MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2005-05-03T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249159
External Id
0.882033723
FEV1FVC
-0.012953577
FEV1FVCZ
1.93
FEV1_baseline
90.49218946
FEVpcpred
2.188124895
FVC
-0.759486619
FVCZ
90.59198273
FVCpcpred
14566
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:43Z
INSDC first public
2022-11-29T01:24:43Z
INSDC last update
public
INSDC status
26949
RawReads_ASVpipeline
SRS10550491
SRA accession
BYD142T3
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
7.12
ageyart
no
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BYD142T3
barcode
806rcbc258
barcode_806R
NCBI
broker name
445
cd4
2019-01-07
collection_date
yes
cotrimoxazole
no
cough_enrl
2012-06-15T00:00:00
dateart
2012-06-15T00:00:00
datehiv
5.64
duryart
2019-03-25T00:00:00
endfollowup
['NA', '2019-01-07T00:00:00']
endtreatdate
2018-02
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-0.712746333
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
13.6
host_age
16.138113
host_body_mass_index
HIV-associated chronic lung disease
host_disease
90.49218946
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B3070
host_subject_id
human respiratory
host_tissue_sampled
AAGTGGACTCTC
index_sequence
sputum
isolation_source
15 mths
lastvisit
2019-03-25T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
no
one_visit
yes
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['3', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:30:00
sp05time
study ended
study_complt_stat
no
tbtreat
0.009766697
templateDNA_16SqPCR
23.8503445
templateDNA_16SqPCR_Cq
13769.41008
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 48
visit
yes
visit012
no
visit018
no
visit1218
2019-01-07T00:00:00
visit_date
6
visittotno
0
vllog
0
vload
34.4
weight
B08
well
-1.2989424
zbmiuk
-1.698741
zhauk
-1.8258102
zwauk
no
zymo_DNA