MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2001-01-13T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22250760
External Id
0.829284084
FEV1FVC
-1.209132873
FEV1FVCZ
1.600000024
FEV1_baseline
64.57640793
FEVpcpred
1.929375052
FVC
-2.304067103
FVCZ
70.35807029
FVCpcpred
16596
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:47Z
INSDC first public
2022-11-29T01:24:47Z
INSDC last update
public
INSDC status
33907
RawReads_ASVpipeline
SRS10620549
SRA accession
BSP0168
Submitter Id
Abnormal HR
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
yes
acut_exac12m
Not Adherent
adherence
no
adm
8.83
ageyart
yes
all_3
no
antibiotic12m
2
any3_reasons
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
yes
attendschool
BSP0168
barcode
806rcbc78
barcode_806R
NCBI
broker name
67
cd4
2017-09-07
collection_date
yes
cotrimoxazole
no
cough_enrl
2009-11-13T00:00:00
dateart
2009-10-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
6.9
duryart
2018-02-23T00:00:00
endfollowup
['NA', '2017-09-07T00:00:00']
endtreatdate
2016-10
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-2.665165036
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
yes
hospitalised12m
Homo sapiens
host
16.6
host_age
18.919645
host_body_mass_index
HIV-associated chronic lung disease
host_disease
64.57640793
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B1019
host_subject_id
human respiratory
host_tissue_sampled
GTCATATCGTAC
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-02-23T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
gastritis
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R3
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:11:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
0.021907394
templateDNA_16SqPCR
23.21353339
templateDNA_16SqPCR_Cq
30885.7617
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 48
visit
yes
visit012
yes
visit018
yes
visit1218
2017-09-07T00:00:00
visit_date
7
visittotno
3.8254261
vllog
6690
vload
44
weight
G09
well
-0.75207579
zbmiuk
-1.8083405
zhauk
-1.8613552
zwauk
no
zymo_DNA