MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2005-04-28T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249140
External Id
0.88775509
FEV1FVC
-0.258565024
FEV1FVCZ
1.74
FEV1_baseline
80.80111878
FEVpcpred
1.960000038
FVC
-1.417700427
FVCZ
81.9321831
FVCpcpred
13557
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:44Z
INSDC first public
2022-11-29T01:24:44Z
INSDC last update
public
INSDC status
36450
RawReads_ASVpipeline
SRS10550510
SRA accession
BYC155T3
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Not Adherent
adherence
no
adm
4.13
ageyart
no
all_3
no
antibiotic12m
0
any3_reasons
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
yes
attendschool
BYC155T3
barcode
806rcbc300
barcode_806R
NCBI
broker name
920
cd4
2018-05-30
collection_date
yes
cotrimoxazole
no
cough_enrl
2009-06-15T00:00:00
dateart
2009-06-15T00:00:00
datehiv
8.96
duryart
2019-05-02T00:00:00
endfollowup
['2019-04-25T00:00:00', '2019-04-25T00:00:00']
endtreatdate
2018-05
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.4663994
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
13
host_age
18.37755
host_body_mass_index
HIV-associated chronic lung disease
host_disease
80.80111878
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B3099
host_subject_id
human respiratory
host_tissue_sampled
TCTGCAGTTGGA
index_sequence
sputum
isolation_source
12 mths
lastvisit
2019-05-02T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
no
one_visit
yes
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['3', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:10:00
sp05time
study ended
study_complt_stat
no
tbtreat
0.145251605
templateDNA_16SqPCR
20.01
templateDNA_16SqPCR_Cq
204780.4732
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 0
visit
yes
visit012
no
visit018
no
visit1218
2018-05-19T00:00:00
visit_date
5
visittotno
4.3541083
vllog
22600
vload
40.8
weight
D01
well
-0.19023515
zbmiuk
-0.97414792
zhauk
-0.67631656
zwauk
no
zymo_DNA