MIGS/MIMS/MIMARKS.host-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2008-09-06T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249034
External Id
0.837513606
FEV1FVC
-1.085697352
FEV1FVCZ
0.48
FEV1_baseline
47.19391212
FEVpcpred
0.573125005
FVC
-3.857189188
FVCZ
51.17062944
FVCpcpred
17782
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:40Z
INSDC first public
2022-11-29T01:24:40Z
INSDC last update
public
INSDC status
36392
RawReads_ASVpipeline
SRS10550364
SRA accession
BYC10YT3
Submitter Id
Not abnormal
abnhr
Abnormal RR
abnrr
Abnormal Sat
abnsat
no
acut_exac12m
Not Adherent
adherence
no
adm
1.94
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
no
attendschool
BYC10YT3
barcode
806rcbc269
barcode_806R
NCBI
broker name
87
cd4
2017-07-27
collection_date
yes
cotrimoxazole
yes
cough_enrl
2010-08-15T00:00:00
dateart
2010-08-15T00:00:00
datehiv
6.95
duryart
2018-12-13T00:00:00
endfollowup
['2018-06-28T00:00:00', '2018-06-28T00:00:00']
endtreatdate
2017-07
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
4
f24mrcscore
-3.9875319
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
8.8
host_age
14.203393
host_body_mass_index
HIV-associated chronic lung disease
host_disease
47.19391212
host_height
yes
host_hiv_stat
male
host_sex
B3031
host_subject_id
human respiratory
host_tissue_sampled
CCATTCGCCCAT
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-12-13T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['5', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
11:50:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
0.084413619
templateDNA_16SqPCR
20.67795843
templateDNA_16SqPCR_Cq
119009.0871
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 0
visit
yes
visit012
yes
visit018
yes
visit1218
2017-07-20T00:00:00
visit_date
6
visittotno
4.0253057
vllog
10600
vload
17.5
weight
E09
well
-1.2904754
zbmiuk
-3.7646439
zhauk
-4.005836
zwauk
no
zymo_DNA