MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2004-03-30T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22250735
External Id
0.923341997
FEV1FVC
0.681697628
FEV1FVCZ
1.34
FEV1_baseline
76.13845686
FEVpcpred
1.451249957
FVC
-2.190397502
FVCZ
73.03873818
FVCpcpred
18916
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:45Z
INSDC first public
2022-11-29T01:24:45Z
INSDC last update
public
INSDC status
32539
RawReads_ASVpipeline
SRS10620450
SRA accession
BSP0047
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Not Adherent
adherence
no
adm
11.24
ageyart
no
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0047
barcode
806rcbc227
barcode_806R
NCBI
broker name
677
cd4
2017-01-24
collection_date
yes
cotrimoxazole
no
cough_enrl
2015-06-25T00:00:00
dateart
2015-06-10T00:00:00
datehiv
43193
dow
1.59
duryart
2018-04-03T00:00:00
endfollowup
['2018-01-02T00:00:00', '2018-01-02T00:00:00']
endtreatdate
2017-01
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-1.8054247
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
12.8
host_age
15.694739
host_body_mass_index
HIV-associated chronic lung disease
host_disease
76.13845686
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1046
host_subject_id
human respiratory
host_tissue_sampled
AACCATCGGGTG
index_sequence
sputum
isolation_source
unscheduled
lastvisit
2018-04-03T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
yes
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R3
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:55:00
sp05time
withdrawal
study_complt_stat
no
tbtreat
0.131671726
templateDNA_16SqPCR
20.35231695
templateDNA_16SqPCR_Cq
185635.115
templateDNA_16SqPCR_copies
human sputum metagenome
title
Moved away
treatstopreason
Placebo
trial_arm
Week 0
visit
yes
visit012
no
visit018
no
visit1218
2017-01-17T00:00:00
visit_date
5
visittotno
1.9493901
vllog
89
vload
29.2
weight
C04
well
-1.2895427
zbmiuk
-2.212496
zhauk
-2.2639992
zwauk
no
zymo_DNA