MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2000-10-28T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246597
External Id
0.943589756
FEV1FVC
0.667107563
FEV1FVCZ
2.76
FEV1_baseline
115.0214598
FEVpcpred
2.924999952
FVC
0.77269476
FVCZ
110.3353781
FVCpcpred
17701
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:33Z
INSDC first public
2022-11-29T01:24:33Z
INSDC last update
public
INSDC status
53564
RawReads_ASVpipeline
SRS10548178
SRA accession
BSP0148
Submitter Id
no
adm
8.02
ageyart
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0148
barcode
806rcbc3
barcode_806R
NCBI
broker name
825
cd4
2017-08-21
collection_date
yes
cotrimoxazole
2008-11-04T00:00:00
dateart
2005-10-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
8.79
duryart
['NA', 'not applicable']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
1.1787196
fev1z
Zimbabwe: Harare
geo_loc_name
comparison group
group
Homo sapiens
host
16.8
host_age
18.19795
host_body_mass_index
No HIV-associated chronic lung disease
host_disease
115.0214598
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
C114
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
ACACCTGGTGAT
index_sequence
sputum
isolation_source
17.82 S 31.04 E
lat_lon
yes
one_visit
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R1
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
11:13:00
sp05time
no
tbtreat
0.034199133
templateDNA_16SqPCR
22.44044701
templateDNA_16SqPCR_Cq
48215.06
templateDNA_16SqPCR_copies
human sputum metagenome
title
Week 0
visit
2017-08-21T00:00:00
visit_date
92
vload
41
weight
D12
well
-1.131097
zbmiuk
-2.2107267
zhauk
-2.4689987
zwauk
no
zymo_DNA