MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2007-12-17T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246623
External Id
0.869752417
FEV1FVC
-0.592386561
FEV1FVCZ
1.01
FEV1_baseline
73.72644602
FEVpcpred
1.161249995
FVC
-1.885495014
FVCZ
76.37272231
FVCpcpred
22954
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:35Z
INSDC first public
2022-11-29T01:24:35Z
INSDC last update
public
INSDC status
52538
RawReads_ASVpipeline
SRS10548260
SRA accession
BSP0313
Submitter Id
no
acut_exac12m
Adherent
adherence
no
adm
6.46
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0313
barcode
806rcbc135
barcode_806R
NCBI
broker name
666
cd4
2018-02-20
collection_date
yes
cotrimoxazole
no
cough_enrl
2014-06-03T00:00:00
dateart
2014-02-14T00:00:00
datehiv
3.72
duryart
2019-07-09T00:00:00
endfollowup
['2019-01-22T00:00:00', '2019-01-22T00:00:00']
endtreatdate
2018-02
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.9920948
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
10.1
host_age
14.678224
host_body_mass_index
HIV-associated chronic lung disease
host_disease
73.72644602
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B1182
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
TGCAATGTTGCT
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-07-09T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
R1
run_processing_batch
stored in primestore
samp_mat_process
['NA', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
study ended
study_complt_stat
yes
tbtreat
0.05206835
templateDNA_16SqPCR
21.88917355
templateDNA_16SqPCR_Cq
73407.67
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 0
visit
yes
visit012
yes
visit018
yes
visit1218
2018-02-15T00:00:00
visit_date
7
visittotno
0
vllog
0
vload
23.6
weight
H04
well
-1.2857618
zbmiuk
-1.9582577
zhauk
-2.0583549
zwauk
no
zymo_DNA