MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2002-08-17T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22108587
External Id
0.867075678
FEV1FVC
-0.442377326
FEV1FVCZ
1.59
FEV1_baseline
76.8082612
FEVpcpred
1.83375001
FVC
-1.656925403
FVCZ
79.50504097
FVCpcpred
13552
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:28Z
INSDC first public
2022-11-29T01:24:28Z
INSDC last update
public
INSDC status
35647
RawReads_ASVpipeline
SRS10483890
SRA accession
BSP0069
Submitter Id
no
acut_exac12m
Adherent
adherence
no
adm
12.16
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0069
barcode
806rcbc13
barcode_806R
NCBI
broker name
668
cd4
2017-04-05
collection_date
yes
cotrimoxazole
no
cough_enrl
2014-10-14T00:00:00
dateart
2011-06-15T00:00:00
datehiv
2.48
duryart
2018-08-22T00:00:00
endfollowup
['2018-03-07T00:00:00', '2018-03-07T00:00:00']
endtreatdate
2017-04
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-1.7093667
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
14.6
host_age
16.498163
host_body_mass_index
HIV-associated chronic lung disease
host_disease
76.8082612
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1062
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
CCTCGTTCGACT
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-08-22T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R1
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
11:16:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
0.269
templateDNA_16SqPCR
19.48
templateDNA_16SqPCR_Cq
379245.02
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 0
visit
yes
visit012
yes
visit018
yes
visit1218
2017-04-03T00:00:00
visit_date
7
visittotno
3.0530784
vllog
1130
vload
32.8
weight
F01
well
-1.4048965
zbmiuk
-3.1176
zhauk
-2.8313529
zwauk
no
zymo_DNA