MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2006-03-29T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249136
External Id
0.834706237
FEV1FVC
-1.116834956
FEV1FVCZ
0.95
FEV1_baseline
52.19736135
FEVpcpred
1.138124943
FVC
-3.552937209
FVCZ
56.30680416
FVCpcpred
15815
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:44Z
INSDC first public
2022-11-29T01:24:44Z
INSDC last update
public
INSDC status
37645
RawReads_ASVpipeline
SRS10550506
SRA accession
BYC12PT3
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
yes
adm
6.21
ageyart
no
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
BYC12PT3
barcode
806rcbc29
barcode_806R
NCBI
broker name
466
cd4
2018-05-09
collection_date
no
cotrimoxazole
no
cough_enrl
2012-06-15T00:00:00
dateart
2007-06-15T00:00:00
datehiv
5.9
duryart
2019-04-10T00:00:00
endfollowup
['2019-04-10T00:00:00', '2019-04-10T00:00:00']
endtreatdate
2018-05
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
4
f24mrcscore
-3.5498765
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
12.1
host_age
16.530613
host_body_mass_index
HIV-associated chronic lung disease
host_disease
52.19736135
host_height
yes
host_hiv_stat
female
host_sex
B3096
host_subject_id
human respiratory
host_tissue_sampled
ATCCCGAATTTG
index_sequence
sputum
isolation_source
12 mths
lastvisit
2019-04-10T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
1
nadm
yes
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:00:00
sp05time
study ended
study_complt_stat
no
tbtreat
0.00278297
templateDNA_16SqPCR
25.66628993
templateDNA_16SqPCR_Cq
3923.52241
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 0
visit
no
visit012
no
visit018
no
visit1218
2018-05-02T00:00:00
visit_date
5
visittotno
0
vllog
32.4
weight
F03
well
-0.78991354
zbmiuk
-1.4615821
zhauk
-1.2974173
zwauk
no
zymo_DNA