MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2005-02-13T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249125
External Id
0.969547896
FEV1FVC
1.535640589
FEV1FVCZ
1.97
FEV1_baseline
87.77027672
FEVpcpred
2.031874895
FVC
-1.508426142
FVCZ
80.85734526
FVCpcpred
15164
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:42Z
INSDC first public
2022-11-29T01:24:42Z
INSDC last update
public
INSDC status
31844
RawReads_ASVpipeline
SRS10550463
SRA accession
BYC11GT3
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
yes
all_3
no
antibiotic12m
0
any3_reasons
BYC11GT3
barcode
806rcbc133
barcode_806R
NCBI
broker name
985
cd4
2017-09-25
collection_date
['2018-08-27T00:00:00', 'missing']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-0.93982214
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
12.6
host_age
24.00786
host_body_mass_index
HIV-associated chronic lung disease
host_disease
87.77027672
host_height
yes
host_hiv_stat
B3045
host_subject_id
human respiratory
host_tissue_sampled
TAACGCTTGGGT
index_sequence
sputum
isolation_source
15.77 S 35.02 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['5', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:15:00
sp05time
0.005799951
templateDNA_16SqPCR
24.69346681
templateDNA_16SqPCR_Cq
8176.961306
templateDNA_16SqPCR_copies
human sputum metagenome
title
Azithromycin
trial_arm
Week 0
visit
yes
visit012
yes
visit018
yes
visit1218
2017-09-20T00:00:00
visit_date
0
vllog
0
vload
56.2
weight
F04
well
1.7075424
zbmiuk
-0.032220945
zhauk
1.3764422
zwauk
no
zymo_DNA