Z
BRrepeats
MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1999-12-22T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22108709
External Id
10650
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:30Z
INSDC first public
2022-11-29T01:24:30Z
INSDC last update
public
INSDC status
24262
RawReads_ASVpipeline
SRS10483967
SRA accession
WRrepeat_BYD13ZT3
Submitter Id
AAO
WRrepeats
AAO
WRrepeats_WP
Adherent
adherence
no
adm
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BYD13ZT3
barcode
806rcbc52
barcode_806R
NCBI
broker name
2019-01-03
collection_date
yes
cotrimoxazole
no
cough_enrl
2019-03-28T00:00:00
endfollowup
['not applicable', '2019-01-03T00:00:00']
endtreatdate
2018-01
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
Malawi: Blantyre
geo_loc_name
trial
group
Homo sapiens
host
19
host_age
HIV-associated chronic lung disease
host_disease
yes
host_hiv_stat
student
host_occupation
female
host_sex
B3065
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
ATTCCTGTGAGT
index_sequence
sputum
isolation_source
15 mths
lastvisit
2019-03-28T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
rs14antib
R1
run_processing_batch
stored in primestore
samp_mat_process
['not applicable', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
sequencing_control
sample_type
expectorated
sampling_induced_expectorated
WRrepeat
sequencing_control_details
yes
sequencing_controls
no
smoker
study ended
study_complt_stat
no
tbtreat
0.281971347
templateDNA_16SqPCR
19.42801262
templateDNA_16SqPCR_Cq
397532.45
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 48
visit
6
visittotno
E06
well
no
zymo_DNA