MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2005-04-03T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249146
External Id
0.687179487
FEV1FVC
-2.767090871
FEV1FVCZ
1.34
FEV1_baseline
58.83592253
FEVpcpred
1.950000048
FVC
-1.811417989
FVCZ
76.98882835
FVCpcpred
21076
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:44Z
INSDC first public
2022-11-29T01:24:44Z
INSDC last update
public
INSDC status
42219
RawReads_ASVpipeline
SRS10550539
SRA accession
BYD112T3
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
all_3
no
antibiotic12m
0
any3_reasons
BYD112T3
barcode
806rcbc284
barcode_806R
NCBI
broker name
896
cd4
2018-07-30
collection_date
['NA', 'missing']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-3.078039212
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
13.3
host_age
16.793629
host_body_mass_index
HIV-associated chronic lung disease
host_disease
58.83592253
host_height
yes
host_hiv_stat
B3040
host_subject_id
human respiratory
host_tissue_sampled
CGCACATGTTAT
index_sequence
sputum
isolation_source
15.77 S 35.02 E
lat_lon
no
one_visit
yes
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:48:00
sp05time
0.532166462
templateDNA_16SqPCR
17.97069793
templateDNA_16SqPCR_Cq
750265.7208
templateDNA_16SqPCR_copies
human sputum metagenome
title
Placebo
trial_arm
Week 48
visit
no
visit012
no
visit018
yes
visit1218
2018-07-30T00:00:00
visit_date
1.5910646
vllog
39
vload
38.8
weight
D11
well
-1.0250348
zbmiuk
-0.71376932
zhauk
-1.1525203
zwauk
no
zymo_DNA