MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1999-12-02T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248043
External Id
0.820686752
FEV1FVC
-1.061474836
FEV1FVCZ
1.21
FEV1_baseline
45.70191778
FEVpcpred
1.47437501
FVC
-4.097807266
FVCZ
49.6735068
FVCpcpred
16994
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:49Z
INSDC first public
2022-11-29T01:24:49Z
INSDC last update
public
INSDC status
33164
RawReads_ASVpipeline
SRS10620650
SRA accession
BSP0020
Submitter Id
B
WRrepeats
B
WRrepeats_WP
Not abnormal
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
yes
acut_exac12m
Adherent
adherence
no
adm
13.22
ageyart
yes
all_3
no
antibiotic12m
1
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0020
barcode
806rcbc209
barcode_806R
NCBI
broker name
241
cd4
2016-10-07
collection_date
yes
cotrimoxazole
no
cough_enrl
2013-02-20T00:00:00
dateart
2013-01-01T00:00:00
datehiv
3.63
duryart
2018-02-23T00:00:00
endfollowup
['2017-09-08T00:00:00', '2017-09-08T00:00:00']
endtreatdate
2016-10
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-3.9640691
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
16.8
host_age
17.712273
host_body_mass_index
HIV-associated chronic lung disease
host_disease
45.70191778
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1020
host_subject_id
human respiratory
host_tissue_sampled
ACACGAGCCACA
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-02-23T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:01:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.129344604
templateDNA_16SqPCR
20.18
templateDNA_16SqPCR_Cq
182354.2623
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 0
visit
yes
visit012
yes
visit018
yes
visit1218
2016-09-30T00:00:00
visit_date
7
visittotno
4.7275414
vllog
53400
vload
40.6
weight
A02
well
-1.3688768
zbmiuk
-3.3416319
zhauk
-3.3863382
zwauk
no
zymo_DNA