MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2004-10-05T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248093
External Id
0.872150618
FEV1FVC
-0.602186785
FEV1FVCZ
1.649999976
FEV1_baseline
81.92648176
FEVpcpred
1.891875029
FVC
-1.159741382
FVCZ
85.14692022
FVCpcpred
13246
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:49Z
INSDC first public
2022-11-29T01:24:49Z
INSDC last update
public
INSDC status
30498
RawReads_ASVpipeline
SRS10620619
SRA accession
BSP0276
Submitter Id
Abnormal HR
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
6.96
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0276
barcode
806rcbc116
barcode_806R
NCBI
broker name
508
cd4
2018-01-23
collection_date
yes
cotrimoxazole
yes
cough_enrl
2011-09-21T00:00:00
dateart
2011-03-02T00:00:00
datehiv
AMOXYL
drug_usage
5.42
duryart
2018-07-10T00:00:00
endfollowup
['NA', '2018-01-23T00:00:00']
endtreatdate
2017-02
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.381751368
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
13.2
host_age
17.967924
host_body_mass_index
HIV-associated chronic lung disease
host_disease
81.92648176
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B1055
host_subject_id
human respiratory
host_tissue_sampled
GAATGATGAGTG
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-07-10T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
AMOXYL
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:00:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.022188207
templateDNA_16SqPCR
22.72
templateDNA_16SqPCR_Cq
31281.66117
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 48
visit
yes
visit012
yes
visit018
yes
visit1218
2018-01-23T00:00:00
visit_date
7
visittotno
3.5877109
vllog
3870
vload
37
weight
E02
well
-0.43268907
zbmiuk
-1.9444733
zhauk
-1.4306079
zwauk
no
zymo_DNA