MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2001-09-10T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246962
External Id
0.846615257
FEV1FVC
-0.551070321
FEV1FVCZ
2.47
FEV1_baseline
79.06523637
FEVpcpred
2.917500019
FVC
-1.439611014
FVCZ
82.11101807
FVCpcpred
4906
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:36Z
INSDC first public
2022-11-29T01:24:36Z
INSDC last update
public
INSDC status
19558
RawReads_ASVpipeline
SRS10548873
SRA accession
BYE138T3
Submitter Id
no
acut_exac12m
Not Adherent
adherence
no
adm
4.76
ageyart
no
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BYE138T3
barcode
806rcbc44
barcode_806R
NCBI
broker name
2019-02-20
collection_date
yes
cotrimoxazole
no
cough_enrl
2006-06-15T00:00:00
dateart
2006-06-15T00:00:00
datehiv
11.3
duryart
2019-02-20T00:00:00
endfollowup
['NA', '2018-09-05T00:00:00']
endtreatdate
2017-10
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-1.586631927
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
17.4
host_age
20.95717
host_body_mass_index
HIV-associated chronic lung disease
host_disease
79.06523637
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B3051
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
CGATCCGTATTA
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-02-20T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
no
one_visit
yes
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R1
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
11:20:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.205185296
templateDNA_16SqPCR
19.88918276
templateDNA_16SqPCR_Cq
289276.95
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 72
visit
no
visit012
yes
visit018
no
visit1218
2019-02-20T00:00:00
visit_date
7
visittotno
55
weight
E05
well
0.079907447
zbmiuk
-2.0594926
zhauk
-1.2974368
zwauk
no
zymo_DNA