X
BRrepeats
MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2001-02-22T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249133
External Id
0.996553437
FEV1FVC
2.035027471
FEV1FVCZ
2.53
FEV1_baseline
84.53301963
FEVpcpred
2.538749933
FVC
-1.88103875
FVCZ
75.62879925
FVCpcpred
13815
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:43Z
INSDC first public
2022-11-29T01:24:43Z
INSDC last update
public
INSDC status
29158
RawReads_ASVpipeline
SRS10550487
SRA accession
BYC124T3
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Not Adherent
adherence
no
adm
4.31
ageyart
no
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BYC124T3
barcode
806rcbc13
barcode_806R
NCBI
broker name
564
cd4
2018-02-05
collection_date
yes
cotrimoxazole
no
cough_enrl
2005-06-15T00:00:00
dateart
2002-03-10T00:00:00
datehiv
12.64
duryart
2019-06-17T00:00:00
endfollowup
['2019-01-07T00:00:00', '2019-01-07T00:00:00']
endtreatdate
2018-02
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-1.1853482
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
16.9
host_age
15.633404
host_body_mass_index
HIV-associated chronic lung disease
host_disease
84.53301963
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B3069
host_subject_id
human respiratory
host_tissue_sampled
CCTCGTTCGACT
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-06-17T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
no
one_visit
yes
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:52:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.006531108
templateDNA_16SqPCR
24.48
templateDNA_16SqPCR_Cq
9207.7706
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 0
visit
yes
visit012
no
visit018
no
visit1218
2018-01-27T00:00:00
visit_date
7
visittotno
0
vllog
0
vload
43.6
weight
F01
well
-2.7025442
zbmiuk
0.57733482
zhauk
-1.9912035
zwauk
no
zymo_DNA