MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2003-07-24T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248082
External Id
0.769403812
FEV1FVC
-1.966547602
FEV1FVCZ
1.710000038
FEV1_baseline
70.02657098
FEVpcpred
2.222500086
FVC
-1.399702888
FVCZ
82.01795974
FVCpcpred
12372
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:51Z
INSDC first public
2022-11-29T01:24:51Z
INSDC last update
public
INSDC status
25892
RawReads_ASVpipeline
SRS10620700
SRA accession
BSP0210
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
3.29
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0210
barcode
806rcbc192
barcode_806R
NCBI
broker name
1483
cd4
2017-10-06
collection_date
no
cotrimoxazole
no
cough_enrl
2006-11-08T00:00:00
dateart
2005-07-04T00:00:00
datehiv
9.99
duryart
2018-03-15T00:00:00
endfollowup
['NA', '2017-10-06T00:00:00']
endtreatdate
2016-11
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-2.266689494
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
14.2
host_age
19.671576
host_body_mass_index
HIV-associated chronic lung disease
host_disease
70.02657098
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B1034
host_subject_id
human respiratory
host_tissue_sampled
CGCAAATTCGAC
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-03-15T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
12:01:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
0.08838196
templateDNA_16SqPCR
20.72557291
templateDNA_16SqPCR_Cq
124603.7842
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 48
visit
yes
visit012
yes
visit018
yes
visit1218
2017-10-06T00:00:00
visit_date
7
visittotno
2.4871383
vllog
307
vload
47.2
weight
A12
well
0.061829597
zbmiuk
-0.83146751
zhauk
-0.47528851
zwauk
no
zymo_DNA