MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2000-01-09T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249108
External Id
0.905660399
FEV1FVC
0.571688462
FEV1FVCZ
4.11
FEV1_baseline
110.01387
FEVpcpred
4.538125038
FVC
0.409805411
FVCZ
105.1250861
FVCpcpred
11321
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:44Z
INSDC first public
2022-11-29T01:24:44Z
INSDC last update
public
INSDC status
27953
RawReads_ASVpipeline
SRS10550524
SRA accession
BSP0151
Submitter Id
no
adm
13.83
ageyart
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0151
barcode
806rcbc96
barcode_806R
NCBI
broker name
515
cd4
2017-08-25
collection_date
yes
cotrimoxazole
2013-11-07T00:00:00
dateart
2013-10-29T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
3.8
duryart
['NA', 'not applicable']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
0.77705938
fev1z
Zimbabwe: Harare
geo_loc_name
comparison group
group
Homo sapiens
host
17.6
host_age
19.524837
host_body_mass_index
No HIV-associated chronic lung disease
host_disease
110.01387
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
C134
host_subject_id
human respiratory
host_tissue_sampled
GAAGAAGCGGTA
index_sequence
sputum
isolation_source
17.82 S 31.04 E
lat_lon
yes
one_visit
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
11:11:00
sp05time
no
tbtreat
0.120376569
templateDNA_16SqPCR
20.16158466
templateDNA_16SqPCR_Cq
169710.8328
templateDNA_16SqPCR_copies
human sputum metagenome
title
Week 0
visit
2017-08-25T00:00:00
visit_date
2400
vload
60
weight
A12
well
-0.59597272
zbmiuk
-0.21362402
zhauk
-0.69779015
zwauk
no
zymo_DNA