MIGS/MIMS/MIMARKS.host-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2000-09-04T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249029
External Id
0.888416556
FEV1FVC
0.040092914
FEV1FVCZ
2.09
FEV1_baseline
72.93813541
FEVpcpred
2.352499962
FVC
-2.208067188
FVCZ
72.6692408
FVCpcpred
17306
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:39Z
INSDC first public
2022-11-29T01:24:39Z
INSDC last update
public
INSDC status
31852
RawReads_ASVpipeline
SRS10550346
SRA accession
BYC10ET3
Submitter Id
Not abnormal
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
no
acut_exac12m
Not Adherent
adherence
no
adm
8.55
ageyart
no
all_3
no
antibiotic12m
0
any3_reasons
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
yes
attendschool
BYC10ET3
barcode
806rcbc189
barcode_806R
NCBI
broker name
448
cd4
2017-02-15
collection_date
yes
cotrimoxazole
yes
cough_enrl
2009-03-23T00:00:00
dateart
2008-10-10T00:00:00
datehiv
7.9
duryart
2018-03-07T00:00:00
endfollowup
['NA', 'NA']
endtreatdate
2017-02
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-2.0124285
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
16.4
host_age
21.526833
host_body_mass_index
HIV-associated chronic lung disease
host_disease
72.93813541
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B3014
host_subject_id
human respiratory
host_tissue_sampled
CCAAGTCTTACA
index_sequence
sputum
isolation_source
unscheduled
lastvisit
2018-03-07T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
no
one_visit
yes
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['10', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
12:05:00
sp05time
LTFU
study_complt_stat
no
tbtreat
0.245487311
templateDNA_16SqPCR
19.23740133
templateDNA_16SqPCR_Cq
346096.0565
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 0
visit
yes
visit012
no
visit018
no
visit1218
2017-02-08T00:00:00
visit_date
5
visittotno
3.8785217
vllog
7560
vload
53.4
weight
F11
well
0.51581168
zbmiuk
-2.3270552
zhauk
-1.0427167
zwauk
no
zymo_DNA