MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2000-10-12T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248101
External Id
0.949889355
FEV1FVC
1.221675743
FEV1FVCZ
2.950000048
FEV1_baseline
88.3715029
FEVpcpred
3.105624914
FVC
-1.50301043
FVCZ
81.3283665
FVCpcpred
13803
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:50Z
INSDC first public
2022-11-29T01:24:50Z
INSDC last update
public
INSDC status
26025
RawReads_ASVpipeline
SRS10620662
SRA accession
BSP0328
Submitter Id
Not abnormal
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
8.7
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
yes
attendschool
BSP0328
barcode
806rcbc214
barcode_806R
NCBI
broker name
2018-03-05
collection_date
no
cotrimoxazole
no
cough_enrl
2009-06-23T00:00:00
dateart
2007-12-11T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
7.34
duryart
2018-03-05T00:00:00
endfollowup
['NA', '2017-10-02T00:00:00']
endtreatdate
2016-10
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-0.886610273
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
17.3
host_age
17.497938
host_body_mass_index
HIV-associated chronic lung disease
host_disease
88.3715029
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1030
host_subject_id
human respiratory
host_tissue_sampled
TGACCGGTCAAT
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-03-05T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
11:34:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
0.388019454
templateDNA_16SqPCR
18.58
templateDNA_16SqPCR_Cq
547042.5443
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2018-03-05T00:00:00
visit_date
7
visittotno
48.8
weight
F02
well
-1.6592516
zbmiuk
-1.3427614
zhauk
-2.227438
zwauk
no
zymo_DNA