MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1997-07-16T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248098
External Id
0.805931986
FEV1FVC
-1.231530276
FEV1FVCZ
1.970000029
FEV1_baseline
66.95860486
FEVpcpred
2.444375038
FVC
-2.05084003
FVCZ
73.14280969
FVCpcpred
22070
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:50Z
INSDC first public
2022-11-29T01:24:50Z
INSDC last update
public
INSDC status
36697
RawReads_ASVpipeline
SRS10620655
SRA accession
BSP0322
Submitter Id
Abnormal HR
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
9.41
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
no
attendschool
BSP0322
barcode
806rcbc353
barcode_806R
NCBI
broker name
2018-02-28
collection_date
yes
cotrimoxazole
no
cough_enrl
2006-12-14T00:00:00
dateart
2006-06-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
9.83
duryart
2018-02-28T00:00:00
endfollowup
['NA', '2017-09-13T00:00:00']
endtreatdate
2016-10
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-2.483055484
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
20.6
host_age
19.142469
host_body_mass_index
HIV-associated chronic lung disease
host_disease
66.95860486
host_height
yes
host_hiv_stat
female
host_sex
B1023
host_subject_id
human respiratory
host_tissue_sampled
GACTCACTCAAT
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-02-28T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:35:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
1.945063196
templateDNA_16SqPCR
16.24449572
templateDNA_16SqPCR_Cq
2742213.845
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2018-02-28T00:00:00
visit_date
7
visittotno
51.8
weight
A08
well
-1.1552659
zbmiuk
0.1407983
zhauk
-0.84927559
zwauk
no
zymo_DNA