MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2006-01-11T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246967
External Id
0.868994399
FEV1FVC
-0.640426686
FEV1FVCZ
1.82
FEV1_baseline
103.4813855
FEVpcpred
2.094374895
FVC
0.602397576
FVCZ
107.8250835
FVCpcpred
20789
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:37Z
INSDC first public
2022-11-29T01:24:37Z
INSDC last update
public
INSDC status
52299
RawReads_ASVpipeline
SRS10548918
SRA accession
BYF10LT3
Submitter Id
no
adm
2.43
ageyart
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BYF10LT3
barcode
806rcbc82
barcode_806R
NCBI
broker name
1287
cd4
2018-05-28
collection_date
yes
cotrimoxazole
2008-06-15T00:00:00
dateart
2008-06-15T00:00:00
datehiv
10.01
duryart
['NA', 'not applicable']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
0.27091503
fev1z
Malawi: Blantyre
geo_loc_name
comparison group
group
Homo sapiens
host
12.3
host_age
22.910118
host_body_mass_index
No HIV-associated chronic lung disease
host_disease
103.4813855
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
C321
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
ACTGACAGCCAT
index_sequence
sputum
isolation_source
15.77 S 35.02 E
lat_lon
yes
one_visit
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
rs14antib
R1
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
11:15:00
sp05time
no
tbtreat
0.022177494
templateDNA_16SqPCR
23.11678101
templateDNA_16SqPCR_Cq
31266.56
templateDNA_16SqPCR_copies
human sputum metagenome
title
Week 0
visit
2018-05-26T00:00:00
visit_date
0
vload
43
weight
C10
well
1.4765602
zbmiuk
-2.1536031
zhauk
0.06860476
zwauk
no
zymo_DNA