MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2001-06-04T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22250778
External Id
0.89167668
FEV1FVC
0.191233758
FEV1FVCZ
2.3099999430000002
FEV1_baseline
72.2662675
FEVpcpred
2.590625048
FVC
-2.334744175
FVCZ
71.10585616
FVCpcpred
17238
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:47Z
INSDC first public
2022-11-29T01:24:47Z
INSDC last update
public
INSDC status
29768
RawReads_ASVpipeline
SRS10620553
SRA accession
BSP0323
Submitter Id
Not abnormal
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
8.29
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0323
barcode
806rcbc5
barcode_806R
NCBI
broker name
2018-03-01
collection_date
no
cotrimoxazole
no
cough_enrl
2009-09-17T00:00:00
dateart
2009-08-15T00:00:00
datehiv
7.07
duryart
2018-03-01T00:00:00
endfollowup
['NA', '2017-09-14T00:00:00']
endtreatdate
2016-10
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-2.069976328
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
16.7
host_age
16.602388
host_body_mass_index
HIV-associated chronic lung disease
host_disease
72.2662675
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1024
host_subject_id
human respiratory
host_tissue_sampled
TTACTGTGCGAT
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-03-01T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R3
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
08:36:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
0.120686476
templateDNA_16SqPCR
20.49299638
templateDNA_16SqPCR_Cq
170147.7493
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2018-03-01T00:00:00
visit_date
7
visittotno
2.8162413
vllog
655
vload
45.2
weight
F12
well
-2.0600786
zbmiuk
-1.4273356
zhauk
-2.4408276
zwauk
no
zymo_DNA