MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2003-07-24T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248105
External Id
0.775757587
FEV1FVC
-1.8905343
FEV1FVCZ
1.600000024
FEV1_baseline
63.41137377
FEVpcpred
2.0625
FVC
-2.062126852
FVCZ
73.66401038
FVCpcpred
11329
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:51Z
INSDC first public
2022-11-29T01:24:51Z
INSDC last update
public
INSDC status
25192
RawReads_ASVpipeline
SRS10620698
SRA accession
BSP0348
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
3.29
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0348
barcode
806rcbc105
barcode_806R
NCBI
broker name
2018-03-15
collection_date
no
cotrimoxazole
no
cough_enrl
2006-11-08T00:00:00
dateart
2005-07-04T00:00:00
datehiv
9.99
duryart
2018-03-15T00:00:00
endfollowup
['NA', '2017-10-06T00:00:00']
endtreatdate
2016-11
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-2.749083567
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
14.6
host_age
19.214291
host_body_mass_index
HIV-associated chronic lung disease
host_disease
63.41137377
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B1034
host_subject_id
human respiratory
host_tissue_sampled
CTTACACCAAGT
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-03-15T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:35:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
0.062501417
templateDNA_16SqPCR
21.23
templateDNA_16SqPCR_Cq
88116.54555
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2018-03-15T00:00:00
visit_date
7
visittotno
47
weight
B01
well
-0.22278291
zbmiuk
-0.80043995
zhauk
-0.71738195
zwauk
no
zymo_DNA