MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2010-06-03T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22250765
External Id
0.90205015
FEV1FVC
0.004709322
FEV1FVCZ
0.99000001
FEV1_baseline
85.79089126
FEVpcpred
1.097499967
FVC
-1.094834802
FVCZ
85.44254136
FVCpcpred
17585
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:46Z
INSDC first public
2022-11-29T01:24:46Z
INSDC last update
public
INSDC status
30155
RawReads_ASVpipeline
SRS10620512
SRA accession
BSP0236
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
2.2
ageyart
no
all_3
yes
antibiotic12m
1
any3_reasons
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
yes
attendschool
BSP0236
barcode
806rcbc137
barcode_806R
NCBI
broker name
2017-11-10
collection_date
yes
cotrimoxazole
no
cough_enrl
2012-08-15T00:00:00
dateart
2012-08-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
3.86
duryart
2017-11-10T00:00:00
endfollowup
['NA', '2017-05-26T00:00:00']
endtreatdate
2016-06
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.030632716
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
7.4
host_age
13.958593
host_body_mass_index
HIV-associated chronic lung disease
host_disease
85.79089126
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1002
host_subject_id
human respiratory
host_tissue_sampled
GACACATTTCTG
index_sequence
sputum
isolation_source
18 mths
lastvisit
2017-11-10T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
yes
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R3
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
08:15:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.044762745
templateDNA_16SqPCR
21.98209845
templateDNA_16SqPCR_Cq
63107.98518
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 72
visit
no
visit012
no
visit018
yes
visit1218
2017-11-10T00:00:00
visit_date
7
visittotno
19.8
weight
B05
well
-1.3422443
zbmiuk
-1.0248015
zhauk
-1.5671793
zwauk
no
zymo_DNA