MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2002-04-18T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246659
External Id
0.863689311
FEV1FVC
-0.686517844
FEV1FVCZ
2.78
FEV1_baseline
108.0975113
FEVpcpred
3.21875
FVC
0.962785087
FVCZ
112.8722568
FVCpcpred
16507
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:34Z
INSDC first public
2022-11-29T01:24:34Z
INSDC last update
public
INSDC status
41725
RawReads_ASVpipeline
SRS10548196
SRA accession
BSP0470
Submitter Id
no
adm
12.79
ageyart
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0470
barcode
806rcbc127
barcode_806R
NCBI
broker name
992
cd4
2018-08-01
collection_date
yes
cotrimoxazole
2015-02-02T00:00:00
dateart
2015-01-28T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
3.49
duryart
['NA', 'not applicable']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
0.63228977
fev1z
Zimbabwe: Harare
geo_loc_name
comparison group
group
Homo sapiens
host
16.2
host_age
21.257017
host_body_mass_index
No HIV-associated chronic lung disease
host_disease
108.0975113
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
C152
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
GGTCAGCTTAAC
index_sequence
sputum
isolation_source
17.82 S 31.04 E
lat_lon
yes
one_visit
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R1
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
12:28:00
sp05time
no
tbtreat
0.364618624
templateDNA_16SqPCR
18.9685973
templateDNA_16SqPCR_Cq
514051.29
templateDNA_16SqPCR_copies
human sputum metagenome
title
Week 0
visit
2018-08-01T00:00:00
visit_date
0
vload
51.4
weight
H03
well
0.2554338
zbmiuk
-1.2931216
zhauk
-0.60776818
zwauk
no
zymo_DNA