H
BRrepeats
MIGS/MIMS/MIMARKS.host-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1999-09-10T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248930
External Id
0.784343491
FEV1FVC
-1.442094466
FEV1FVCZ
2.58
FEV1_baseline
86.19407807
FEVpcpred
3.289375067
FVC
-0.254940208
FVCZ
96.816678
FVCpcpred
13299
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:42Z
INSDC first public
2022-11-29T01:24:42Z
INSDC last update
public
INSDC status
25718
RawReads_ASVpipeline
SRS10550448
SRA accession
BSP0297
Submitter Id
Not abnormal
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
9.35
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
no
attendschool
BSP0297
barcode
806rcbc111
barcode_806R
NCBI
broker name
295
cd4
2018-02-08
collection_date
yes
cotrimoxazole
no
cough_enrl
2009-01-15T00:00:00
dateart
2008-10-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
9.07
duryart
2019-06-27T00:00:00
endfollowup
['2019-01-10T00:00:00', '2019-01-10T00:00:00']
endtreatdate
2018-02
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.0656735
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
18.4
host_age
20.66806
host_body_mass_index
HIV-associated chronic lung disease
host_disease
86.19407807
host_height
yes
host_hiv_stat
male
host_sex
B1176
host_subject_id
human respiratory
host_tissue_sampled
AGCTTGACAGCT
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-06-27T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:25:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
0.117453776
templateDNA_16SqPCR
20.31
templateDNA_16SqPCR_Cq
165590.1825
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 0
visit
yes
visit012
yes
visit018
yes
visit1218
2018-02-05T00:00:00
visit_date
7
visittotno
4.4563661
vllog
28600
vload
51.4
weight
H01
well
-0.24766695
zbmiuk
-2.7993107
zhauk
-2.2040219
zwauk
no
zymo_DNA