MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2001-03-23T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22108602
External Id
0.990531743
FEV1FVC
1.876022339
FEV1FVCZ
1.7
FEV1_baseline
57.82784817
FEVpcpred
1.716249943
FVC
-3.943133353
FVCZ
51.55823483
FVCpcpred
5685
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:31Z
INSDC first public
2022-11-29T01:24:31Z
INSDC last update
public
INSDC status
26030
RawReads_ASVpipeline
SRS10483987
SRA accession
BSP0142
Submitter Id
no
acut_exac12m
Adherent
adherence
no
adm
7.23
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0142
barcode
806rcbc165
barcode_806R
NCBI
broker name
909
cd4
2017-08-11
collection_date
no
cotrimoxazole
no
cough_enrl
2008-06-15T00:00:00
dateart
2008-06-15T00:00:00
datehiv
8.24
duryart
2018-01-30T00:00:00
endfollowup
['NA', '2017-08-11T00:00:00']
endtreatdate
2016-09
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-3.097558072
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
16.3
host_age
20.80703
host_body_mass_index
HIV-associated chronic lung disease
host_disease
57.82784817
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1011
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
TGGCATACGGCA
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-01-30T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R1
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
11:01:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.075659587
templateDNA_16SqPCR
21.32842545
templateDNA_16SqPCR_Cq
106667.37
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 48
visit
yes
visit012
yes
visit018
yes
visit1218
2017-08-11T00:00:00
visit_date
7
visittotno
1.5910646
vllog
39
vload
53
weight
F08
well
0.26014379
zbmiuk
-2.0137644
zhauk
-1.0596255
zwauk
no
zymo_DNA