MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2001-04-01T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246655
External Id
0.894094675
FEV1FVC
0.127558399
FEV1FVCZ
2.289999962
FEV1_baseline
77.856155
FEVpcpred
2.561249971
FVC
-1.856104018
FVCZ
76.97432839
FVCpcpred
11259
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:33Z
INSDC first public
2022-11-29T01:24:33Z
INSDC last update
public
INSDC status
52636
RawReads_ASVpipeline
SRS10548177
SRA accession
BSP0460
Submitter Id
no
acut_exac12m
Adherent
adherence
no
adm
12.79
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0460
barcode
806rcbc179
barcode_806R
NCBI
broker name
847
cd4
2018-07-18
collection_date
yes
cotrimoxazole
yes
cough_enrl
2014-01-15T00:00:00
dateart
2013-12-15T00:00:00
datehiv
3.58
duryart
2018-12-13T00:00:00
endfollowup
['NA', '2018-07-18T00:00:00']
endtreatdate
2017-08
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.673105117
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
17.2
host_age
18.129013
host_body_mass_index
HIV-associated chronic lung disease
host_disease
77.856155
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1105
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
AACCGCGGTCAA
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-12-13T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R1
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:02:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
0.008864092
templateDNA_16SqPCR
24.54602847
templateDNA_16SqPCR_Cq
12496.89
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 48
visit
yes
visit012
yes
visit018
yes
visit1218
2018-07-18T00:00:00
visit_date
7
visittotno
3.2380462
vllog
1730
vload
45.2
weight
D10
well
-1.2499149
zbmiuk
-2.595819
zhauk
-2.8102677
zwauk
no
zymo_DNA