MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2006-11-03T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246940
External Id
0.887656103
FEV1FVC
-0.066765941
FEV1FVCZ
1.2
FEV1_baseline
81.39361241
FEVpcpred
1.351874948
FVC
-1.463304558
FVCZ
81.94030295
FVCpcpred
14900
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:37Z
INSDC first public
2022-11-29T01:24:37Z
INSDC last update
public
INSDC status
49941
RawReads_ASVpipeline
SRS10548900
SRA accession
BYD14IT3
Submitter Id
no
acut_exac12m
Not Adherent
adherence
no
all_3
no
antibiotic12m
0
any3_reasons
BYD14IT3
barcode
806rcbc23
barcode_806R
NCBI
broker name
1064
cd4
2019-03-06
collection_date
['NA', 'missing']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
3
f24mrcscore
-1.429390658
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
12.3
host_age
15.25203
host_body_mass_index
HIV-associated chronic lung disease
host_disease
81.39361241
host_height
yes
host_hiv_stat
B3087
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
GGATGGTGTTGC
index_sequence
sputum
isolation_source
15.77 S 35.02 E
lat_lon
no
one_visit
yes
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R1
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:20:00
sp05time
0.09007
templateDNA_16SqPCR
21.09
templateDNA_16SqPCR_Cq
126983.64
templateDNA_16SqPCR_copies
human sputum metagenome
title
Azithromycin
trial_arm
Week 48
visit
yes
visit012
no
visit018
no
visit1218
2019-03-06T00:00:00
visit_date
0
vllog
0
vload
24.6
weight
H02
well
-1.4327124
zbmiuk
-3.150255
zhauk
-3.2193408
zwauk
no
zymo_DNA