MIGS/MIMS/MIMARKS.host-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2000-11-05T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249021
External Id
0.896860979
FEV1FVC
0.206784952
FEV1FVCZ
1.5
FEV1_baseline
49.72231337
FEVpcpred
1.672500014
FVC
-4.166065838
FVCZ
48.77811299
FVCpcpred
17915
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:42Z
INSDC first public
2022-11-29T01:24:42Z
INSDC last update
public
INSDC status
34689
RawReads_ASVpipeline
SRS10550454
SRA accession
BSP0719
Submitter Id
Abnormal HR
abnhr
Abnormal RR
abnrr
Abnormal Sat
abnsat
yes
acut_exac12m
Not Adherent
adherence
no
adm
10.86
ageyart
yes
all_3
yes
antibiotic12m
2
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0719
barcode
806rcbc73
barcode_806R
NCBI
broker name
2019-07-11
collection_date
yes
cotrimoxazole
no
cough_enrl
2011-09-15T00:00:00
dateart
2010-01-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
6.44
duryart
2019-07-11T00:00:00
endfollowup
['NA', '2018-11-01T00:00:00']
endtreatdate
2018-02
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-3.772034269
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
18.6
host_age
13.13892
host_body_mass_index
HIV-associated chronic lung disease
host_disease
49.72231337
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1183
host_subject_id
human respiratory
host_tissue_sampled
GACGGAACCCAT
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-07-11T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:05:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.935875111
templateDNA_16SqPCR
17.16633745
templateDNA_16SqPCR_Cq
1319427.405
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2019-07-11T00:00:00
visit_date
7
visittotno
32.8
weight
B09
well
-6.1075983
zbmiuk
-2.761965
zhauk
-6.9402657
zwauk
no
zymo_DNA