MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2004-12-13T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249178
External Id
0.706382993
FEV1FVC
-2.583174412
FEV1FVCZ
1.66
FEV1_baseline
84.01640296
FEVpcpred
2.349999905
FVC
0.523327022
FVCZ
106.5155452
FVCpcpred
15545
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:43Z
INSDC first public
2022-11-29T01:24:43Z
INSDC last update
public
INSDC status
32363
RawReads_ASVpipeline
SRS10550468
SRA accession
BYE134T3
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Not Adherent
adherence
yes
all_3
no
antibiotic12m
0
any3_reasons
BYE134T3
barcode
806rcbc211
barcode_806R
NCBI
broker name
2019-02-14
collection_date
['NA', 'missing']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-1.186674814
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
14.1
host_age
17.163191
host_body_mass_index
HIV-associated chronic lung disease
host_disease
84.01640296
host_height
yes
host_hiv_stat
B3048
host_subject_id
human respiratory
host_tissue_sampled
TTATCACGTGCA
index_sequence
sputum
isolation_source
15.77 S 35.02 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
08:50:00
sp05time
0.007657053
templateDNA_16SqPCR
24.26
templateDNA_16SqPCR_Cq
10795.16403
templateDNA_16SqPCR_copies
human sputum metagenome
title
Azithromycin
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2019-02-14T00:00:00
visit_date
33.4
weight
C02
well
-0.83327883
zbmiuk
-2.8995526
zhauk
-2.3705838
zwauk
no
zymo_DNA