MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2008-03-22T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22108635
External Id
0.892101184
FEV1FVC
0.002230363
FEV1FVCZ
1.080000043
FEV1_baseline
87.81741169
FEVpcpred
1.210625052
FVC
-0.964235394
FVCZ
87.92379376
FVCpcpred
13065
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:29Z
INSDC first public
2022-11-29T01:24:29Z
INSDC last update
public
INSDC status
36596
RawReads_ASVpipeline
SRS10483913
SRA accession
BSP0393
Submitter Id
yes
acut_exac12m
Adherent
adherence
no
adm
3.02
ageyart
yes
all_3
no
antibiotic12m
1
any3_reasons
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
yes
attendschool
BSP0393
barcode
806rcbc77
barcode_806R
NCBI
broker name
405
cd4
2018-05-04
collection_date
yes
cotrimoxazole
no
cough_enrl
2011-03-31T00:00:00
dateart
2010-07-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
6.17
duryart
2018-10-19T00:00:00
endfollowup
['NA', '2018-05-04T00:00:00']
endtreatdate
2017-06
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-0.97061103
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
10.1
host_age
13.588454
host_body_mass_index
HIV-associated chronic lung disease
host_disease
87.81741169
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1080
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
ACGGGACATGCT
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-10-19T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R1
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
08:55:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.047067596
templateDNA_16SqPCR
22.02510946
templateDNA_16SqPCR_Cq
66357.44
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 48
visit
yes
visit012
yes
visit018
yes
visit1218
2018-05-04T00:00:00
visit_date
7
visittotno
2.089905
vllog
123
vload
19.6
weight
F09
well
-2.1160624
zbmiuk
-3.0308878
zhauk
-3.8542998
zwauk
no
zymo_DNA