MIGS/MIMS/MIMARKS.host-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2000-10-05T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249027
External Id
0.8736804
FEV1FVC
-0.432629077
FEV1FVCZ
1.5
FEV1_baseline
67.39227827
FEVpcpred
1.716874957
FVC
-2.444417506
FVCZ
69.77591412
FVCpcpred
17126
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:39Z
INSDC first public
2022-11-29T01:24:39Z
INSDC last update
public
INSDC status
35625
RawReads_ASVpipeline
SRS10550347
SRA accession
BYC109T3
Submitter Id
Abnormal HR
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
no
acut_exac12m
Not Adherent
adherence
no
adm
9.89
ageyart
no
all_3
yes
antibiotic12m
1
any3_reasons
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
yes
attendschool
BYC109T3
barcode
806rcbc251
barcode_806R
NCBI
broker name
255
cd4
2017-02-08
collection_date
yes
cotrimoxazole
no
cough_enrl
2010-08-26T00:00:00
dateart
2010-06-15T00:00:00
datehiv
6
duryart
2018-06-27T00:00:00
endfollowup
['2018-01-10T00:00:00', '2018-01-10T00:00:00']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-2.4112315
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
16.3
host_age
15.693376
host_body_mass_index
HIV-associated chronic lung disease
host_disease
67.39227827
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B3009
host_subject_id
human respiratory
host_tissue_sampled
CATCGGTCAAGG
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-06-27T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
no
one_visit
yes
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['0.1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:42:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.055510518
templateDNA_16SqPCR
21.29378712
templateDNA_16SqPCR_Cq
78260.5477
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 0
visit
no
visit012
yes
visit018
no
visit1218
2017-02-01T00:00:00
visit_date
7
visittotno
4.9934363
vllog
98500
vload
31.2
weight
C07
well
-2.6129014
zbmiuk
-4.4917302
zhauk
-5.0418811
zwauk
no
zymo_DNA