MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2000-04-10T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246593
External Id
0.896059037
FEV1FVC
-0.183612412
FEV1FVCZ
2.43
FEV1_baseline
101.722586
FEVpcpred
2.711874962
FVC
0.198123256
FVCZ
102.6389904
FVCpcpred
19756
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:33Z
INSDC first public
2022-11-29T01:24:33Z
INSDC last update
public
INSDC status
48568
RawReads_ASVpipeline
SRS10548187
SRA accession
BSP0135
Submitter Id
no
adm
7.24
ageyart
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0135
barcode
806rcbc229
barcode_806R
NCBI
broker name
207
cd4
2017-08-07
collection_date
yes
cotrimoxazole
2007-07-09T00:00:00
dateart
2007-06-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
10.08
duryart
['NA', 'not applicable']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
0.13384104
fev1z
Zimbabwe: Harare
geo_loc_name
comparison group
group
Homo sapiens
host
17.3
host_age
22.639568
host_body_mass_index
No HIV-associated chronic lung disease
host_disease
101.722586
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
C129
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
TTCCGTAGGGAT
index_sequence
sputum
isolation_source
17.82 S 31.04 E
lat_lon
yes
one_visit
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R1
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
11:49:00
sp05time
no
tbtreat
0.514402116
templateDNA_16SqPCR
18.36706393
templateDNA_16SqPCR_Cq
725220.96
templateDNA_16SqPCR_copies
human sputum metagenome
title
Week 0
visit
2017-08-07T00:00:00
visit_date
2590
vload
50.6
weight
E04
well
0.57916379
zbmiuk
-2.3166213
zhauk
-0.8813225
zwauk
no
zymo_DNA