MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2001-05-07T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22250774
External Id
0.87867178
FEV1FVC
-0.066798363
FEV1FVCZ
2.150000095
FEV1_baseline
70.40289436
FEVpcpred
2.446875095
FVC
-2.377533198
FVCZ
70.58074413
FVCpcpred
15048
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:47Z
INSDC first public
2022-11-29T01:24:47Z
INSDC last update
public
INSDC status
30254
RawReads_ASVpipeline
SRS10620540
SRA accession
BSP0298
Submitter Id
Not abnormal
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
yes
acut_exac12m
Adherent
adherence
no
adm
7.73
ageyart
yes
all_3
no
antibiotic12m
1
any3_reasons
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
yes
attendschool
BSP0298
barcode
806rcbc365
barcode_806R
NCBI
broker name
2018-02-08
collection_date
yes
cotrimoxazole
no
cough_enrl
2009-01-27T00:00:00
dateart
2001-07-15T00:00:00
datehiv
7.65
duryart
2018-02-08T00:00:00
endfollowup
['NA', '2017-08-23T00:00:00']
endtreatdate
2016-09
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-2.206437462
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
16.7
host_age
17.078596
host_body_mass_index
HIV-associated chronic lung disease
host_disease
70.40289436
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1015
host_subject_id
human respiratory
host_tissue_sampled
CCTATCCTTGGC
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-02-08T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R3
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
08:46:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.067094816
templateDNA_16SqPCR
21.35369075
templateDNA_16SqPCR_Cq
94592.47074
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2018-02-08T00:00:00
visit_date
7
visittotno
44.6
weight
E09
well
-1.740948
zbmiuk
-1.9010879
zhauk
-2.5586498
zwauk
no
zymo_DNA