MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2002-08-22T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246930
External Id
0.794685237
FEV1FVC
-1.581615333
FEV1FVCZ
1.57
FEV1_baseline
75.85509624
FEVpcpred
1.975625038
FVC
-1.062116733
FVCZ
86.80304676
FVCpcpred
18292
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:36Z
INSDC first public
2022-11-29T01:24:36Z
INSDC last update
public
INSDC status
44312
RawReads_ASVpipeline
SRS10548878
SRA accession
BYD11FT3
Submitter Id
AAL
WRrepeats
AAL
WRrepeats_WP
no
acut_exac12m
Not Adherent
adherence
no
adm
4.81
ageyart
no
all_3
no
antibiotic12m
0
any3_reasons
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
yes
attendschool
BYD11FT3
barcode
806rcbc305
barcode_806R
NCBI
broker name
810
cd4
2018-09-19
collection_date
yes
cotrimoxazole
no
cough_enrl
2007-06-15T00:00:00
dateart
2007-06-15T00:00:00
datehiv
10.34
duryart
2018-09-19T00:00:00
endfollowup
['NA', '2018-09-19T00:00:00']
endtreatdate
2017-10
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-1.791603333
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
16
host_age
16.516596
host_body_mass_index
HIV-associated chronic lung disease
host_disease
75.85509624
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B3055
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
AGTTAGTGCGTC
index_sequence
sputum
isolation_source
12 mths
lastvisit
2018-09-19T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
no
one_visit
yes
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R1
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:30:00
sp05time
study ended
study_complt_stat
no
tbtreat
0.2091
templateDNA_16SqPCR
19.85
templateDNA_16SqPCR_Cq
294796.03
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 48
visit
yes
visit012
no
visit018
no
visit1218
2018-09-19T00:00:00
visit_date
5
visittotno
1.5910646
vllog
39
vload
31
weight
A02
well
-1.9002268
zbmiuk
-4.8393173
zhauk
-4.7300706
zwauk
no
zymo_DNA