MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2002-04-10T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22250724
External Id
0.792079172
FEV1FVC
-1.808032627
FEV1FVCZ
1.3
FEV1_baseline
66.4594083
FEVpcpred
1.641250014
FVC
-1.814767166
FVCZ
76.79392862
FVCpcpred
13877
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:47Z
INSDC first public
2022-11-29T01:24:47Z
INSDC last update
public
INSDC status
30947
RawReads_ASVpipeline
SRS10620522
SRA accession
BSP0007
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
yes
acut_exac12m
Adherent
adherence
no
adm
8.18
ageyart
yes
all_3
no
antibiotic12m
1
any3_reasons
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
yes
attendschool
BSP0007
barcode
806rcbc322
barcode_806R
NCBI
broker name
1214
cd4
2016-08-10
collection_date
yes
cotrimoxazole
no
cough_enrl
2010-06-15T00:00:00
dateart
2009-01-01T00:00:00
datehiv
6.15
duryart
2018-01-08T00:00:00
endfollowup
['2017-07-12T00:00:00', '2017-07-12T00:00:00']
endtreatdate
2016-08
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-2.5276766
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
14.3
host_age
17.109442
host_body_mass_index
HIV-associated chronic lung disease
host_disease
66.4594083
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B1007
host_subject_id
human respiratory
host_tissue_sampled
CATATCGCAGTT
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-01-08T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R3
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
12:11:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
0.128798086
templateDNA_16SqPCR
20.39763088
templateDNA_16SqPCR_Cq
181583.763
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 0
visit
yes
visit012
yes
visit018
yes
visit1218
2016-08-03T00:00:00
visit_date
7
visittotno
2.6063814
vllog
404
vload
33.2
weight
B04
well
-1.1470844
zbmiuk
-3.3291056
zhauk
-2.9738715
zwauk
no
zymo_DNA