MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2005-01-25T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246964
External Id
0.895866054
FEV1FVC
-0.039538214
FEV1FVCZ
2.14
FEV1_baseline
101.6032173
FEVpcpred
2.388750076
FVC
0.117714164
FVCZ
101.5214022
FVCpcpred
14614
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:37Z
INSDC first public
2022-11-29T01:24:37Z
INSDC last update
public
INSDC status
45261
RawReads_ASVpipeline
SRS10548915
SRA accession
BYF100T3
Submitter Id
no
adm
2.22
ageyart
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BYF100T3
barcode
806rcbc313
barcode_806R
NCBI
broker name
1389
cd4
2017-06-28
collection_date
yes
cotrimoxazole
2007-04-17T00:00:00
dateart
2007-04-17T00:00:00
datehiv
10.2
duryart
['NA', 'not applicable']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
0.12457924
fev1z
Malawi: Blantyre
geo_loc_name
comparison group
group
Homo sapiens
host
12.4
host_age
19.368498
host_body_mass_index
No HIV-associated chronic lung disease
host_disease
101.6032173
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
C301
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
CGATAACATGCC
index_sequence
sputum
isolation_source
15.77 S 35.02 E
lat_lon
yes
one_visit
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
rs14antib
R1
run_processing_batch
stored in primestore
samp_mat_process
['10', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
11:55:00
sp05time
no
tbtreat
0.160039748
templateDNA_16SqPCR
20.16767545
templateDNA_16SqPCR_Cq
225629.28
templateDNA_16SqPCR_copies
human sputum metagenome
title
Week 0
visit
2017-06-28T00:00:00
visit_date
39
vload
43
weight
A03
well
0.38664582
zbmiuk
-0.44555041
zhauk
0.079170138
zwauk
no
zymo_DNA