MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2000-08-14T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246955
External Id
0.842947679
FEV1FVC
-0.978363269
FEV1FVCZ
1.58
FEV1_baseline
67.26161899
FEVpcpred
1.874374986
FVC
-2.159160131
FVCZ
71.96957238
FVCpcpred
17595
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:38Z
INSDC first public
2022-11-29T01:24:38Z
INSDC last update
public
INSDC status
42123
RawReads_ASVpipeline
SRS10548932
SRA accession
BYE12MT3
Submitter Id
no
acut_exac12m
Adherent
adherence
no
adm
9.34
ageyart
no
all_3
no
antibiotic12m
0
any3_reasons
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
yes
attendschool
BYE12MT3
barcode
806rcbc193
barcode_806R
NCBI
broker name
2018-12-12
collection_date
yes
cotrimoxazole
yes
cough_enrl
2009-12-15T00:00:00
dateart
2009-12-01T00:00:00
datehiv
7.61
duryart
2018-12-12T00:00:00
endfollowup
['NA', '2018-06-25T00:00:00']
endtreatdate
2017-07
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
3
f24mrcscore
-2.467781596
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
18.3
host_age
18.900658
host_body_mass_index
HIV-associated chronic lung disease
host_disease
67.26161899
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B3028
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
TAACTCTGATGC
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-12-12T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
no
one_visit
yes
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R1
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:30:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
1.622652743
templateDNA_16SqPCR
16.72827878
templateDNA_16SqPCR_Cq
2287669.02
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 72
visit
no
visit012
yes
visit018
no
visit1218
2018-12-12T00:00:00
visit_date
7
visittotno
41.4
weight
B12
well
-1.0143524
zbmiuk
-2.5820153
zhauk
-2.5847681
zwauk
no
zymo_DNA