MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1999-09-16T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246654
External Id
0.913252982
FEV1FVC
0.565829082
FEV1FVCZ
3.79
FEV1_baseline
115.9109837
FEVpcpred
4.150000095
FVC
0.865064932
FVCZ
110.84324
FVCpcpred
18704
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:34Z
INSDC first public
2022-11-29T01:24:34Z
INSDC last update
public
INSDC status
45249
RawReads_ASVpipeline
SRS10548193
SRA accession
BSP0459
Submitter Id
Y
WRrepeats
Y
WRrepeats_WP
no
adm
11.67
ageyart
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0459
barcode
806rcbc255
barcode_806R
NCBI
broker name
336
cd4
2018-07-17
collection_date
yes
cotrimoxazole
2011-05-18T00:00:00
dateart
2011-05-01T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
7.16
duryart
['NA', 'not applicable']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
1.2594075
fev1z
Zimbabwe: Harare
geo_loc_name
comparison group
group
Homo sapiens
host
18.8
host_age
21.94219
host_body_mass_index
No HIV-associated chronic lung disease
host_disease
115.9109837
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
C141
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
CACGAGGTCATT
index_sequence
sputum
isolation_source
17.82 S 31.04 E
lat_lon
yes
one_visit
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R1
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
11:25:00
sp05time
yes
tbtreat
0.030367183
templateDNA_16SqPCR
22.59588037
templateDNA_16SqPCR_Cq
42812.65
templateDNA_16SqPCR_copies
human sputum metagenome
title
Week 0
visit
2018-07-17T00:00:00
visit_date
607
vload
58.8
weight
G07
well
0.18796386
zbmiuk
-1.9461877
zhauk
-1.1673181
zwauk
no
zymo_DNA