MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1999-03-23T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246668
External Id
0.881258948
FEV1FVC
-0.161482389
FEV1FVCZ
3.08
FEV1_baseline
104.7529005
FEVpcpred
3.494999886
FVC
0.38279158
FVCZ
105.1517117
FVCpcpred
17545
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:34Z
INSDC first public
2022-11-29T01:24:34Z
INSDC last update
public
INSDC status
44750
RawReads_ASVpipeline
SRS10548197
SRA accession
BSP0509
Submitter Id
no
adm
16.82
ageyart
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0509
barcode
806rcbc327
barcode_806R
NCBI
broker name
530
cd4
2018-08-28
collection_date
yes
cotrimoxazole
2016-01-15T00:00:00
dateart
2015-11-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
2.62
duryart
['NA', 'not applicable']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
0.36948654
fev1z
Zimbabwe: Harare
geo_loc_name
comparison group
group
Homo sapiens
host
19.4
host_age
24.197702
host_body_mass_index
No HIV-associated chronic lung disease
host_disease
104.7529005
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
C155
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
ACATAACGCCGT
index_sequence
sputum
isolation_source
17.82 S 31.04 E
lat_lon
yes
one_visit
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R1
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
11:40:00
sp05time
no
tbtreat
1.835316221
templateDNA_16SqPCR
16.57484188
templateDNA_16SqPCR_Cq
2587488.96
templateDNA_16SqPCR_copies
human sputum metagenome
title
Week 0
visit
2018-08-28T00:00:00
visit_date
0
vload
65.4
weight
G04
well
0.84831274
zbmiuk
0.12749766
zhauk
0.81814802
zwauk
no
zymo_DNA