MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2005-09-14T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22108591
External Id
0.939852234
FEV1FVC
0.920586115
FEV1FVCZ
1.67
FEV1_baseline
84.47586057
FEVpcpred
1.776875019
FVC
-1.579463268
FVCZ
80.08638633
FVCpcpred
13469
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:28Z
INSDC first public
2022-11-29T01:24:28Z
INSDC last update
public
INSDC status
34647
RawReads_ASVpipeline
SRS10483901
SRA accession
BSP0087
Submitter Id
yes
acut_exac12m
Adherent
adherence
no
adm
yes
all_3
no
antibiotic12m
1
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0087
barcode
806rcbc303
barcode_806R
NCBI
broker name
1099
cd4
2017-05-26
collection_date
yes
cotrimoxazole
no
cough_enrl
2007-06-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
2018-10-16T00:00:00
endfollowup
['2018-04-24T00:00:00', '2018-04-24T00:00:00']
endtreatdate
2017-05
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
3
f24mrcscore
-1.1901523
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
11.6
host_age
16.214516
host_body_mass_index
HIV-associated chronic lung disease
host_disease
84.47586057
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B1076
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
GACGAGTCAGTC
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-10-16T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R1
run_processing_batch
stored in primestore
samp_mat_process
['1.5', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:00:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.02156
templateDNA_16SqPCR
23.21
templateDNA_16SqPCR_Cq
30395.99
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 0
visit
yes
visit012
yes
visit018
yes
visit1218
2017-05-18T00:00:00
visit_date
7
visittotno
3.2718415
vllog
1870
vload
34.8
weight
G01
well
-0.82659
zbmiuk
-0.20952852
zhauk
-0.59965086
zwauk
no
zymo_DNA