MIGS/MIMS/MIMARKS.host-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2004-04-16T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248970
External Id
0.878649816
FEV1FVC
-0.46750747
FEV1FVCZ
2.049999952
FEV1_baseline
84.61029941
FEVpcpred
2.333125114
FVC
-1.002081143
FVCZ
87.02393242
FVCpcpred
12402
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:41Z
INSDC first public
2022-11-29T01:24:41Z
INSDC last update
public
INSDC status
26749
RawReads_ASVpipeline
SRS10550423
SRA accession
BSP0573
Submitter Id
AK
WRrepeats
AK
WRrepeats_WP
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
3.16
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0573
barcode
806rcbc239
barcode_806R
NCBI
broker name
2018-12-14
collection_date
yes
cotrimoxazole
no
cough_enrl
2007-06-15T00:00:00
dateart
2007-03-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
10.12
duryart
2018-12-14T00:00:00
endfollowup
['NA', '2018-06-29T00:00:00']
endtreatdate
2017-07
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.179356472
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
14.6
host_age
19.208246
host_body_mass_index
HIV-associated chronic lung disease
host_disease
84.61029941
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B1098
host_subject_id
human respiratory
host_tissue_sampled
GTAAGTCGTGGC
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-12-14T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:10:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.394811683
templateDNA_16SqPCR
18.40855267
templateDNA_16SqPCR_Cq
556618.4508
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2018-12-14T00:00:00
visit_date
7
visittotno
45.2
weight
G05
well
-0.22962314
zbmiuk
-1.2832319
zhauk
-0.99245363
zwauk
no
zymo_DNA