MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1999-02-20T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22108644
External Id
0.890406252
FEV1FVC
-0.238842267
FEV1FVCZ
1.629999995
FEV1_baseline
74.41285396
FEVpcpred
1.830625057
FVC
-1.877672056
FVCZ
75.4453462
FVCpcpred
19185
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:32Z
INSDC first public
2022-11-29T01:24:32Z
INSDC last update
public
INSDC status
45475
RawReads_ASVpipeline
SRS10484022
SRA accession
BSP0416
Submitter Id
no
acut_exac12m
Adherent
adherence
no
adm
12.31
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
no
attendschool
BSP0416
barcode
806rcbc1
barcode_806R
NCBI
broker name
2018-06-06
collection_date
yes
cotrimoxazole
no
cough_enrl
2011-06-15T00:00:00
dateart
2011-06-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
5.6
duryart
2018-06-06T00:00:00
endfollowup
['NA', '2018-01-10T00:00:00']
endtreatdate
2017-01
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.940040016
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
19.2
host_age
22.854229
host_body_mass_index
HIV-associated chronic lung disease
host_disease
74.41285396
host_height
yes
host_hiv_stat
female
host_sex
B1045
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
AATCAGTCTCGT
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-06-06T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R1
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
08:45:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.20974225
templateDNA_16SqPCR
19.76936113
templateDNA_16SqPCR_Cq
295701.5
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2018-06-06T00:00:00
visit_date
7
visittotno
46.8
weight
B12
well
0.44888172
zbmiuk
-3.3992417
zhauk
-1.6186666
zwauk
no
zymo_DNA