MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2000-09-03T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248100
External Id
0.94026482
FEV1FVC
0.67143086
FEV1FVCZ
1.820000052
FEV1_baseline
72.06062894
FEVpcpred
1.935624957
FVC
-2.404401697
FVCZ
68.99658888
FVCpcpred
21372
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:50Z
INSDC first public
2022-11-29T01:24:50Z
INSDC last update
public
INSDC status
44799
RawReads_ASVpipeline
SRS10620658
SRA accession
BSP0327
Submitter Id
Not abnormal
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
4.78
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
yes
attendschool
BSP0327
barcode
806rcbc56
barcode_806R
NCBI
broker name
2018-03-02
collection_date
yes
cotrimoxazole
yes
cough_enrl
2005-06-15T00:00:00
dateart
2005-02-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
11.33
duryart
2018-03-02T00:00:00
endfollowup
['NA', '2017-09-15T00:00:00']
endtreatdate
2016-10
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-2.116940059
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
17.4
host_age
18.443316
host_body_mass_index
HIV-associated chronic lung disease
host_disease
72.06062894
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B1026
host_subject_id
human respiratory
host_tissue_sampled
AGTAGAGGGATG
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-03-02T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
08:41:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.005226296
templateDNA_16SqPCR
24.74492659
templateDNA_16SqPCR_Cq
7368.203684
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2018-03-02T00:00:00
visit_date
7
visittotno
43.4
weight
A07
well
-1.1198977
zbmiuk
-1.674078
zhauk
-2.1069639
zwauk
no
zymo_DNA