E
BRrepeats
MIGS/MIMS/MIMARKS.host-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2002-11-09T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248917
External Id
0.834862384
FEV1FVC
-1.208759823
FEV1FVCZ
1.82
FEV1_baseline
82.56368571
FEVpcpred
2.180000067
FVC
-0.765696411
FVCZ
90.03772389
FVCpcpred
13269
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:41Z
INSDC first public
2022-11-29T01:24:41Z
INSDC last update
public
INSDC status
28942
RawReads_ASVpipeline
SRS10550409
SRA accession
BSP0225
Submitter Id
Not abnormal
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
10.78
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0225
barcode
806rcbc279
barcode_806R
NCBI
broker name
551
cd4
2017-10-31
collection_date
yes
cotrimoxazole
yes
cough_enrl
2013-08-19T00:00:00
dateart
2013-06-13T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
4.2
duryart
2019-04-04T00:00:00
endfollowup
['2018-10-02T00:00:00', '2018-10-02T00:00:00']
endtreatdate
2017-10
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.3339082
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
14.9
host_age
16.842546
host_body_mass_index
HIV-associated chronic lung disease
host_disease
82.56368571
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B1147
host_subject_id
human respiratory
host_tissue_sampled
AGTTTGCAACGC
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-04-04T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
08:41:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
0.069915549
templateDNA_16SqPCR
20.95567842
templateDNA_16SqPCR_Cq
98569.23262
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 0
visit
yes
visit012
yes
visit018
yes
visit1218
2017-10-26T00:00:00
visit_date
7
visittotno
4.6344771
vllog
43100
vload
36
weight
G10
well
-1.4656416
zbmiuk
-2.5554228
zhauk
-2.8184445
zwauk
no
zymo_DNA