MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2009-08-15T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249165
External Id
0.850982248
FEV1FVC
-0.655638911
FEV1FVCZ
1.11
FEV1_baseline
87.3004498
FEVpcpred
1.304375052
FVC
-0.687110083
FVCZ
91.31640159
FVCpcpred
16390
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:44Z
INSDC first public
2022-11-29T01:24:44Z
INSDC last update
public
INSDC status
32557
RawReads_ASVpipeline
SRS10550504
SRA accession
BYD14QT3
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
all_3
no
antibiotic12m
0
any3_reasons
BYD14QT3
barcode
806rcbc204
barcode_806R
NCBI
broker name
820
cd4
2019-03-21
collection_date
['NA', 'missing']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-1.002480305
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
9.5
host_age
14.660558
host_body_mass_index
HIV-associated chronic lung disease
host_disease
87.3004498
host_height
yes
host_hiv_stat
B3092
host_subject_id
human respiratory
host_tissue_sampled
TAAAGTCACCCT
index_sequence
sputum
isolation_source
15.77 S 35.02 E
lat_lon
no
one_visit
yes
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:47:00
sp05time
0.007754763
templateDNA_16SqPCR
24.24
templateDNA_16SqPCR_Cq
10932.91888
templateDNA_16SqPCR_copies
human sputum metagenome
title
Azithromycin
trial_arm
Week 48
visit
yes
visit012
no
visit018
no
visit1218
2019-03-21T00:00:00
visit_date
2.9222062
vllog
836
vload
22
weight
D01
well
-1.064008
zbmiuk
-2.2973471
zhauk
-2.3391361
zwauk
no
zymo_DNA