MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2003-12-11T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22250755
External Id
0.913778746
FEV1FVC
0.139157791
FEV1FVCZ
2.0599999430000002
FEV1_baseline
95.16534292
FEVpcpred
2.254374981
FVC
-0.442634871
FVCZ
94.26622605
FVCpcpred
26758
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:47Z
INSDC first public
2022-11-29T01:24:47Z
INSDC last update
public
INSDC status
46798
RawReads_ASVpipeline
SRS10620529
SRA accession
BSP0146
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
2.93
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0146
barcode
806rcbc173
barcode_806R
NCBI
broker name
859
cd4
2017-08-18
collection_date
yes
cotrimoxazole
no
cough_enrl
2006-11-15T00:00:00
dateart
2006-09-15T00:00:00
datehiv
9.84
duryart
2018-02-02T00:00:00
endfollowup
['NA', '2017-08-18T00:00:00']
endtreatdate
2016-09
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-0.373701998
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
13.6
host_age
18.385521
host_body_mass_index
HIV-associated chronic lung disease
host_disease
95.16534292
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B1013
host_subject_id
human respiratory
host_tissue_sampled
AGAGCCTACGTT
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-02-02T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R3
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:35:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.019543945
templateDNA_16SqPCR
23.17191636
templateDNA_16SqPCR_Cq
27553.69416
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 48
visit
yes
visit012
yes
visit018
yes
visit1218
2017-08-18T00:00:00
visit_date
7
visittotno
2.4871383
vllog
307
vload
40
weight
F09
well
-0.34794083
zbmiuk
-1.6396513
zhauk
-1.2220715
zwauk
no
zymo_DNA