MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2000-11-15T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22108631
External Id
0.623220933
FEV1FVC
-3.206260205
FEV1FVCZ
2.079999924
FEV1_baseline
63.25299916
FEVpcpred
3.337500095
FVC
-0.896535904
FVCZ
88.83786878
FVCpcpred
15101
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:32Z
INSDC first public
2022-11-29T01:24:32Z
INSDC last update
public
INSDC status
45215
RawReads_ASVpipeline
SRS10484009
SRA accession
BSP0387
Submitter Id
yes
acut_exac12m
Not Adherent
adherence
no
adm
8.2
ageyart
yes
all_3
no
antibiotic12m
1
any3_reasons
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
yes
attendschool
BSP0387
barcode
806rcbc236
barcode_806R
NCBI
broker name
2018-04-24
collection_date
yes
cotrimoxazole
yes
cough_enrl
2009-01-27T00:00:00
dateart
2008-12-12T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
7.85
duryart
2018-04-24T00:00:00
endfollowup
['NA', '2017-11-03T00:00:00']
endtreatdate
2016-12
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-2.749591284
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
17.4
host_age
18.043161
host_body_mass_index
HIV-associated chronic lung disease
host_disease
63.25299916
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1038
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
AGATAGGACAGG
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-04-24T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R1
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
08:50:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.209123322
templateDNA_16SqPCR
19.71220827
templateDNA_16SqPCR_Cq
294828.91
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2018-04-24T00:00:00
visit_date
7
visittotno
49.6
weight
D05
well
-1.3385847
zbmiuk
-1.5218813
zhauk
-2.1161437
zwauk
no
zymo_DNA