C
BRrepeats
MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2002-02-18T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22108583
External Id
0.84773886
FEV1FVC
-0.532010222
FEV1FVCZ
1.98
FEV1_baseline
73.63990248
FEVpcpred
2.335624933
FVC
-1.901549192
FVCZ
76.4876472
FVCpcpred
19214
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:32Z
INSDC first public
2022-11-29T01:24:32Z
INSDC last update
public
INSDC status
53992
RawReads_ASVpipeline
SRS10484024
SRA accession
BSP0052
Submitter Id
no
acut_exac12m
Not Adherent
adherence
no
adm
10.49
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0052
barcode
806rcbc139
barcode_806R
NCBI
broker name
824
cd4
2017-01-30
collection_date
yes
cotrimoxazole
no
cough_enrl
2012-08-15T00:00:00
dateart
2003-04-15T00:00:00
datehiv
4.46
duryart
2018-06-18T00:00:00
endfollowup
['2017-03-20T00:00:00', '2017-03-20T00:00:00']
endtreatdate
2017-01
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.9380056
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
14.9
host_age
16.468374
host_body_mass_index
HIV-associated chronic lung disease
host_disease
73.63990248
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1049
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
TAGCGGATCACG
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-06-18T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R1
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:28:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
0.001927897
templateDNA_16SqPCR
26.83528544
templateDNA_16SqPCR_Cq
2718.01
templateDNA_16SqPCR_copies
human sputum metagenome
title
By Physician
treatstopreason
Azithromycin
trial_arm
Week 0
visit
yes
visit012
yes
visit018
yes
visit1218
2017-01-25T00:00:00
visit_date
7
visittotno
3.6232493
vllog
4200
vload
40.8
weight
D05
well
-1.5373679
zbmiuk
-1.3803678
zhauk
-1.7370037
zwauk
no
zymo_DNA