MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2006-04-18T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249169
External Id
0.872231688
FEV1FVC
-0.244791404
FEV1FVCZ
1.6
FEV1_baseline
87.58831065
FEVpcpred
1.834375024
FVC
-0.876879771
FVCZ
89.15063326
FVCpcpred
18636
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:43Z
INSDC first public
2022-11-29T01:24:43Z
INSDC last update
public
INSDC status
40942
RawReads_ASVpipeline
SRS10550485
SRA accession
BYE11LT3
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Not Adherent
adherence
yes
all_3
no
antibiotic12m
0
any3_reasons
BYE11LT3
barcode
806rcbc67
barcode_806R
NCBI
broker name
2019-06-17
collection_date
['NA', 'missing']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-0.937652279
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
13.1
host_age
14.872406
host_body_mass_index
HIV-associated chronic lung disease
host_disease
87.58831065
host_height
yes
host_hiv_stat
B3067
host_subject_id
human respiratory
host_tissue_sampled
GCACGACAACAC
index_sequence
sputum
isolation_source
15.77 S 35.02 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['3', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:35:00
sp05time
0.028190024
templateDNA_16SqPCR
22.28529847
templateDNA_16SqPCR_Cq
39743.22014
templateDNA_16SqPCR_copies
human sputum metagenome
title
Azithromycin
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2019-06-17T00:00:00
visit_date
28.2
weight
D08
well
-2.0374274
zbmiuk
-2.299794
zhauk
-2.7505407
zwauk
no
zymo_DNA