MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2002-05-03T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249150
External Id
0.826322364
FEV1FVC
-1.333186072
FEV1FVCZ
1.24
FEV1_baseline
58.92248373
FEVpcpred
1.500625014
FVC
-2.726105703
FVCZ
65.08742257
FVCpcpred
18979
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:44Z
INSDC first public
2022-11-29T01:24:44Z
INSDC last update
public
INSDC status
46012
RawReads_ASVpipeline
SRS10550505
SRA accession
BYD13ET3
Submitter Id
Abnormal HR
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
7.37
ageyart
no
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BYD13ET3
barcode
806rcbc42
barcode_806R
NCBI
broker name
11
cd4
2019-04-24
collection_date
yes
cotrimoxazole
no
cough_enrl
2009-09-15T00:00:00
dateart
2009-09-15T00:00:00
datehiv
8.68
duryart
2019-04-24T00:00:00
endfollowup
['NA', '2019-04-24T00:00:00']
endtreatdate
2018-05
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-3.072361608
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
16.9
host_age
14.68739
host_body_mass_index
HIV-associated chronic lung disease
host_disease
58.92248373
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B3097
host_subject_id
human respiratory
host_tissue_sampled
ACGTGTACCCAA
index_sequence
sputum
isolation_source
12 mths
lastvisit
2019-04-24T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
yes
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:00:00
sp05time
study ended
study_complt_stat
yes
tbtreat
0.001812835
templateDNA_16SqPCR
26.29528499
templateDNA_16SqPCR_Cq
2555.794103
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 48
visit
no
visit012
no
visit018
no
visit1218
2019-04-24T00:00:00
visit_date
5
visittotno
4.1903319
vllog
15500
vload
29.2
weight
C05
well
-3.4301593
zbmiuk
-3.7180734
zhauk
-5.6083689
zwauk
no
zymo_DNA