MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1999-05-13T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246643
External Id
0.879021635
FEV1FVC
-0.34713227
FEV1FVCZ
2.92
FEV1_baseline
118.1286072
FEVpcpred
3.321875095
FVC
1.500721448
FVCZ
120.4266511
FVCpcpred
16112
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:34Z
INSDC first public
2022-11-29T01:24:33Z
INSDC last update
public
INSDC status
42735
RawReads_ASVpipeline
SRS10548189
SRA accession
BSP0427
Submitter Id
no
adm
11.45
ageyart
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
no
attendschool
BSP0427
barcode
806rcbc263
barcode_806R
NCBI
broker name
713
cd4
2018-06-22
collection_date
no
cotrimoxazole
2010-10-25T00:00:00
dateart
2007-06-15T00:00:00
datehiv
7.66
duryart
['NA', 'not applicable']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
1.4234422
fev1z
Zimbabwe: Harare
geo_loc_name
comparison group
group
Homo sapiens
host
19.1
host_age
20.477295
host_body_mass_index
No HIV-associated chronic lung disease
host_disease
118.1286072
host_height
yes
host_hiv_stat
female
host_sex
C137
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
AACGGCAGCATC
index_sequence
sputum
isolation_source
17.82 S 31.04 E
lat_lon
yes
one_visit
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
rs14antib
R1
run_processing_batch
stored in primestore
samp_mat_process
['1.5', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
11:29:00
sp05time
no
tbtreat
0.073039843
templateDNA_16SqPCR
21.28426982
templateDNA_16SqPCR_Cq
102973.96
templateDNA_16SqPCR_copies
human sputum metagenome
title
Week 0
visit
2018-06-22T00:00:00
visit_date
0
vload
47
weight
G08
well
-0.40347627
zbmiuk
-2.0084174
zhauk
-1.5778122
zwauk
no
zymo_DNA