M
BRrepeats
MIGS/MIMS/MIMARKS.host-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2005-11-15T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248946
External Id
0.8241758
FEV1FVC
-0.890849702
FEV1FVCZ
1.5
FEV1_baseline
78.7291985
FEVpcpred
1.820000052
FVC
-1.309957716
FVCZ
83.82404463
FVCpcpred
16144
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:39Z
INSDC first public
2022-11-29T01:24:39Z
INSDC last update
public
INSDC status
35534
RawReads_ASVpipeline
SRS10550330
SRA accession
BSP0455
Submitter Id
Abnormal HR
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
5.66
ageyart
no
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0455
barcode
806rcbc45
barcode_806R
NCBI
broker name
505
cd4
2018-07-11
collection_date
yes
cotrimoxazole
no
cough_enrl
2011-07-15T00:00:00
dateart
2005-12-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
6.99
duryart
2019-06-17T00:00:00
endfollowup
['2019-06-17T00:00:00', '2019-06-17T00:00:00']
endtreatdate
2018-07
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-1.6186656
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
12.6
host_age
13.806386
host_body_mass_index
HIV-associated chronic lung disease
host_disease
78.7291985
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1221
host_subject_id
human respiratory
host_tissue_sampled
GTCTAATTCCGA
index_sequence
sputum
isolation_source
12 mths
lastvisit
2019-06-17T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
yes
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['1.5', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:10:00
sp05time
study ended
study_complt_stat
yes
tbtreat
0.011958959
templateDNA_16SqPCR
23.53630311
templateDNA_16SqPCR_Cq
16860.13186
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 0
visit
yes
visit012
no
visit018
no
visit1218
2018-07-06T00:00:00
visit_date
5
visittotno
1.5910646
vllog
39
vload
27.8
weight
F05
well
-2.7828231
zbmiuk
-1.3710412
zhauk
-2.4939499
zwauk
no
zymo_DNA