MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2005-09-08T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246958
External Id
0.803797434
FEV1FVC
-1.347175984
FEV1FVCZ
1.27
FEV1_baseline
70.64548635
FEVpcpred
1.580000043
FVC
-1.747704117
FVCZ
78.43645747
FVCpcpred
11566
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:38Z
INSDC first public
2022-11-29T01:24:38Z
INSDC last update
public
INSDC status
47769
RawReads_ASVpipeline
SRS10548942
SRA accession
BYE12ZT3
Submitter Id
no
acut_exac12m
Adherent
adherence
no
adm
7.77
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BYE12ZT3
barcode
806rcbc134
barcode_806R
NCBI
broker name
2019-02-04
collection_date
yes
cotrimoxazole
no
cough_enrl
2013-06-15T00:00:00
dateart
2013-06-15T00:00:00
datehiv
4.26
duryart
2019-02-04T00:00:00
endfollowup
['NA', '2019-08-20T00:00:00']
endtreatdate
2017-09
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
3
f24mrcscore
-2.183741544
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
13.4
host_age
14.922145
host_body_mass_index
HIV-associated chronic lung disease
host_disease
70.64548635
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B3041
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
AATCTTGCTGCA
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-02-04T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R1
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
11:07:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
0.00917346
templateDNA_16SqPCR
24.49454943
templateDNA_16SqPCR_Cq
12933.05
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2019-02-04T00:00:00
visit_date
7
visittotno
27.6
weight
G04
well
-2.0931709
zbmiuk
-2.7008457
zhauk
-3.070452
zwauk
no
zymo_DNA