MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2008-02-08T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248109
External Id
0.87972504
FEV1FVC
-0.040558077
FEV1FVCZ
1.279999971
FEV1_baseline
89.13072731
FEVpcpred
1.455000043
FVC
-0.855808885
FVCZ
89.28856841
FVCpcpred
14387
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:50Z
INSDC first public
2022-11-29T01:24:50Z
INSDC last update
public
INSDC status
40724
RawReads_ASVpipeline
SRS10620677
SRA accession
BSP0382
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
5.64
ageyart
no
all_3
no
antibiotic12m
0
any3_reasons
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
yes
attendschool
BSP0382
barcode
806rcbc323
barcode_806R
NCBI
broker name
262
cd4
2018-04-19
collection_date
yes
cotrimoxazole
no
cough_enrl
2013-09-30T00:00:00
dateart
2013-09-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
3.63
duryart
2018-10-04T00:00:00
endfollowup
['NA', '2018-04-19T00:00:00']
endtreatdate
2017-05
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-0.867087045
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
10.1
host_age
14.731017
host_body_mass_index
HIV-associated chronic lung disease
host_disease
89.13072731
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1074
host_subject_id
human respiratory
host_tissue_sampled
ATGAGTTGGAAG
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-10-04T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
yes
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['1.5', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
12:09:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.052018765
templateDNA_16SqPCR
21.57007236
templateDNA_16SqPCR_Cq
73337.7602
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 48
visit
yes
visit012
no
visit018
no
visit1218
2018-04-19T00:00:00
visit_date
7
visittotno
2.4814427
vllog
303
vload
24.4
weight
C04
well
-1.1559676
zbmiuk
-1.7061292
zhauk
-1.9044536
zwauk
no
zymo_DNA