MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2004-04-16T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22108579
External Id
0.768332269
FEV1FVC
-1.827780687
FEV1FVCZ
0.74
FEV1_baseline
45.49079535
FEVpcpred
0.96312499
FVC
-3.871171613
FVCZ
52.69408123
FVCpcpred
14959
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:32Z
INSDC first public
2022-11-29T01:24:32Z
INSDC last update
public
INSDC status
40022
RawReads_ASVpipeline
SRS10484010
SRA accession
BSP0042
Submitter Id
yes
acut_exac12m
Adherent
adherence
no
adm
3.5
ageyart
yes
all_3
no
antibiotic12m
1
any3_reasons
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
yes
attendschool
BSP0042
barcode
806rcbc219
barcode_806R
NCBI
broker name
659
cd4
2017-01-03
collection_date
yes
cotrimoxazole
yes
cough_enrl
2007-10-15T00:00:00
dateart
2007-08-15T00:00:00
datehiv
9.22
duryart
2018-05-22T00:00:00
endfollowup
['2017-12-05T00:00:00', '2017-12-05T00:00:00']
endtreatdate
2017-01
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-4.0510802
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
12.7
host_age
12.664178
host_body_mass_index
HIV-associated chronic lung disease
host_disease
45.49079535
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1040
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
CGTAACCAACCA
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-05-22T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R1
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
12:00:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
0.130317042
templateDNA_16SqPCR
20.41902368
templateDNA_16SqPCR_Cq
183725.24
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 0
visit
yes
visit012
yes
visit018
yes
visit1218
2016-12-13T00:00:00
visit_date
7
visittotno
2.6138418
vllog
411
vload
22.2
weight
C03
well
-4.0768461
zbmiuk
-2.661248
zhauk
-4.3044758
zwauk
no
zymo_DNA