MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2009-07-05T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248069
External Id
0.96068619
FEV1FVC
1.056725834
FEV1FVCZ
0.84
FEV1_baseline
74.33031909
FEVpcpred
0.874374986
FVC
-2.320774997
FVCZ
69.66132987
FVCpcpred
19252
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:50Z
INSDC first public
2022-11-29T01:24:50Z
INSDC last update
public
INSDC status
35583
RawReads_ASVpipeline
SRS10620676
SRA accession
BSP0086
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Not Adherent
adherence
no
adm
1.07
ageyart
no
all_3
no
antibiotic12m
0
any3_reasons
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
yes
attendschool
BSP0086
barcode
806rcbc233
barcode_806R
NCBI
broker name
554
cd4
2017-05-22
collection_date
yes
cotrimoxazole
no
cough_enrl
2010-08-01T00:00:00
dateart
2010-07-15T00:00:00
datehiv
42892
dow
COTRIMOXAZOLE
drug_usage
6.81
duryart
2017-06-06T00:00:00
endfollowup
['2017-05-22T00:00:00', '2017-05-22T00:00:00']
endtreatdate
2017-05
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.8839391
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
7.8
host_age
14.844878
host_body_mass_index
HIV-associated chronic lung disease
host_disease
74.33031909
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1075
host_subject_id
human respiratory
host_tissue_sampled
GCTAATTACGCT
index_sequence
sputum
isolation_source
17.82 S 31.04 E
lat_lon
yes
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
08:43:00
sp05time
withdrawal
study_complt_stat
no
tbtreat
0.004096962
templateDNA_16SqPCR
25.12681148
templateDNA_16SqPCR_Cq
5776.030883
templateDNA_16SqPCR_copies
human sputum metagenome
title
Refused
treatstopreason
Placebo
trial_arm
Week 0
visit
no
visit012
no
visit018
no
visit1218
2017-05-17T00:00:00
visit_date
0
visittotno
2.2576785
vllog
181
vload
20.6
weight
A05
well
-0.62483758
zbmiuk
-1.7172655
zhauk
-1.5857641
zwauk
no
zymo_DNA