MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2003-05-26T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249161
External Id
0.672176303
FEV1FVC
-2.924010729
FEV1FVCZ
1.22
FEV1_baseline
52.36460995
FEVpcpred
1.815000057
FVC
-2.284833435
FVCZ
70.74266388
FVCpcpred
21183
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:43Z
INSDC first public
2022-11-29T01:24:43Z
INSDC last update
public
INSDC status
44660
RawReads_ASVpipeline
SRS10550497
SRA accession
BYD149T3
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Not Adherent
adherence
no
adm
12.05
ageyart
no
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BYD149T3
barcode
806rcbc358
barcode_806R
NCBI
broker name
701
cd4
2019-01-14
collection_date
yes
cotrimoxazole
no
cough_enrl
2015-06-15T00:00:00
dateart
2015-06-15T00:00:00
datehiv
2.66
duryart
2019-07-01T00:00:00
endfollowup
['NA', '2019-01-14T00:00:00']
endtreatdate
2018-02
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-3.537465429
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
15.6
host_age
16.103777
host_body_mass_index
HIV-associated chronic lung disease
host_disease
52.36460995
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B3077
host_subject_id
human respiratory
host_tissue_sampled
GCACTTTACCAA
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-07-01T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
no
one_visit
yes
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
08:40:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.003985996
templateDNA_16SqPCR
25.34768965
templateDNA_16SqPCR_Cq
5619.587449
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 48
visit
yes
visit012
no
visit018
no
visit1218
2019-01-14T00:00:00
visit_date
7
visittotno
3.2988532
vllog
1990
vload
35.8
weight
F08
well
-2.0821013
zbmiuk
-2.2648716
zhauk
-3.2182896
zwauk
no
zymo_DNA