MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2002-12-01T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246697
External Id
0.959081074
FEV1FVC
0.878918093
FEV1FVCZ
1.669999957
FEV1_baseline
76.29119719
FEVpcpred
1.741250038
FVC
-2.135204255
FVCZ
72.52444017
FVCpcpred
11009
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:36Z
INSDC first public
2022-11-29T01:24:36Z
INSDC last update
public
INSDC status
43883
RawReads_ASVpipeline
SRS10548270
SRA accession
BSP0631
Submitter Id
no
acut_exac12m
Not Adherent
adherence
no
adm
8.62
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
yes
attendschool
BSP0631
barcode
806rcbc304
barcode_806R
NCBI
broker name
723
cd4
2019-02-12
collection_date
no
cotrimoxazole
no
cough_enrl
2011-07-15T00:00:00
dateart
2011-05-12T00:00:00
datehiv
6.66
duryart
2019-07-30T00:00:00
endfollowup
['NA', '2019-02-12T00:00:00']
endtreatdate
2018-03
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.803944954
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
16.2
host_age
19.429018
host_body_mass_index
HIV-associated chronic lung disease
host_disease
76.29119719
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B1188
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
AGCTATCCACGA
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-07-30T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R1
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
11:10:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
1.358
templateDNA_16SqPCR
17.09
templateDNA_16SqPCR_Cq
1914552.91
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 48
visit
yes
visit012
yes
visit018
yes
visit1218
2019-02-12T00:00:00
visit_date
7
visittotno
3.8182259
vllog
6580
vload
40.4
weight
H01
well
-0.4455128
zbmiuk
-3.1449687
zhauk
-2.437427
zwauk
no
zymo_DNA