MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1998-07-09T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246682
External Id
0.884943642
FEV1FVC
0.342008791
FEV1FVCZ
3.24000001
FEV1_baseline
83.54155552
FEVpcpred
3.661250114
FVC
-1.53467527
FVCZ
80.88992837
FVCpcpred
8679
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:36Z
INSDC first public
2022-11-29T01:24:36Z
INSDC last update
public
INSDC status
39045
RawReads_ASVpipeline
SRS10548268
SRA accession
BSP0582
Submitter Id
AM
WRrepeats
AM
WRrepeats_WP
no
acut_exac12m
Adherent
adherence
no
adm
16.18
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
no
attendschool
BSP0582
barcode
806rcbc372
barcode_806R
NCBI
broker name
2019-01-08
collection_date
yes
cotrimoxazole
no
cough_enrl
2014-09-12T00:00:00
dateart
2014-08-19T00:00:00
datehiv
2.9
duryart
2019-01-08T00:00:00
endfollowup
['NA', '2018-07-09T00:00:00']
endtreatdate
2017-08
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.288345264
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
20.5
host_age
18.054956
host_body_mass_index
HIV-associated chronic lung disease
host_disease
83.54155552
host_height
yes
host_hiv_stat
male
host_sex
B1102
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
AGTGTTCGATCG
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-01-08T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R1
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:15:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
0.163116329
templateDNA_16SqPCR
20.13963231
templateDNA_16SqPCR_Cq
229966.75
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2019-01-08T00:00:00
visit_date
7
visittotno
0
vllog
0
vload
55.8
weight
D10
well
-2.0704193
zbmiuk
-0.23592852
zhauk
-1.8924545
zwauk
no
zymo_DNA