MIGS/MIMS/MIMARKS.host-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2000-04-18T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249007
External Id
0.800000019
FEV1FVC
-1.420771727
FEV1FVCZ
2.03
FEV1_baseline
72.18103146
FEVpcpred
2.537499905
FVC
-1.511893669
FVCZ
80.13975991
FVCpcpred
18258
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:39Z
INSDC first public
2022-11-29T01:24:39Z
INSDC last update
public
INSDC status
41146
RawReads_ASVpipeline
SRS10550329
SRA accession
BSP0687
Submitter Id
Abnormal HR
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
yes
acut_exac12m
Not Adherent
adherence
no
adm
13.99
ageyart
no
all_3
no
antibiotic12m
1
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
no
attendschool
BSP0687
barcode
806rcbc198
barcode_806R
NCBI
broker name
17
cd4
2019-06-10
collection_date
yes
cotrimoxazole
yes
cough_enrl
2014-04-15T00:00:00
dateart
2014-04-01T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
4.22
duryart
2019-06-10T00:00:00
endfollowup
['NA', '2019-06-10T00:00:00']
endtreatdate
2018-07
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-2.105169888
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
19.1
host_age
21.874157
host_body_mass_index
HIV-associated chronic lung disease
host_disease
72.18103146
host_height
yes
host_hiv_stat
female
host_sex
B1218
host_subject_id
human respiratory
host_tissue_sampled
GGTAACAGCTCG
index_sequence
sputum
isolation_source
12 mths
lastvisit
2019-06-10T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
yes
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:05:00
sp05time
study ended
study_complt_stat
no
tbtreat
0.2378891
templateDNA_16SqPCR
19.28323063
templateDNA_16SqPCR_Cq
335383.8498
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 48
visit
yes
visit012
no
visit018
no
visit1218
2019-06-10T00:00:00
visit_date
5
visittotno
5.0569048
vllog
114000
vload
56.7
weight
G12
well
0.12842031
zbmiuk
-0.43546128
zhauk
-0.15617456
zwauk
no
zymo_DNA