MIGS/MIMS/MIMARKS.host-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2004-02-18T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249018
External Id
0.814459588
FEV1FVC
-1.546133427
FEV1FVCZ
1.379999995
FEV1_baseline
69.62500715
FEVpcpred
1.694375038
FVC
-1.671392094
FVCZ
78.45303055
FVCpcpred
19714
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:42Z
INSDC first public
2022-11-29T01:24:42Z
INSDC last update
public
INSDC status
38335
RawReads_ASVpipeline
SRS10550443
SRA accession
BSP0709
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Abnormal Sat
abnsat
yes
acut_exac12m
Adherent
adherence
no
adm
8.49
ageyart
yes
all_3
no
antibiotic12m
1
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0709
barcode
806rcbc282
barcode_806R
NCBI
broker name
2019-06-28
collection_date
yes
cotrimoxazole
no
cough_enrl
2012-08-15T00:00:00
dateart
2007-09-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
5.48
duryart
2019-06-28T00:00:00
endfollowup
['NA', '2019-01-07T00:00:00']
endtreatdate
2018-02
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-2.296573902
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
15.3
host_age
15.847984
host_body_mass_index
HIV-associated chronic lung disease
host_disease
69.62500715
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B1172
host_subject_id
human respiratory
host_tissue_sampled
GTAAGCACCTAC
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-06-28T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:00:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.031517414
templateDNA_16SqPCR
22.12604915
templateDNA_16SqPCR_Cq
44434.28369
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2019-06-28T00:00:00
visit_date
7
visittotno
30.4
weight
B11
well
-2.1769361
zbmiuk
-3.9238603
zhauk
-4.4411392
zwauk
no
zymo_DNA