MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2002-12-10T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22250767
External Id
0.880258935
FEV1FVC
-0.057720004
FEV1FVCZ
1.700000048
FEV1_baseline
65.38552028
FEVpcpred
1.931249976
FVC
-2.786213106
FVCZ
65.66436145
FVCpcpred
12464
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:47Z
INSDC first public
2022-11-29T01:24:46Z
INSDC last update
public
INSDC status
22095
RawReads_ASVpipeline
SRS10620520
SRA accession
BSP0256
Submitter Id
Abnormal HR
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
12.21
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0256
barcode
806rcbc220
barcode_806R
NCBI
broker name
2017-12-19
collection_date
yes
cotrimoxazole
no
cough_enrl
2015-02-24T00:00:00
dateart
2015-02-10T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
1.44
duryart
2017-12-19T00:00:00
endfollowup
['NA', '2017-07-04T00:00:00']
endtreatdate
2016-08
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-2.529707203
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
15
host_age
15.587224
host_body_mass_index
HIV-associated chronic lung disease
host_disease
65.38552028
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1005
host_subject_id
human respiratory
host_tissue_sampled
CATTTGGACGAC
index_sequence
sputum
isolation_source
18 mths
lastvisit
2017-12-19T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R3
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
08:20:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.0186959
templateDNA_16SqPCR
23.22721829
templateDNA_16SqPCR_Cq
26358.09262
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2017-12-19T00:00:00
visit_date
7
visittotno
1.5910646
vllog
39
vload
37.4
weight
D03
well
-2.2035027
zbmiuk
-1.7473122
zhauk
-2.3283625
zwauk
no
zymo_DNA