MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2006-02-18T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246637
External Id
0.851905778
FEV1FVC
-0.435240623
FEV1FVCZ
1.83
FEV1_baseline
102.2847767
FEVpcpred
2.148124933
FVC
0.421257139
FVCZ
105.2328337
FVCpcpred
9613
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:34Z
INSDC first public
2022-11-29T01:24:34Z
INSDC last update
public
INSDC status
38524
RawReads_ASVpipeline
SRS10548195
SRA accession
BSP0377
Submitter Id
no
adm
8.29
ageyart
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0377
barcode
806rcbc177
barcode_806R
NCBI
broker name
993
cd4
2018-04-12
collection_date
yes
cotrimoxazole
2014-06-03T00:00:00
dateart
2010-03-29T00:00:00
datehiv
3.86
duryart
['NA', 'not applicable']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
0.17835903
fev1z
Zimbabwe: Harare
geo_loc_name
comparison group
group
Homo sapiens
host
12.1
host_age
15.734176
host_body_mass_index
No HIV-associated chronic lung disease
host_disease
102.2847767
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
C146
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
CTACCGGATCAA
index_sequence
sputum
isolation_source
17.82 S 31.04 E
lat_lon
yes
one_visit
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
R1
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
11:36:00
sp05time
no
tbtreat
0.032030716
templateDNA_16SqPCR
22.61824962
templateDNA_16SqPCR_Cq
45157.95
templateDNA_16SqPCR_copies
human sputum metagenome
title
Week 0
visit
2018-04-12T00:00:00
visit_date
484
vload
30.4
weight
B10
well
-1.028089
zbmiuk
-1.3981742
zhauk
-1.5073247
zwauk
no
zymo_DNA