MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1999-09-18T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246694
External Id
0.722798372
FEV1FVC
-2.060785082
FEV1FVCZ
2.569999933
FEV1_baseline
71.78407274
FEVpcpred
3.555624962
FVC
-1.129344661
FVCZ
85.93103047
FVCpcpred
18610
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:34Z
INSDC first public
2022-11-29T01:24:34Z
INSDC last update
public
INSDC status
42324
RawReads_ASVpipeline
SRS10548214
SRA accession
BSP0624
Submitter Id
no
acut_exac12m
Adherent
adherence
no
adm
9.08
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
yes
attendschool
BSP0624
barcode
806rcbc160
barcode_806R
NCBI
broker name
2019-02-07
collection_date
yes
cotrimoxazole
no
cough_enrl
2008-10-15T00:00:00
dateart
2008-08-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
8.93
duryart
2019-02-07T00:00:00
endfollowup
['NA', '2018-08-23T00:00:00']
endtreatdate
2017-09
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-2.175090443
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
19.3
host_age
19.630877
host_body_mass_index
HIV-associated chronic lung disease
host_disease
71.78407274
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1123
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
GTCCGAAACACT
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-02-07T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R1
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:13:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
0.619493847
templateDNA_16SqPCR
18.17321216
templateDNA_16SqPCR_Cq
873382.73
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2019-02-07T00:00:00
visit_date
7
visittotno
56.8
weight
A08
well
-0.93837506
zbmiuk
-1.0323304
zhauk
-1.5645392
zwauk
no
zymo_DNA