MIGS/MIMS/MIMARKS.host-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2006-05-07T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248992
External Id
0.869913286
FEV1FVC
-0.084739237
FEV1FVCZ
1.629999995
FEV1_baseline
78.84464283
FEVpcpred
1.873749971
FVC
-1.691312573
FVCZ
79.14259295
FVCpcpred
10500
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:41Z
INSDC first public
2022-11-29T01:24:41Z
INSDC last update
public
INSDC status
34500
RawReads_ASVpipeline
SRS10550395
SRA accession
BSP0638
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
4.82
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0638
barcode
806rcbc228
barcode_806R
NCBI
broker name
2019-02-19
collection_date
yes
cotrimoxazole
no
cough_enrl
2011-03-03T00:00:00
dateart
2010-09-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
6.59
duryart
2019-02-19T00:00:00
endfollowup
['NA', '2018-09-04T00:00:00']
endtreatdate
2017-10
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-1.603833102
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
12.7
host_age
14.869273
host_body_mass_index
HIV-associated chronic lung disease
host_disease
78.84464283
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1133
host_subject_id
human respiratory
host_tissue_sampled
TACCTCTCAGAA
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-02-19T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
08:25:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.052134923
templateDNA_16SqPCR
21.38619703
templateDNA_16SqPCR_Cq
73501.52361
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2019-02-19T00:00:00
visit_date
7
visittotno
32
weight
D04
well
-1.8934588
zbmiuk
-0.85232359
zhauk
-1.6178648
zwauk
no
zymo_DNA