MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1999-11-08T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249104
External Id
0.885708342
FEV1FVC
-0.300081009
FEV1FVCZ
2.63
FEV1_baseline
103.9101662
FEVpcpred
2.969374895
FVC
0.415429787
FVCZ
105.5547328
FVCpcpred
22721
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:44Z
INSDC first public
2022-11-29T01:24:44Z
INSDC last update
public
INSDC status
41718
RawReads_ASVpipeline
SRS10550523
SRA accession
BSP0105
Submitter Id
no
adm
8.79
ageyart
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0105
barcode
806rcbc381
barcode_806R
NCBI
broker name
279
cd4
2017-06-26
collection_date
yes
cotrimoxazole
2008-08-22T00:00:00
dateart
2004-06-15T00:00:00
datehiv
8.84
duryart
['NA', 'not applicable']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
0.30427104
fev1z
Zimbabwe: Harare
geo_loc_name
comparison group
group
Homo sapiens
host
17.6
host_age
22.238962
host_body_mass_index
No HIV-associated chronic lung disease
host_disease
103.9101662
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
C126
host_subject_id
human respiratory
host_tissue_sampled
TGTCTTGATAGC
index_sequence
sputum
isolation_source
17.82 S 31.04 E
lat_lon
yes
one_visit
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
12:30:00
sp05time
no
tbtreat
0.012294897
templateDNA_16SqPCR
23.69124297
templateDNA_16SqPCR_Cq
17333.74918
templateDNA_16SqPCR_copies
human sputum metagenome
title
Week 0
visit
2017-06-26T00:00:00
visit_date
35900
vload
52.4
weight
E11
well
0.41314328
zbmiuk
-1.6589388
zhauk
-0.65041977
zwauk
no
zymo_DNA