MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2007-05-03T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246614
External Id
0.770802956
FEV1FVC
-1.749918419
FEV1FVCZ
0.99
FEV1_baseline
70.5701833
FEVpcpred
1.284374952
FVC
-1.532104047
FVCZ
80.97154043
FVCpcpred
6052
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:35Z
INSDC first public
2022-11-29T01:24:35Z
INSDC last update
public
INSDC status
31284
RawReads_ASVpipeline
SRS10548238
SRA accession
BSP0268
Submitter Id
no
acut_exac12m
Adherent
adherence
no
adm
3.8
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
yes
attendschool
BSP0268
barcode
806rcbc168
barcode_806R
NCBI
broker name
326
cd4
2018-01-15
collection_date
yes
cotrimoxazole
no
cough_enrl
2011-02-20T00:00:00
dateart
2011-02-01T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
6.9
duryart
2019-06-03T00:00:00
endfollowup
['2018-12-17T00:00:00', '2018-12-17T00:00:00']
endtreatdate
2018-01
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-2.3253446
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
10.7
host_age
14.056265
host_body_mass_index
HIV-associated chronic lung disease
host_disease
70.5701833
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1157
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
CGACTGTCTTAA
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-06-03T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R1
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:20:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.563819204
templateDNA_16SqPCR
18.31452074
templateDNA_16SqPCR_Cq
794890.79
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 0
visit
yes
visit012
yes
visit018
yes
visit1218
2018-01-09T00:00:00
visit_date
7
visittotno
1.5910646
vllog
39
vload
22.6
weight
A09
well
-1.852546
zbmiuk
-2.3301845
zhauk
-2.9258451
zwauk
no
zymo_DNA