MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2001-04-21T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246735
External Id
0.691122213
FEV1FVC
-2.643026533
FEV1FVCZ
1.99000001
FEV1_baseline
68.22690701
FEVpcpred
2.879374981
FVC
-0.927983091
FVCZ
87.75494563
FVCpcpred
10841
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:36Z
INSDC first public
2022-11-29T01:24:36Z
INSDC last update
public
INSDC status
42210
RawReads_ASVpipeline
SRS10548288
SRA accession
BSP0742
Submitter Id
no
acut_exac12m
Adherent
adherence
no
adm
13.03
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0742
barcode
806rcbc361
barcode_806R
NCBI
broker name
2019-08-21
collection_date
yes
cotrimoxazole
no
cough_enrl
2014-05-04T00:00:00
dateart
2003-06-04T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
3.92
duryart
2019-08-21T00:00:00
endfollowup
['NA', '2019-03-06T00:00:00']
endtreatdate
2018-04
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-2.397271621
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
18.3
host_age
23.973309
host_body_mass_index
HIV-associated chronic lung disease
host_disease
68.22690701
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B1199
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
ACGGCCAATCGA
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-08-21T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R1
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:50:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.021113186
templateDNA_16SqPCR
23.15075537
templateDNA_16SqPCR_Cq
29766.06
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2019-08-21T00:00:00
visit_date
7
visittotno
64.4
weight
A09
well
0.87678725
zbmiuk
0.049653485
zhauk
0.75233793
zwauk
no
zymo_DNA