MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2000-05-12T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248095
External Id
0.984327528
FEV1FVC
1.842602374
FEV1FVCZ
2.630000114
FEV1_baseline
79.34359735
FEVpcpred
2.671875
FVC
-2.383774892
FVCZ
70.4778204
FVCpcpred
19259
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:49Z
INSDC first public
2022-11-29T01:24:49Z
INSDC last update
public
INSDC status
42358
RawReads_ASVpipeline
SRS10620648
SRA accession
BSP0307
Submitter Id
Not abnormal
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
15.09
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0307
barcode
806rcbc68
barcode_806R
NCBI
broker name
2018-02-15
collection_date
yes
cotrimoxazole
no
cough_enrl
2015-06-15T00:00:00
dateart
2005-04-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
1.29
duryart
2018-02-15T00:00:00
endfollowup
['NA', '2017-08-31T00:00:00']
endtreatdate
2016-09
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.572920342
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
17.7
host_age
17.149412
host_body_mass_index
HIV-associated chronic lung disease
host_disease
79.34359735
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1016
host_subject_id
human respiratory
host_tissue_sampled
ATCGATCTGTGG
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-02-15T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
08:32:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.032533792
templateDNA_16SqPCR
22.07628502
templateDNA_16SqPCR_Cq
45867.20596
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2018-02-15T00:00:00
visit_date
7
visittotno
3.5899496
vllog
3890
vload
47.2
weight
E08
well
-1.9933448
zbmiuk
-1.567481
zhauk
-2.6942406
zwauk
no
zymo_DNA