MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1998-10-30T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246627
External Id
0.787100276
FEV1FVC
-1.648399097
FEV1FVCZ
1.8
FEV1_baseline
74.01101007
FEVpcpred
2.28687501
FVC
-1.191821712
FVCZ
84.26823902
FVCpcpred
18628
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:36Z
INSDC first public
2022-11-29T01:24:36Z
INSDC last update
public
INSDC status
44654
RawReads_ASVpipeline
SRS10548273
SRA accession
BSP0349
Submitter Id
no
acut_exac12m
Not Adherent
adherence
no
adm
12.47
ageyart
no
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
no
attendschool
BSP0349
barcode
806rcbc269
barcode_806R
NCBI
broker name
241
cd4
2018-03-16
collection_date
yes
cotrimoxazole
no
cough_enrl
2011-04-20T00:00:00
dateart
2011-04-03T00:00:00
datehiv
43230
dow
COTRIMOXAZOLE
drug_usage
6.9
duryart
2018-05-10T00:00:00
endfollowup
['2018-04-06T00:00:00', '2018-04-06T00:00:00']
endtreatdate
2018-03
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.9695979
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
19.3
host_age
23.43541
host_body_mass_index
HIV-associated chronic lung disease
host_disease
74.01101007
host_height
yes
host_hiv_stat
female
host_sex
B1191
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
CCATTCGCCCAT
index_sequence
sputum
isolation_source
2 wks
lastvisit
2018-03-29T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
yes
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R1
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
08:31:00
sp05time
withdrawal
study_complt_stat
no
tbtreat
0.012180096
templateDNA_16SqPCR
23.96116752
templateDNA_16SqPCR_Cq
17171.9
templateDNA_16SqPCR_copies
human sputum metagenome
title
By Physician
treatstopreason
Azithromycin
trial_arm
Week 0
visit
no
visit012
no
visit018
no
visit1218
2018-03-12T00:00:00
visit_date
1
visittotno
4.3838153
vllog
24200
vload
52.8
weight
E09
well
0.62569344
zbmiuk
-2.2401826
zhauk
-0.68499243
zwauk
no
zymo_DNA