MIGS/MIMS/MIMARKS.host-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2004-08-02T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248976
External Id
0.848044728
FEV1FVC
-0.582860927
FEV1FVCZ
1.897500038
FEV1_baseline
80.05979564
FEVpcpred
2.237499952
FVC
-1.330685384
FVCZ
83.52656024
FVCpcpred
15807
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:41Z
INSDC first public
2022-11-29T01:24:41Z
INSDC last update
public
INSDC status
37719
RawReads_ASVpipeline
SRS10550420
SRA accession
BSP0588
Submitter Id
Not abnormal
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
9.38
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0588
barcode
806rcbc173
barcode_806R
NCBI
broker name
2263
cd4
2019-01-10
collection_date
yes
cotrimoxazole
no
cough_enrl
2013-12-20T00:00:00
dateart
2013-12-02T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
4.1
duryart
2019-06-18T00:00:00
endfollowup
['NA', '2019-01-10T00:00:00']
endtreatdate
2018-01
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.473961065
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
14.4
host_age
15.893865
host_body_mass_index
HIV-associated chronic lung disease
host_disease
80.05979564
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1160
host_subject_id
human respiratory
host_tissue_sampled
AGAGCCTACGTT
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-06-18T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:45:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
0.477834068
templateDNA_16SqPCR
18.26721254
templateDNA_16SqPCR_Cq
673666.1299
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 48
visit
yes
visit012
yes
visit018
yes
visit1218
2019-01-10T00:00:00
visit_date
7
visittotno
3.9400182
vllog
8710
vload
36
weight
F09
well
-1.7502389
zbmiuk
-1.8045206
zhauk
-2.1103292
zwauk
no
zymo_DNA