MIGS/MIMS/MIMARKS.host-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2001-02-07T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248945
External Id
0.921549214
FEV1FVC
0.773898641
FEV1FVCZ
2.900000095
FEV1_baseline
82.9142566
FEVpcpred
3.146874905
FVC
-1.745806112
FVCZ
78.33122973
FVCpcpred
17913
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:39Z
INSDC first public
2022-11-29T01:24:39Z
INSDC last update
public
INSDC status
34883
RawReads_ASVpipeline
SRS10550334
SRA accession
BSP0454
Submitter Id
Not abnormal
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
5.33
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
no
attendschool
BSP0454
barcode
806rcbc72
barcode_806R
NCBI
broker name
1069
cd4
2018-07-11
collection_date
yes
cotrimoxazole
no
cough_enrl
2006-06-06T00:00:00
dateart
2004-09-16T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
11.18
duryart
2018-12-20T00:00:00
endfollowup
['NA', '2018-07-11T00:00:00']
endtreatdate
2017-08
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.298147655
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
17.4
host_age
18.988485
host_body_mass_index
HIV-associated chronic lung disease
host_disease
82.9142566
host_height
yes
host_hiv_stat
male
host_sex
B1104
host_subject_id
human respiratory
host_tissue_sampled
GAACTAGTCACC
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-12-20T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:02:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
0.135843626
templateDNA_16SqPCR
19.98234885
templateDNA_16SqPCR_Cq
191516.7957
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 48
visit
yes
visit012
yes
visit018
yes
visit1218
2018-07-11T00:00:00
visit_date
7
visittotno
2.668386
vllog
466
vload
55.2
weight
A09
well
-0.81331265
zbmiuk
-0.85597676
zhauk
-1.2595569
zwauk
no
zymo_DNA