MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2002-05-22T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249168
External Id
0.667069515
FEV1FVC
-2.870371582
FEV1FVCZ
1.38
FEV1_baseline
50.04228764
FEVpcpred
2.068749905
FVC
-2.695307564
FVCZ
66.68574464
FVCpcpred
20649
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:43Z
INSDC first public
2022-11-29T01:24:43Z
INSDC last update
public
INSDC status
36186
RawReads_ASVpipeline
SRS10550480
SRA accession
BYE11KT3
Submitter Id
AAT
WRrepeats
AAT
WRrepeats_WP
yes
acut_exac12m
Adherent
adherence
yes
adm
no
all_3
no
antibiotic12m
1
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BYE11KT3
barcode
806rcbc158
barcode_806R
NCBI
broker name
2019-04-29
collection_date
yes
cotrimoxazole
no
cough_enrl
2019-04-29T00:00:00
endfollowup
['NA', '2018-11-07T00:00:00']
endtreatdate
2017-12
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
-3.668068201
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
16.9
host_age
15.601282
host_body_mass_index
HIV-associated chronic lung disease
host_disease
50.04228764
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B3064
host_subject_id
human respiratory
host_tissue_sampled
CCTCTCGTGATC
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-04-29T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
1
nadm
no
one_visit
yes
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:50:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.451579437
templateDNA_16SqPCR
18.34951246
templateDNA_16SqPCR_Cq
636651.4917
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 72
visit
no
visit012
no
visit018
yes
visit1218
2019-04-29T00:00:00
visit_date
7
visittotno
37
weight
G07
well
-2.8957171
zbmiuk
-3.0180335
zhauk
-4.2592359
zwauk
no
zymo_DNA