MIGS/MIMS/MIMARKS.host-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2006-01-06T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249015
External Id
0.93961948
FEV1FVC
0.792970513
FEV1FVCZ
1.419999957
FEV1_baseline
58.25775179
FEVpcpred
1.511250019
FVC
-3.58365037
FVCZ
55.56357261
FVCpcpred
20416
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:39Z
INSDC first public
2022-11-29T01:24:39Z
INSDC last update
public
INSDC status
34360
RawReads_ASVpipeline
SRS10550333
SRA accession
BSP0700
Submitter Id
Abnormal HR
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
yes
acut_exac12m
Adherent
adherence
no
adm
10.56
ageyart
no
all_3
no
antibiotic12m
1
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0700
barcode
806rcbc78
barcode_806R
NCBI
broker name
993
cd4
2019-06-20
collection_date
yes
cotrimoxazole
no
cough_enrl
2016-07-28T00:00:00
dateart
2016-07-22T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
1.97
duryart
2019-06-20T00:00:00
endfollowup
['NA', '2019-06-20T00:00:00']
endtreatdate
2018-07
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-3.119310532
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
13.4
host_age
14.353544
host_body_mass_index
HIV-associated chronic lung disease
host_disease
58.25775179
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B1225
host_subject_id
human respiratory
host_tissue_sampled
GTCATATCGTAC
index_sequence
sputum
isolation_source
12 mths
lastvisit
2019-06-20T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
yes
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:15:00
sp05time
study ended
study_complt_stat
no
tbtreat
0.970976992
templateDNA_16SqPCR
17.11104394
templateDNA_16SqPCR_Cq
1368915.187
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 48
visit
yes
visit012
no
visit018
no
visit1218
2019-06-20T00:00:00
visit_date
5
visittotno
1.5910646
vllog
39
vload
35.2
weight
G09
well
-2.6453006
zbmiuk
-0.12316795
zhauk
-1.863654
zwauk
no
zymo_DNA