MIGS/MIMS/MIMARKS.host-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1998-10-29T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248991
External Id
0.924855555
FEV1FVC
0.947958809
FEV1FVCZ
2.900000095
FEV1_baseline
79.27054557
FEVpcpred
3.135624886
FVC
-2.104663679
FVCZ
73.85456767
FVCpcpred
11136
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:41Z
INSDC first public
2022-11-29T01:24:41Z
INSDC last update
public
INSDC status
31897
RawReads_ASVpipeline
SRS10550390
SRA accession
BSP0635
Submitter Id
Not abnormal
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
yes
acut_exac12m
Adherent
adherence
no
adm
15.81
ageyart
yes
all_3
no
antibiotic12m
1
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
no
attendschool
BSP0635
barcode
806rcbc372
barcode_806R
NCBI
broker name
2019-02-18
collection_date
yes
cotrimoxazole
no
cough_enrl
2014-08-21T00:00:00
dateart
2012-08-01T00:00:00
datehiv
3.12
duryart
2019-02-18T00:00:00
endfollowup
['NA', '2018-09-03T00:00:00']
endtreatdate
2017-10
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.61618078
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
20.3
host_age
18.129963
host_body_mass_index
HIV-associated chronic lung disease
host_disease
79.27054557
host_height
yes
host_hiv_stat
male
host_sex
B1130
host_subject_id
human respiratory
host_tissue_sampled
AGTGTTCGATCG
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-02-18T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
R2
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
no
sequencing_controls
no
smoker
09:30:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.05510066
templateDNA_16SqPCR
21.48543245
templateDNA_16SqPCR_Cq
77682.7162
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2019-02-18T00:00:00
visit_date
7
visittotno
4.9268565
vllog
84500
vload
53.2
weight
D10
well
-1.9819344
zbmiuk
-0.87709266
zhauk
-2.3039393
zwauk
no
zymo_DNA