MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1999-08-21T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249111
External Id
0.991751156
FEV1FVC
1.73597781
FEV1FVCZ
2.63
FEV1_baseline
106.7851359
FEVpcpred
2.651875019
FVC
-0.232885414
FVCZ
96.90398457
FVCpcpred
13550
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:44Z
INSDC first public
2022-11-29T01:24:44Z
INSDC last update
public
INSDC status
31117
RawReads_ASVpipeline
SRS10550531
SRA accession
BSP0179
Submitter Id
no
adm
9.65
ageyart
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0179
barcode
806rcbc234
barcode_806R
NCBI
broker name
288
cd4
2017-09-13
collection_date
yes
cotrimoxazole
2009-04-15T00:00:00
dateart
2008-06-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
8.41
duryart
['NA', 'not applicable']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
0.52897865
fev1z
Zimbabwe: Harare
geo_loc_name
comparison group
group
Homo sapiens
host
18
host_age
18.497545
host_body_mass_index
No HIV-associated chronic lung disease
host_disease
106.7851359
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
C143
host_subject_id
human respiratory
host_tissue_sampled
GTCATTCACGAG
index_sequence
sputum
isolation_source
17.82 S 31.04 E
lat_lon
yes
one_visit
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
13:25:00
sp05time
no
tbtreat
0.009240774
templateDNA_16SqPCR
23.93198398
templateDNA_16SqPCR_Cq
13027.94605
templateDNA_16SqPCR_copies
human sputum metagenome
title
Week 0
visit
2017-09-13T00:00:00
visit_date
1950
vload
42.4
weight
B05
well
-1.1771477
zbmiuk
-2.0147233
zhauk
-2.3603492
zwauk
no
zymo_DNA