MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1999-02-12T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246731
External Id
0.757816124
FEV1FVC
-1.910009189
FEV1FVCZ
2.029999971
FEV1_baseline
78.80132834
FEVpcpred
2.678750038
FVC
-0.568147176
FVCZ
92.41666782
FVCpcpred
17600
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:33Z
INSDC first public
2022-11-29T01:24:33Z
INSDC last update
public
INSDC status
42784
RawReads_ASVpipeline
SRS10548174
SRA accession
BSP0736
Submitter Id
AZ
WRrepeats
AZ
WRrepeats_WP
no
acut_exac12m
Adherent
adherence
no
adm
7.59
ageyart
no
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
no
attendschool
BSP0736
barcode
806rcbc158
barcode_806R
NCBI
broker name
497
cd4
2019-08-06
collection_date
yes
cotrimoxazole
no
cough_enrl
2006-09-15T00:00:00
dateart
2006-08-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
11.97
duryart
2019-08-06T00:00:00
endfollowup
['NA', '2019-08-06T00:00:00']
endtreatdate
2018-09
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.61120024
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
20.4
host_age
24.800745
host_body_mass_index
HIV-associated chronic lung disease
host_disease
78.80132834
host_height
yes
host_hiv_stat
female
host_sex
B1241
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
CCTCTCGTGATC
index_sequence
sputum
isolation_source
12 mths
lastvisit
2019-08-06T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
yes
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R1
run_processing_batch
stored in primestore
samp_mat_process
['1.5', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:45:00
sp05time
study ended
study_complt_stat
no
tbtreat
0.739088701
templateDNA_16SqPCR
17.90833654
templateDNA_16SqPCR_Cq
1041991.47
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 48
visit
yes
visit012
no
visit018
no
visit1218
2019-08-06T00:00:00
visit_date
5
visittotno
0
vllog
0
vload
59.2
weight
G07
well
0.94306606
zbmiuk
-1.5156404
zhauk
0.12651594
zwauk
no
zymo_DNA