MIGS/MIMS/MIMARKS.host-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2001-07-20T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248955
External Id
0.828006111
FEV1FVC
-0.956553881
FEV1FVCZ
2.039999962
FEV1_baseline
76.52494492
FEVpcpred
2.463749886
FVC
-1.416344074
FVCZ
82.40424889
FVCpcpred
15488
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:40Z
INSDC first public
2022-11-29T01:24:40Z
INSDC last update
public
INSDC status
28137
RawReads_ASVpipeline
SRS10550381
SRA accession
BSP0496
Submitter Id
Not abnormal
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
4.89
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
yes
attendschool
BSP0496
barcode
806rcbc121
barcode_806R
NCBI
broker name
726
cd4
2018-08-21
collection_date
yes
cotrimoxazole
no
cough_enrl
2006-06-09T00:00:00
dateart
2005-05-01T00:00:00
datehiv
11.28
duryart
2019-02-05T00:00:00
endfollowup
['NA', '2018-08-21T00:00:00']
endtreatdate
2017-09
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.766576952
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
17
host_age
17.625019
host_body_mass_index
HIV-associated chronic lung disease
host_disease
76.52494492
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1122
host_subject_id
human respiratory
host_tissue_sampled
GTACCTAATTGC
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-02-05T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['1.5', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:50:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.012310302
templateDNA_16SqPCR
23.59715113
templateDNA_16SqPCR_Cq
17355.46661
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 48
visit
yes
visit012
yes
visit018
yes
visit1218
2018-08-21T00:00:00
visit_date
7
visittotno
1.5910646
vllog
39
vload
40.4
weight
B03
well
-1.4917142
zbmiuk
-3.4364932
zhauk
-3.6247616
zwauk
no
zymo_DNA