MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1998-07-10T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22108660
External Id
0.877935359
FEV1FVC
-0.240226234
FEV1FVCZ
2.359999895
FEV1_baseline
89.8638095
FEVpcpred
2.688124895
FVC
-0.682945499
FVCZ
90.90043919
FVCpcpred
12159
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:29Z
INSDC first public
2022-11-29T01:24:29Z
INSDC last update
public
INSDC status
37946
RawReads_ASVpipeline
SRS10483929
SRA accession
BSP0562
Submitter Id
no
acut_exac12m
Adherent
adherence
no
adm
14.17
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
yes
attendschool
BSP0562
barcode
806rcbc2
barcode_806R
NCBI
broker name
2018-11-15
collection_date
yes
cotrimoxazole
no
cough_enrl
2012-09-09T00:00:00
dateart
2012-05-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
4.8
duryart
2018-11-15T00:00:00
endfollowup
['NA', '2018-05-31T00:00:00']
endtreatdate
2017-06
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-0.777884866
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
20.3
host_age
23.534435
host_body_mass_index
HIV-associated chronic lung disease
host_disease
89.8638095
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B1090
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
AATCCGTACAGC
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-11-15T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R1
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
08:35:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
0.051010418
templateDNA_16SqPCR
21.85160018
templateDNA_16SqPCR_Cq
71916.16
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2018-11-15T00:00:00
visit_date
7
visittotno
57.2
weight
C12
well
0.57962203
zbmiuk
-1.283739
zhauk
-0.11574092
zwauk
no
zymo_DNA