MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2004-05-10T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246658
External Id
0.878374219
FEV1FVC
-0.074388416
FEV1FVCZ
1.81
FEV1_baseline
77.73964168
FEVpcpred
2.060625076
FVC
-1.768137856
FVCZ
78.15630439
FVCpcpred
7456
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:33Z
INSDC first public
2022-11-29T01:24:33Z
INSDC last update
public
INSDC status
18657
RawReads_ASVpipeline
SRS10548168
SRA accession
BSP0469
Submitter Id
no
acut_exac12m
Not Adherent
adherence
no
adm
6.31
ageyart
no
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0469
barcode
806rcbc60
barcode_806R
NCBI
broker name
20
cd4
2018-08-01
collection_date
yes
cotrimoxazole
no
cough_enrl
2010-08-31T00:00:00
dateart
2010-05-15T00:00:00
datehiv
43481
dow
COTRIMOXAZOLE
drug_usage
7.92
duryart
2019-01-16T00:00:00
endfollowup
['NA', 'NA']
endtreatdate
2018-08
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.6457114
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
14.2
host_age
18.020409
host_body_mass_index
HIV-associated chronic lung disease
host_disease
77.73964168
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1229
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
GTCAATTGACCG
index_sequence
sputum
isolation_source
3 mths
lastvisit
2018-10-24T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
yes
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R1
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:20:00
sp05time
withdrawal
study_complt_stat
yes
tbtreat
0.151205279
templateDNA_16SqPCR
20.33204935
templateDNA_16SqPCR_Cq
213174.16
templateDNA_16SqPCR_copies
human sputum metagenome
title
Refused
treatstopreason
Azithromycin
trial_arm
Week 0
visit
no
visit012
no
visit018
no
visit1218
2018-07-20T00:00:00
visit_date
2
visittotno
6.2095151
vllog
1620000
vload
40.6
weight
E07
well
-0.3848764
zbmiuk
-1.6715178
zhauk
-1.2391415
zwauk
no
zymo_DNA