MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2003-01-04T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246675
External Id
0.857142939
FEV1FVC
-0.479147026
FEV1FVCZ
2.130000114
FEV1_baseline
79.93923109
FEVpcpred
2.484999895
FVC
-1.384918328
FVCZ
82.8190885
FVCpcpred
15424
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:35Z
INSDC first public
2022-11-29T01:24:35Z
INSDC last update
public
INSDC status
39916
RawReads_ASVpipeline
SRS10548235
SRA accession
BSP0545
Submitter Id
no
acut_exac12m
Adherent
adherence
no
adm
6.44
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0545
barcode
806rcbc284
barcode_806R
NCBI
broker name
790
cd4
2018-10-16
collection_date
no
cotrimoxazole
no
cough_enrl
2009-06-15T00:00:00
dateart
2005-05-15T00:00:00
datehiv
8.4
duryart
2019-03-28T00:00:00
endfollowup
['NA', '2018-10-16T00:00:00']
endtreatdate
2017-11
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.488224114
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
15.7
host_age
16.464714
host_body_mass_index
HIV-associated chronic lung disease
host_disease
79.93923109
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1151
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
CGCACATGTTAT
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-03-28T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R1
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:09:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.124293655
templateDNA_16SqPCR
20.48974695
templateDNA_16SqPCR_Cq
175233.27
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 48
visit
yes
visit012
yes
visit018
yes
visit1218
2018-10-16T00:00:00
visit_date
7
visittotno
1.819544
vllog
66
vload
39.2
weight
D11
well
-1.834451
zbmiuk
-2.368901
zhauk
-2.6754255
zwauk
no
zymo_DNA