MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2009-08-15T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249139
External Id
0.870864455
FEV1FVC
-0.490899431
FEV1FVCZ
1.02
FEV1_baseline
89.31132089
FEVpcpred
1.171249986
FVC
-0.602862907
FVCZ
92.22039095
FVCpcpred
17005
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:44Z
INSDC first public
2022-11-29T01:24:44Z
INSDC last update
public
INSDC status
35106
RawReads_ASVpipeline
SRS10550502
SRA accession
BYC137T3
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
all_3
no
antibiotic12m
0
any3_reasons
BYC137T3
barcode
806rcbc291
barcode_806R
NCBI
broker name
542
cd4
2018-04-12
collection_date
['2019-03-14T00:00:00', 'missing']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
3
f24mrcscore
-0.8144486
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
8.6
host_age
13.696129
host_body_mass_index
HIV-associated chronic lung disease
host_disease
89.31132089
host_height
yes
host_hiv_stat
B3092
host_subject_id
human respiratory
host_tissue_sampled
CGCATGAGGATC
index_sequence
sputum
isolation_source
15.77 S 35.02 E
lat_lon
no
one_visit
yes
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
08:20:00
sp05time
0.061212647
templateDNA_16SqPCR
21.14964102
templateDNA_16SqPCR_Cq
86299.59649
templateDNA_16SqPCR_copies
human sputum metagenome
title
Azithromycin
trial_arm
Week 0
visit
yes
visit012
no
visit018
no
visit1218
2018-03-31T00:00:00
visit_date
4.9731278
vllog
94000
vload
19.2
weight
C12
well
-1.708041
zbmiuk
-2.3022738
zhauk
-2.859627
zwauk
no
zymo_DNA