MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2007-08-29T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246938
External Id
0.98588894
FEV1FVC
1.815291548
FEV1FVCZ
1.31
FEV1_baseline
81.29814391
FEVpcpred
1.328750014
FVC
-2.055712684
FVCZ
74.27221394
FVCpcpred
13077
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:37Z
INSDC first public
2022-11-29T01:24:37Z
INSDC last update
public
INSDC status
41494
RawReads_ASVpipeline
SRS10548894
SRA accession
BYD14DT3
Submitter Id
no
acut_exac12m
Adherent
adherence
no
adm
9.07
ageyart
no
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BYD14DT3
barcode
806rcbc273
barcode_806R
NCBI
broker name
1321
cd4
2019-01-28
collection_date
yes
cotrimoxazole
no
cough_enrl
2016-09-21T00:00:00
dateart
2016-09-21T00:00:00
datehiv
1.43
duryart
2019-04-24T00:00:00
endfollowup
['NA', '2019-01-28T00:00:00']
endtreatdate
2018-02
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-1.429914796
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
11.4
host_age
16.930273
host_body_mass_index
HIV-associated chronic lung disease
host_disease
81.29814391
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B3079
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
TGAGTTCGCTAT
index_sequence
sputum
isolation_source
15 mths
lastvisit
2019-04-24T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
no
one_visit
yes
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R1
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:20:00
sp05time
study ended
study_complt_stat
no
tbtreat
0.00821366
templateDNA_16SqPCR
24.54999549
templateDNA_16SqPCR_Cq
11579.89
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 48
visit
yes
visit012
no
visit018
no
visit1218
2019-01-28T00:00:00
visit_date
6
visittotno
0
vllog
0
vload
30.4
weight
A10
well
-0.37447691
zbmiuk
-1.770249
zhauk
-1.1967001
zwauk
no
zymo_DNA