Q
BRrepeats
MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2009-11-24T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22108652
External Id
0.80044468
FEV1FVC
-1.701977901
FEV1FVCZ
0.899999976
FEV1_baseline
78.37349963
FEVpcpred
1.124374986
FVC
-0.854730889
FVCZ
89.0103121
FVCpcpred
10700
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:29Z
INSDC first public
2022-11-29T01:24:29Z
INSDC last update
public
INSDC status
49684
RawReads_ASVpipeline
SRS10483907
SRA accession
BSP0543
Submitter Id
no
acut_exac12m
Adherent
adherence
no
adm
4.6
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
yes
attendschool
BSP0543
barcode
806rcbc316
barcode_806R
NCBI
broker name
2018-10-15
collection_date
yes
cotrimoxazole
no
cough_enrl
2014-06-30T00:00:00
dateart
2014-06-14T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
2.91
duryart
2018-10-15T00:00:00
endfollowup
['NA', '2018-04-30T00:00:00']
endtreatdate
2017-05
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.632954259
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
8.8
host_age
13.134665
host_body_mass_index
HIV-associated chronic lung disease
host_disease
78.37349963
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B1077
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
TGATCAGAAGAG
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-10-15T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R1
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:18:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
0.676157177
templateDNA_16SqPCR
18.04544573
templateDNA_16SqPCR_Cq
953268.55
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2018-10-15T00:00:00
visit_date
7
visittotno
3.9304397
vllog
8520
vload
18.6
weight
D03
well
-2.1063316
zbmiuk
-2.2817426
zhauk
-2.9724417
zwauk
no
zymo_DNA