MIGS/MIMS/MIMARKS.host-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2010-07-21T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249013
External Id
0.954248409
FEV1FVC
0.93458125
FEV1FVCZ
0.730000019
FEV1_baseline
66.32328646
FEVpcpred
0.764999986
FVC
-2.938345794
FVCZ
62.67725999
FVCpcpred
16406
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:42Z
INSDC first public
2022-11-29T01:24:42Z
INSDC last update
public
INSDC status
34898
RawReads_ASVpipeline
SRS10550437
SRA accession
BSP0696
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
4.9
ageyart
yes
all_3
yes
antibiotic12m
1
any3_reasons
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
no
attendschool
BSP0696
barcode
806rcbc271
barcode_806R
NCBI
broker name
2019-06-18
collection_date
yes
cotrimoxazole
no
cough_enrl
2015-06-15T00:00:00
dateart
2014-06-20T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
2.63
duryart
2019-06-18T00:00:00
endfollowup
['NA', '2019-01-09T00:00:00']
endtreatdate
2018-01
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-2.572522437
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
8.9
host_age
14.09269
host_body_mass_index
HIV-associated chronic lung disease
host_disease
66.32328646
host_height
yes
host_hiv_stat
male
host_sex
B1166
host_subject_id
human respiratory
host_tissue_sampled
ACCCGTATGATG
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-06-18T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:56:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.01365792
templateDNA_16SqPCR
23.35621166
templateDNA_16SqPCR_Cq
19255.38265
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2019-06-18T00:00:00
visit_date
7
visittotno
18.8
weight
G09
well
-1.389383
zbmiuk
-2.9991395
zhauk
-3.2769802
zwauk
no
zymo_DNA