MIGS/MIMS/MIMARKS.host-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2006-12-30T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248983
External Id
0.956680957
FEV1FVC
1.307512732
FEV1FVCZ
1.960000038
FEV1_baseline
91.3325595
FEVpcpred
2.048749924
FVC
-1.182283049
FVCZ
84.98667649
FVCpcpred
18356
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:40Z
INSDC first public
2022-11-29T01:24:40Z
INSDC last update
public
INSDC status
33999
RawReads_ASVpipeline
SRS10550371
SRA accession
BSP0602
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
2.74
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0602
barcode
806rcbc268
barcode_806R
NCBI
broker name
2019-01-22
collection_date
yes
cotrimoxazole
no
cough_enrl
2009-09-24T00:00:00
dateart
2009-09-01T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
7.95
duryart
2019-01-22T00:00:00
endfollowup
['NA', '2018-08-07T00:00:00']
endtreatdate
2017-09
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-0.668191636
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
12
host_age
15.530958
host_body_mass_index
HIV-associated chronic lung disease
host_disease
91.3325595
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B1112
host_subject_id
human respiratory
host_tissue_sampled
ATGGATACGCTC
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-01-22T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
12:30:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.00097965
templateDNA_16SqPCR
27.23133228
templateDNA_16SqPCR_Cq
1381.142229
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2019-01-22T00:00:00
visit_date
7
visittotno
35.6
weight
D09
well
-1.3435019
zbmiuk
0.17906247
zhauk
-0.72171074
zwauk
no
zymo_DNA