MIGS/MIMS/MIMARKS.host-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2002-04-15T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248918
External Id
0.842347586
FEV1FVC
-1.002314273
FEV1FVCZ
1.83
FEV1_baseline
69.76136096
FEVpcpred
2.172499895
FVC
-1.975770174
FVCZ
74.60613389
FVCpcpred
17358
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:41Z
INSDC first public
2022-11-29T01:24:41Z
INSDC last update
public
INSDC status
37083
RawReads_ASVpipeline
SRS10550412
SRA accession
BSP0229
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Not Adherent
adherence
no
adm
7.61
ageyart
no
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0229
barcode
806rcbc382
barcode_806R
NCBI
broker name
801
cd4
2017-11-02
collection_date
no
cotrimoxazole
no
cough_enrl
2009-11-24T00:00:00
dateart
2009-11-24T00:00:00
datehiv
43041
dow
COTRIMOXAZOLE
drug_usage
7.94
duryart
2017-11-02T00:00:00
endfollowup
['2017-11-02T00:00:00', '2017-11-02T00:00:00']
endtreatdate
2017-11
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-2.286633
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
15.5
host_age
17.589767
host_body_mass_index
HIV-associated chronic lung disease
host_disease
69.76136096
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B1148
host_subject_id
human respiratory
host_tissue_sampled
GAGTTGTCACGG
index_sequence
sputum
isolation_source
17.82 S 31.04 E
lat_lon
yes
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['1.5', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:17:00
sp05time
withdrawal
study_complt_stat
no
tbtreat
0.44457397
templateDNA_16SqPCR
18.41495056
templateDNA_16SqPCR_Cq
626774.9542
templateDNA_16SqPCR_copies
human sputum metagenome
title
Refused
treatstopreason
Placebo
trial_arm
Week 0
visit
no
visit012
no
visit018
no
visit1218
2017-10-30T00:00:00
visit_date
0
visittotno
1.60206
vllog
40
vload
43.8
weight
F11
well
-1.1938947
zbmiuk
-0.83008724
zhauk
-1.592209
zwauk
no
zymo_DNA