MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2005-05-22T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246945
External Id
0.743184133
FEV1FVC
-2.270180563
FEV1FVCZ
1.38
FEV1_baseline
63.85479146
FEVpcpred
1.856874943
FVC
-1.759764819
FVCZ
77.6127202
FVCpcpred
16626
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:38Z
INSDC first public
2022-11-29T01:24:38Z
INSDC last update
public
INSDC status
40379
RawReads_ASVpipeline
SRS10548927
SRA accession
BYE105T3
Submitter Id
yes
acut_exac12m
Not Adherent
adherence
no
adm
7.45
ageyart
yes
all_3
no
antibiotic12m
1
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BYE105T3
barcode
806rcbc178
barcode_806R
NCBI
broker name
2018-10-29
collection_date
yes
cotrimoxazole
yes
cough_enrl
2012-11-02T00:00:00
dateart
2012-08-04T00:00:00
datehiv
4.46
duryart
2018-10-29T00:00:00
endfollowup
['NA', 'NA']
endtreatdate
2017-04
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
3
f24mrcscore
-2.716828649
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
13.4
host_age
19.905041
host_body_mass_index
HIV-associated chronic lung disease
host_disease
63.85479146
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B3021
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
AGCAAACACCCG
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-10-29T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
0
nadm
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R1
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:30:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.201007601
templateDNA_16SqPCR
19.86220818
templateDNA_16SqPCR_Cq
283387.1
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2018-10-29T00:00:00
visit_date
6
visittotno
43.6
weight
C10
well
0.33053911
zbmiuk
-1.385057
zhauk
-0.51918542
zwauk
no
zymo_DNA