MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1999-01-07T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22250763
External Id
0.638036788
FEV1FVC
-3.123230717
FEV1FVCZ
1.039999962
FEV1_baseline
38.94218364
FEVpcpred
1.629999995
FVC
-3.711492893
FVCZ
54.26555336
FVCpcpred
24185
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:47Z
INSDC first public
2022-11-29T01:24:47Z
INSDC last update
public
INSDC status
41065
RawReads_ASVpipeline
SRS10620533
SRA accession
BSP0209
Submitter Id
Not abnormal
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
12.21
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0209
barcode
806rcbc65
barcode_806R
NCBI
broker name
749
cd4
2017-10-06
collection_date
no
cotrimoxazole
no
cough_enrl
2011-03-25T00:00:00
dateart
2009-06-12T00:00:00
datehiv
5.62
duryart
2018-03-23T00:00:00
endfollowup
['NA', '2017-10-06T00:00:00']
endtreatdate
2016-11
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-4.530068017
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
18.7
host_age
15.659781
host_body_mass_index
HIV-associated chronic lung disease
host_disease
38.94218364
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1033
host_subject_id
human respiratory
host_tissue_sampled
GAAGTTGGAAGT
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-03-23T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R3
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:30:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
0.07638493
templateDNA_16SqPCR
21.41282112
templateDNA_16SqPCR_Cq
107689.9779
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 48
visit
yes
visit012
yes
visit018
yes
visit1218
2017-10-06T00:00:00
visit_date
7
visittotno
3.2718415
vllog
1870
vload
35
weight
B08
well
-3.4171035
zbmiuk
-3.981189
zhauk
-6.2180729
zwauk
no
zymo_DNA