MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2001-04-15T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22108594
External Id
0.895328535
FEV1FVC
-0.109655239
FEV1FVCZ
2.24
FEV1_baseline
80.78355482
FEVpcpred
2.501874924
FVC
-1.465912017
FVCZ
80.97638782
FVCpcpred
9653
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:29Z
INSDC first public
2022-11-29T01:24:29Z
INSDC last update
public
INSDC status
32941
RawReads_ASVpipeline
SRS10483906
SRA accession
BSP0092
Submitter Id
no
acut_exac12m
Adherent
adherence
no
adm
8.17
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0092
barcode
806rcbc93
barcode_806R
NCBI
broker name
601
cd4
2017-05-31
collection_date
no
cotrimoxazole
no
cough_enrl
2009-06-16T00:00:00
dateart
2007-10-12T00:00:00
datehiv
7.96
duryart
2018-10-17T00:00:00
endfollowup
['2018-05-02T00:00:00', '2018-05-02T00:00:00']
endtreatdate
2017-05
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-1.4680216
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
16.1
host_age
22.83062
host_body_mass_index
HIV-associated chronic lung disease
host_disease
80.78355482
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B1079
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
CCACCTACTCCA
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-10-17T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R1
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:38:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
1.453220358
templateDNA_16SqPCR
17.04923191
templateDNA_16SqPCR_Cq
2048797.69
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 0
visit
yes
visit012
yes
visit018
yes
visit1218
2017-05-24T00:00:00
visit_date
7
visittotno
2.5415792
vllog
348
vload
59.4
weight
F11
well
0.79361093
zbmiuk
-0.32647675
zhauk
0.43374562
zwauk
no
zymo_DNA