T
BRrepeats
MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2009-08-06T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22250718
External Id
19489
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:46Z
INSDC first public
2022-11-29T01:24:46Z
INSDC last update
public
INSDC status
38806
RawReads_ASVpipeline
SRS10620495
SRA accession
BRrepeat_R2_BSP0680
Submitter Id
Adherent
adherence
no
adm
7.03
ageyart
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0680
barcode
806rcbc368
barcode_806R
NCBI
broker name
2019-05-30
collection_date
yes
cotrimoxazole
no
cough_enrl
2016-08-15T00:00:00
dateart
2016-08-09T00:00:00
datehiv
1.86
duryart
2019-05-30T00:00:00
endfollowup
['not applicable', '2019-05-29T00:00:00']
endtreatdate
2018-06
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
Zimbabwe: Harare
geo_loc_name
trial
group
Homo sapiens
host
9.8
host_age
HIV-associated chronic lung disease
host_disease
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1211
host_subject_id
human respiratory
host_tissue_sampled
CCTAAGCACATG
index_sequence
sputum
isolation_source
12 mths
lastvisit
2019-05-30T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
rs14antib
R3
run_processing_batch
stored in primestore
samp_mat_process
['not applicable', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
sequencing_control
sample_type
expectorated
sampling_induced_expectorated
BRrepeat
sequencing_control_details
yes
sequencing_controls
no
smoker
study ended
study_complt_stat
no
tbtreat
0.076365956
templateDNA_16SqPCR
21.16394131
templateDNA_16SqPCR_Cq
107663.2284
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 48
visit
5
visittotno
H09
well
no
zymo_DNA