MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1999-06-05T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246589
External Id
0.919270317
FEV1FVC
0.313616617
FEV1FVCZ
2.74
FEV1_baseline
106.8781555
FEVpcpred
2.980624914
FVC
0.326671159
FVCZ
104.3706647
FVCpcpred
10674
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:33Z
INSDC first public
2022-11-29T01:24:33Z
INSDC last update
public
INSDC status
37473
RawReads_ASVpipeline
SRS10548180
SRA accession
BSP0097
Submitter Id
no
adm
11.49
ageyart
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
yes
attendschool
BSP0097
barcode
806rcbc299
barcode_806R
NCBI
broker name
56
cd4
2017-06-13
collection_date
yes
cotrimoxazole
2010-12-01T00:00:00
dateart
2004-10-05T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
6.53
duryart
['NA', 'not applicable']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
0.53628421
fev1z
Zimbabwe: Harare
geo_loc_name
comparison group
group
Homo sapiens
host
18
host_age
22.512978
host_body_mass_index
No HIV-associated chronic lung disease
host_disease
106.8781555
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
C125
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
TGCACAATGGCG
index_sequence
sputum
isolation_source
17.82 S 31.04 E
lat_lon
yes
one_visit
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R1
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
11:02:00
sp05time
no
tbtreat
0.5123
templateDNA_16SqPCR
18.53
templateDNA_16SqPCR_Cq
722257.33
templateDNA_16SqPCR_copies
human sputum metagenome
title
Week 0
visit
2017-06-13T00:00:00
visit_date
120000
vload
53.6
weight
C01
well
0.4600563
zbmiuk
-1.5341305
zhauk
-0.51282042
zwauk
no
zymo_DNA