P
BRrepeats
MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2004-07-23T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246674
External Id
0.851441223
FEV1FVC
-0.507844505
FEV1FVCZ
1.679999948
FEV1_baseline
71.69710331
FEVpcpred
1.973124981
FVC
-2.079357784
FVCZ
74.34097695
FVCpcpred
18136
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:35Z
INSDC first public
2022-11-29T01:24:35Z
INSDC last update
public
INSDC status
44019
RawReads_ASVpipeline
SRS10548231
SRA accession
BSP0542
Submitter Id
no
acut_exac12m
Adherent
adherence
no
adm
5.06
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0542
barcode
806rcbc111
barcode_806R
NCBI
broker name
845
cd4
2018-10-09
collection_date
yes
cotrimoxazole
no
cough_enrl
2009-08-15T00:00:00
dateart
2008-06-15T00:00:00
datehiv
8.23
duryart
2019-03-26T00:00:00
endfollowup
['NA', '2018-10-09T00:00:00']
endtreatdate
2017-11
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-2.083555846
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
14.2
host_age
16.865156
host_body_mass_index
HIV-associated chronic lung disease
host_disease
71.69710331
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1150
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
AGCTTGACAGCT
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-03-26T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
R1
run_processing_batch
stored in primestore
samp_mat_process
['NA', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
completed 18 months
study_complt_stat
no
tbtreat
0.008333
templateDNA_16SqPCR
24.61
templateDNA_16SqPCR_Cq
11748.14
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 48
visit
yes
visit012
yes
visit018
yes
visit1218
2018-10-09T00:00:00
visit_date
7
visittotno
2.3053513
vllog
202
vload
38.2
weight
H01
well
-1.0241781
zbmiuk
-1.6117349
zhauk
-1.5871404
zwauk
no
zymo_DNA