MIGS/MIMS/MIMARKS.host-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2008-09-06T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249040
External Id
0.869565235
FEV1FVC
-0.465630034
FEV1FVCZ
0.5
FEV1_baseline
44.13022548
FEVpcpred
0.574999988
FVC
-4.388688974
FVCZ
45.63951206
FVCpcpred
19156
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:40Z
INSDC first public
2022-11-29T01:24:40Z
INSDC last update
public
INSDC status
38015
RawReads_ASVpipeline
SRS10550363
SRA accession
BYD110T3
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Not Adherent
adherence
no
adm
1.94
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
no
attendschool
BYD110T3
barcode
806rcbc277
barcode_806R
NCBI
broker name
597
cd4
2018-07-23
collection_date
yes
cotrimoxazole
yes
cough_enrl
2010-08-15T00:00:00
dateart
2010-08-15T00:00:00
datehiv
6.95
duryart
2018-12-13T00:00:00
endfollowup
['NA', '2018-06-28T00:00:00']
endtreatdate
2017-07
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-4.33465134
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
9.8
host_age
14.41736
host_body_mass_index
HIV-associated chronic lung disease
host_disease
44.13022548
host_height
yes
host_hiv_stat
male
host_sex
B3031
host_subject_id
human respiratory
host_tissue_sampled
CGAGATACCCAG
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-12-13T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
12:05:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
0.002212223
templateDNA_16SqPCR
26.03300699
templateDNA_16SqPCR_Cq
3118.863884
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 48
visit
yes
visit012
yes
visit018
yes
visit1218
2018-07-23T00:00:00
visit_date
6
visittotno
4.3117537
vllog
20500
vload
19.4
weight
E10
well
-1.322044
zbmiuk
-3.5478125
zhauk
-3.7597742
zwauk
no
zymo_DNA