MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2006-04-18T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249158
External Id
0.883546195
FEV1FVC
-0.023331298
FEV1FVCZ
1.47
FEV1_baseline
84.35650469
FEVpcpred
1.663750052
FVC
-1.251690467
FVCZ
84.5399529
FVCpcpred
7694
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:43Z
INSDC first public
2022-11-29T01:24:43Z
INSDC last update
public
INSDC status
16182
RawReads_ASVpipeline
SRS10550488
SRA accession
BYD141T3
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Not Adherent
adherence
yes
all_3
no
antibiotic12m
0
any3_reasons
BYD141T3
barcode
806rcbc59
barcode_806R
NCBI
broker name
1002
cd4
2019-01-07
collection_date
['NA', 'missing']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
3
f24mrcscore
-1.191748229
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
12.7
host_age
14.057094
host_body_mass_index
HIV-associated chronic lung disease
host_disease
84.35650469
host_height
yes
host_hiv_stat
B3067
host_subject_id
human respiratory
host_tissue_sampled
GGTGTCTATTGT
index_sequence
sputum
isolation_source
15.77 S 35.02 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:20:00
sp05time
0.021386633
templateDNA_16SqPCR
22.68589315
templateDNA_16SqPCR_Cq
30151.57685
templateDNA_16SqPCR_copies
human sputum metagenome
title
Azithromycin
trial_arm
Week 48
visit
yes
visit012
yes
visit018
yes
visit1218
2019-01-07T00:00:00
visit_date
0
vllog
0
vload
26
weight
D07
well
-2.5717621
zbmiuk
-2.1948853
zhauk
-3.0410738
zwauk
no
zymo_DNA