MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2001-01-17T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246599
External Id
0.870048656
FEV1FVC
-0.537570518
FEV1FVCZ
3.13
FEV1_baseline
114.7429581
FEVpcpred
3.597500086
FVC
1.368064984
FVCZ
118.4007252
FVCpcpred
18812
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:33Z
INSDC first public
2022-11-29T01:24:33Z
INSDC last update
public
INSDC status
49398
RawReads_ASVpipeline
SRS10548179
SRA accession
BSP0155
Submitter Id
no
adm
4.87
ageyart
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0155
barcode
806rcbc31
barcode_806R
NCBI
broker name
1557
cd4
2017-08-30
collection_date
yes
cotrimoxazole
2005-11-30T00:00:00
dateart
2005-06-25T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
11.75
duryart
['NA', 'not applicable']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
1.1566737
fev1z
Zimbabwe: Harare
geo_loc_name
comparison group
group
Homo sapiens
host
16.6
host_age
18.844103
host_body_mass_index
No HIV-associated chronic lung disease
host_disease
114.7429581
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
C115
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
TAGCTCGTAACT
index_sequence
sputum
isolation_source
17.82 S 31.04 E
lat_lon
yes
one_visit
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R1
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
11:06:00
sp05time
yes
tbtreat
0.058159684
templateDNA_16SqPCR
21.71812749
templateDNA_16SqPCR_Cq
81995.43
templateDNA_16SqPCR_copies
human sputum metagenome
title
Week 0
visit
2017-08-30T00:00:00
visit_date
40
vload
48
weight
H03
well
-0.78167588
zbmiuk
-0.6360693
zhauk
-1.1787268
zwauk
no
zymo_DNA