MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2000-09-30T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22250795
External Id
0.767540151
FEV1FVC
-1.646077542
FEV1FVCZ
2.269999981
FEV1_baseline
73.43429768
FEVpcpred
2.957499981
FVC
-1.274715964
FVCZ
84.1449703
FVCpcpred
20004
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:45Z
INSDC first public
2022-11-29T01:24:45Z
INSDC last update
public
INSDC status
32955
RawReads_ASVpipeline
SRS10620460
SRA accession
BSP0495
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Not Adherent
adherence
no
adm
10.34
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
yes
attendschool
BSP0495
barcode
806rcbc97
barcode_806R
NCBI
broker name
2018-08-21
collection_date
yes
cotrimoxazole
no
cough_enrl
2011-02-02T00:00:00
dateart
2010-02-11T00:00:00
datehiv
6.17
duryart
2018-08-21T00:00:00
endfollowup
['NA', '2018-03-06T00:00:00']
endtreatdate
2017-04
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-2.017049867
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
17.8
host_age
17.679653
host_body_mass_index
HIV-associated chronic lung disease
host_disease
73.43429768
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1061
host_subject_id
human respiratory
host_tissue_sampled
TGTTATCGCACA
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-08-21T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
R3
run_processing_batch
stored in primestore
samp_mat_process
['1.5', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:20:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.099901071
templateDNA_16SqPCR
21.02585784
templateDNA_16SqPCR_Cq
140843.8044
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2018-08-21T00:00:00
visit_date
7
visittotno
2.636488
vllog
433
vload
45.6
weight
B12
well
-1.6828957
zbmiuk
-2.3392706
zhauk
-3.061506
zwauk
no
zymo_DNA