MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2004-03-24T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246932
External Id
0.793974316
FEV1FVC
-1.644532958
FEV1FVCZ
2.24
FEV1_baseline
83.13765132
FEVpcpred
2.821249962
FVC
-0.452301631
FVCZ
94.08856712
FVCpcpred
17999
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:37Z
INSDC first public
2022-11-29T01:24:37Z
INSDC last update
public
INSDC status
50792
RawReads_ASVpipeline
SRS10548910
SRA accession
BYD13FT3
Submitter Id
no
acut_exac12m
Adherent
adherence
no
adm
8.23
ageyart
no
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BYD13FT3
barcode
806rcbc302
barcode_806R
NCBI
broker name
205
cd4
2019-04-25
collection_date
yes
cotrimoxazole
no
cough_enrl
2012-06-15T00:00:00
dateart
2012-06-15T00:00:00
datehiv
5.94
duryart
2019-04-25T00:00:00
endfollowup
['NA', '2019-04-25T00:00:00']
endtreatdate
2018-05
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.290666383
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
15
host_age
19.40975
host_body_mass_index
HIV-associated chronic lung disease
host_disease
83.13765132
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B3098
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
GGTGAAGATACA
index_sequence
sputum
isolation_source
12 mths
lastvisit
2019-04-25T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
no
one_visit
yes
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R1
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
08:15:00
sp05time
study ended
study_complt_stat
no
tbtreat
0.01889
templateDNA_16SqPCR
23.4
templateDNA_16SqPCR_Cq
26631.74
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 48
visit
yes
visit012
no
visit018
no
visit1218
2019-04-25T00:00:00
visit_date
5
visittotno
4.7363963
vllog
54500
vload
50
weight
F01
well
-0.23781431
zbmiuk
-0.29355249
zhauk
-0.47414532
zwauk
no
zymo_DNA