MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2007-08-07T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246963
External Id
0.903732764
FEV1FVC
0.267284582
FEV1FVCZ
1.15
FEV1_baseline
82.50645621
FEVpcpred
1.272500038
FVC
-1.515679805
FVCZ
81.2723853
FVCpcpred
14418
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:36Z
INSDC first public
2022-11-29T01:24:36Z
INSDC last update
public
INSDC status
45860
RawReads_ASVpipeline
SRS10548876
SRA accession
BYE13BT3
Submitter Id
no
acut_exac12m
Adherent
adherence
no
adm
9.26
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BYE13BT3
barcode
806rcbc249
barcode_806R
NCBI
broker name
2019-03-06
collection_date
yes
cotrimoxazole
no
cough_enrl
2016-11-10T00:00:00
dateart
2016-11-10T00:00:00
datehiv
0.93
duryart
2019-03-06T00:00:00
endfollowup
['NA', '2018-09-19T00:00:00']
endtreatdate
2017-10
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
3
f24mrcscore
-1.37098869
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
11.5
host_age
15.310966
host_body_mass_index
HIV-associated chronic lung disease
host_disease
82.50645621
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B3054
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
ACACAAAGGGAG
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-03-06T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R1
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
11:30:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.000386794
templateDNA_16SqPCR
29.11659098
templateDNA_16SqPCR_Cq
545.31
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2019-03-06T00:00:00
visit_date
7
visittotno
24
weight
A07
well
-1.1340629
zbmiuk
-3.0136588
zhauk
-2.9476986
zwauk
no
zymo_DNA