MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1998-06-03T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248052
External Id
0
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:51Z
INSDC first public
2022-11-29T01:24:51Z
INSDC last update
public
INSDC status
12
RawReads_ASVpipeline
SRS10620707
SRA accession
BSP0043
Submitter Id
Adherent
adherence
no
adm
7.03
ageyart
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
no
attendschool
BSP0043
barcode
806rcbc5
barcode_806R
NCBI
broker name
2017-01-04
collection_date
yes
cotrimoxazole
no
cough_enrl
2005-06-15T00:00:00
dateart
11.56
duryart
2018-05-23T00:00:00
endfollowup
['not applicable', '2017-12-06T00:00:00']
endtreatdate
2017-01
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
Zimbabwe: Harare
geo_loc_name
trial
group
Homo sapiens
host
18.5
host_age
HIV-associated chronic lung disease
host_disease
yes
host_hiv_stat
female
host_sex
B1041
host_subject_id
human respiratory
host_tissue_sampled
TTACTGTGCGAT
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-05-23T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['not applicable', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
completed 18 months
study_complt_stat
no
tbtreat
0.426150309
templateDNA_16SqPCR
18.4771955
templateDNA_16SqPCR_Cq
600800.6736
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 0
visit
7
visittotno
F12
well
no
zymo_DNA