MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2003-02-04T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248062
External Id
0.72682929
FEV1FVC
-2.421316081
FEV1FVCZ
1.49
FEV1_baseline
61.64786265
FEVpcpred
2.049999952
FVC
-1.841885979
FVCZ
76.47594545
FVCpcpred
16381
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:49Z
INSDC first public
2022-11-29T01:24:49Z
INSDC last update
public
INSDC status
37546
RawReads_ASVpipeline
SRS10620628
SRA accession
BSP0073
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Not Adherent
adherence
no
adm
2.5
ageyart
no
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0073
barcode
806rcbc69
barcode_806R
NCBI
broker name
654
cd4
2017-04-13
collection_date
yes
cotrimoxazole
no
cough_enrl
2005-08-04T00:00:00
dateart
2005-06-15T00:00:00
datehiv
11.69
duryart
2018-06-07T00:00:00
endfollowup
['2018-03-13T00:00:00', '2018-03-13T00:00:00']
endtreatdate
2017-04
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-2.8762105
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
14.1
host_age
17.158978
host_body_mass_index
HIV-associated chronic lung disease
host_disease
61.64786265
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B1066
host_subject_id
human respiratory
host_tissue_sampled
CTTGTGTCGATA
index_sequence
sputum
isolation_source
15 mths
lastvisit
2018-06-07T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
yes
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
08:45:00
sp05time
LTFU
study_complt_stat
no
tbtreat
0.023331408
templateDNA_16SqPCR
22.55971079
templateDNA_16SqPCR_Cq
32893.38384
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 0
visit
yes
visit012
no
visit018
no
visit1218
2017-04-11T00:00:00
visit_date
6
visittotno
3.5763414
vllog
3770
vload
40.8
weight
F08
well
-1.0801833
zbmiuk
-0.9308663
zhauk
-1.4253823
zwauk
no
zymo_DNA