MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2002-07-09T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246667
External Id
0.861096824
FEV1FVC
-0.709135785
FEV1FVCZ
2.099999905
FEV1_baseline
79.30948409
FEVpcpred
2.438750029
FVC
-1.313915047
FVCZ
82.91287755
FVCpcpred
7179
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:34Z
INSDC first public
2022-11-29T01:24:34Z
INSDC last update
public
INSDC status
30297
RawReads_ASVpipeline
SRS10548218
SRA accession
BSP0507
Submitter Id
no
acut_exac12m
Adherent
adherence
no
adm
6.93
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0507
barcode
806rcbc94
barcode_806R
NCBI
broker name
155
cd4
2018-08-28
collection_date
yes
cotrimoxazole
no
cough_enrl
2009-06-15T00:00:00
dateart
2009-05-01T00:00:00
datehiv
8.28
duryart
2019-02-12T00:00:00
endfollowup
['NA', '2018-08-28T00:00:00']
endtreatdate
2017-09
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.578572083
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
16.1
host_age
15.099893
host_body_mass_index
HIV-associated chronic lung disease
host_disease
79.30948409
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B1128
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
GAATAGAGCCAA
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-02-12T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
R1
run_processing_batch
stored in primestore
samp_mat_process
['NA', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
completed 18 months
study_complt_stat
no
tbtreat
5.523272867
templateDNA_16SqPCR
15.11225618
templateDNA_16SqPCR_Cq
7786891.12
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 48
visit
yes
visit012
yes
visit018
yes
visit1218
2018-08-28T00:00:00
visit_date
7
visittotno
1.5910646
vllog
39
vload
37.6
weight
G11
well
-2.9072645
zbmiuk
-0.90259802
zhauk
-3.0108237
zwauk
no
zymo_DNA