MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1999-09-18T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246665
External Id
0.71293131
FEV1FVC
-2.201770171
FEV1FVCZ
2.349999905
FEV1_baseline
66.97903333
FEVpcpred
3.296250105
FVC
-1.48545784
FVCZ
81.52460725
FVCpcpred
15359
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:34Z
INSDC first public
2022-11-29T01:24:34Z
INSDC last update
public
INSDC status
43362
RawReads_ASVpipeline
SRS10548211
SRA accession
BSP0499
Submitter Id
no
acut_exac12m
Adherent
adherence
no
adm
9.08
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
yes
attendschool
BSP0499
barcode
806rcbc152
barcode_806R
NCBI
broker name
211
cd4
2018-08-23
collection_date
yes
cotrimoxazole
no
cough_enrl
2008-10-15T00:00:00
dateart
2008-08-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
8.93
duryart
2019-02-07T00:00:00
endfollowup
['NA', '2018-08-23T00:00:00']
endtreatdate
2017-09
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-2.52462167
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
18.9
host_age
20.331467
host_body_mass_index
HIV-associated chronic lung disease
host_disease
66.97903333
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1123
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
ATGATGACCCGT
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-02-07T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R1
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:23:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
0.034848163
templateDNA_16SqPCR
22.49174286
templateDNA_16SqPCR_Cq
49130.08
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 48
visit
yes
visit012
yes
visit018
yes
visit1218
2018-08-23T00:00:00
visit_date
7
visittotno
1.5910646
vllog
39
vload
58
weight
A07
well
-0.50482094
zbmiuk
-1.2009698
zhauk
-1.3003392
zwauk
no
zymo_DNA