MIGS/MIMS/MIMARKS.host-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1999-05-05T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249014
External Id
0.821312534
FEV1FVC
-0.858792637
FEV1FVCZ
2.37
FEV1_baseline
76.48874564
FEVpcpred
2.885624886
FVC
-1.49001775
FVCZ
81.44967539
FVCpcpred
10238
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:42Z
INSDC first public
2022-11-29T01:24:42Z
INSDC last update
public
INSDC status
30652
RawReads_ASVpipeline
SRS10550438
SRA accession
BSP0697
Submitter Id
AU
WRrepeats
AU
WRrepeats_WP
Abnormal HR
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
10.2
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0697
barcode
806rcbc176
barcode_806R
NCBI
broker name
2019-06-19
collection_date
yes
cotrimoxazole
no
cough_enrl
2009-07-18T00:00:00
dateart
2009-06-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
8.54
duryart
2019-06-19T00:00:00
endfollowup
['NA', '2019-01-09T00:00:00']
endtreatdate
2018-01
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.827900584
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
20.1
host_age
18.274593
host_body_mass_index
HIV-associated chronic lung disease
host_disease
76.48874564
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1167
host_subject_id
human respiratory
host_tissue_sampled
TGGCACCGATTA
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-06-19T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:20:00
sp05time
study ended
study_complt_stat
yes
tbtreat
0.167108566
templateDNA_16SqPCR
19.79766233
templateDNA_16SqPCR_Cq
235595.1341
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2019-06-19T00:00:00
visit_date
7
visittotno
46.2
weight
A10
well
-1.8526634
zbmiuk
-2.6373684
zhauk
-3.6555648
zwauk
no
zymo_DNA