MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1999-05-12T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248055
External Id
0.722382333
FEV1FVC
-2.420344189
FEV1FVCZ
0.94
FEV1_baseline
37.35958878
FEVpcpred
1.301249981
FVC
-4.263236074
FVCZ
46.53369474
FVCpcpred
22370
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:51Z
INSDC first public
2022-11-29T01:24:51Z
INSDC last update
public
INSDC status
40751
RawReads_ASVpipeline
SRS10620721
SRA accession
BSP0053
Submitter Id
Not abnormal
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
yes
acut_exac12m
Adherent
adherence
no
adm
12.26
ageyart
yes
all_3
no
antibiotic12m
1
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
no
attendschool
BSP0053
barcode
806rcbc38
barcode_806R
NCBI
broker name
23
cd4
2017-02-07
collection_date
yes
cotrimoxazole
yes
cough_enrl
2011-08-15T00:00:00
dateart
2009-06-15T00:00:00
datehiv
5.48
duryart
2018-06-26T00:00:00
endfollowup
['2018-01-09T00:00:00', '2018-01-09T00:00:00']
endtreatdate
2017-02
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-4.5645032
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
17.7
host_age
20.81946
host_body_mass_index
HIV-associated chronic lung disease
host_disease
37.35958878
host_height
yes
host_hiv_stat
female
host_sex
B1050
host_subject_id
human respiratory
host_tissue_sampled
CGGAGCTATGGT
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-06-26T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:11:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.052439494
templateDNA_16SqPCR
21.37436757
templateDNA_16SqPCR_Cq
73930.9174
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 0
visit
yes
visit012
yes
visit018
yes
visit1218
2017-02-03T00:00:00
visit_date
7
visittotno
4.0791812
vllog
12000
vload
48.8
weight
G04
well
-0.10973904
zbmiuk
-1.7276715
zhauk
-1.1986257
zwauk
no
zymo_DNA