MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2006-06-06T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246602
External Id
0.855106858
FEV1FVC
-0.348662054
FEV1FVCZ
1.8
FEV1_baseline
108.0442963
FEVpcpred
2.105000019
FVC
0.836703629
FVCZ
110.4333626
FVCpcpred
14343
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:33Z
INSDC first public
2022-11-29T01:24:33Z
INSDC last update
public
INSDC status
45651
RawReads_ASVpipeline
SRS10548175
SRA accession
BSP0160
Submitter Id
no
adm
1.32
ageyart
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0160
barcode
806rcbc74
barcode_806R
NCBI
broker name
668
cd4
2017-09-05
collection_date
yes
cotrimoxazole
2007-10-01T00:00:00
dateart
2007-06-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
9.93
duryart
['NA', 'not applicable']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
0.64262778
fev1z
Zimbabwe: Harare
geo_loc_name
comparison group
group
Homo sapiens
host
11.2
host_age
18.43622
host_body_mass_index
No HIV-associated chronic lung disease
host_disease
108.0442963
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
C106
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
CAAGCATGCCTA
index_sequence
sputum
isolation_source
17.82 S 31.04 E
lat_lon
yes
one_visit
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R1
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
11:15:00
sp05time
no
tbtreat
0.302169793
templateDNA_16SqPCR
19.32764701
templateDNA_16SqPCR_Cq
426008.88
templateDNA_16SqPCR_copies
human sputum metagenome
title
Week 0
visit
2017-09-05T00:00:00
visit_date
39
vload
34.2
weight
C09
well
0.65699458
zbmiuk
-1.2323589
zhauk
-0.20430756
zwauk
no
zymo_DNA