MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2007-05-03T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246714
External Id
0.752655527
FEV1FVC
-1.983235221
FEV1FVCZ
1.24000001
FEV1_baseline
76.59774304
FEVpcpred
1.647500038
FVC
-0.81530276
FVCZ
89.91258523
FVCpcpred
12472
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:35Z
INSDC first public
2022-11-29T01:24:35Z
INSDC last update
public
INSDC status
36135
RawReads_ASVpipeline
SRS10548240
SRA accession
BSP0681
Submitter Id
no
acut_exac12m
Adherent
adherence
no
adm
3.8
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
yes
attendschool
BSP0681
barcode
806rcbc184
barcode_806R
NCBI
broker name
2019-06-03
collection_date
yes
cotrimoxazole
no
cough_enrl
2011-02-20T00:00:00
dateart
2011-02-01T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
6.9
duryart
2019-06-03T00:00:00
endfollowup
['NA', '2018-12-17T00:00:00']
endtreatdate
2018-01
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.804961911
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
12
host_age
14.6984
host_body_mass_index
HIV-associated chronic lung disease
host_disease
76.59774304
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1157
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
GACTCGAATCGT
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-06-03T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R1
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:00:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.512224584
templateDNA_16SqPCR
18.45853237
templateDNA_16SqPCR_Cq
722151.01
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2019-06-03T00:00:00
visit_date
7
visittotno
26
weight
A11
well
-1.7687768
zbmiuk
-2.1860523
zhauk
-2.6128678
zwauk
no
zymo_DNA