MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2001-06-19T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22250775
External Id
0.851651055
FEV1FVC
-0.479517254
FEV1FVCZ
2.160000086
FEV1_baseline
70.41490393
FEVpcpred
2.536250114
FVC
-2.197373138
FVCZ
72.7928986
FVCpcpred
16078
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:47Z
INSDC first public
2022-11-29T01:24:47Z
INSDC last update
public
INSDC status
29032
RawReads_ASVpipeline
SRS10620543
SRA accession
BSP0314
Submitter Id
P
WRrepeats
P
WRrepeats_WP
Abnormal HR
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
9.88
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
yes
attendschool
BSP0314
barcode
806rcbc46
barcode_806R
NCBI
broker name
2018-02-22
collection_date
yes
cotrimoxazole
no
cough_enrl
2011-05-05T00:00:00
dateart
2011-04-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
5.41
duryart
2018-02-22T00:00:00
endfollowup
['NA', '2017-09-01T00:00:00']
endtreatdate
2016-09
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-2.203161203
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
16.6
host_age
18.038994
host_body_mass_index
HIV-associated chronic lung disease
host_disease
70.41490393
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1017
host_subject_id
human respiratory
host_tissue_sampled
TCCGAATTCACA
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-02-22T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R3
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
11:02:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
0.137381117
templateDNA_16SqPCR
20.56654152
templateDNA_16SqPCR_Cq
193684.4015
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2018-02-22T00:00:00
visit_date
7
visittotno
47.4
weight
G05
well
-1.1274072
zbmiuk
-1.8019321
zhauk
-2.0370176
zwauk
no
zymo_DNA