MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2000-10-18T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249123
External Id
0.64396284
FEV1FVC
-3.084564112
FEV1FVCZ
1.3
FEV1_baseline
48.09618227
FEVpcpred
2.018749952
FVC
-2.567745556
FVCZ
67.04960269
FVCpcpred
21862
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:42Z
INSDC first public
2022-11-29T01:24:42Z
INSDC last update
public
INSDC status
38214
RawReads_ASVpipeline
SRS10550460
SRA accession
BYC11BT3
Submitter Id
Not abnormal
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
no
acut_exac12m
Not Adherent
adherence
no
adm
10.82
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BYC11BT3
barcode
806rcbc357
barcode_806R
NCBI
broker name
894
cd4
2017-09-20
collection_date
yes
cotrimoxazole
no
cough_enrl
2011-08-15T00:00:00
dateart
2011-08-15T00:00:00
datehiv
6.1
duryart
2019-02-06T00:00:00
endfollowup
['2018-08-22T00:00:00', '2018-08-22T00:00:00']
endtreatdate
2017-09
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-3.8352733
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
16.9
host_age
20.485792
host_body_mass_index
HIV-associated chronic lung disease
host_disease
48.09618227
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B3043
host_subject_id
human respiratory
host_tissue_sampled
GAGTATGCAGCC
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-02-06T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:15:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.091465293
templateDNA_16SqPCR
20.74014412
templateDNA_16SqPCR_Cq
128950.7683
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 0
visit
yes
visit012
yes
visit018
yes
visit1218
2017-09-16T00:00:00
visit_date
7
visittotno
0
vllog
0
vload
51.4
weight
E08
well
-0.1280048
zbmiuk
-0.84250426
zhauk
-0.71453893
zwauk
no
zymo_DNA