode
806rcbc129
barcode_806R
NCBI
broker name
244
cd4
2018-11-07
collection_date
yes
cotrimoxazole
no
cough_enrl
2010-07-15T00:00:00
dateart
2010-07-15T00:00:00
datehiv
7.39
duryart
2019-04-25T00:00:00
endfollowup
['NA', '2018-11-07T00:00:00']
endtreatdate
2017-12
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-3.316421013
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
16.4
host_age
19.979189
host_body_mass_index
HIV-associated chronic lung disease
host_disease
54.74471137
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B3063
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
CGTGACAATGTC
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-04-25T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
no
one_visit
yes
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R1
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:15:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.004956345
templateDNA_16SqPCR
25.41837723
templateDNA_16SqPCR_Cq
6987.62
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 48
visit
no
visit012
no
visit018
yes
visit1218
2018-11-07T00:00:00
visit_date
7
visittotno
3.4623981
vllog
2900
vload
48
weight
B04
well
-0.098764002
zbmiuk
-2.6689067
zhauk
-1.7977084
zwauk
no
zymo_DNA