MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1998-02-25T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22108574
External Id
2.47
FEV1_baseline
74.5789171
FEVpcpred
10611
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:31Z
INSDC first public
2022-11-29T01:24:31Z
INSDC last update
public
INSDC status
30293
RawReads_ASVpipeline
SRS10483993
SRA accession
BSP0029
Submitter Id
C
WRrepeats
C
WRrepeats_BP
no
acut_exac12m
Adherent
adherence
no
adm
8.31
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
yes
attendschool
BSP0029
barcode
806rcbc62
barcode_806R
NCBI
broker name
133
cd4
2016-10-19
collection_date
no
cotrimoxazole
no
cough_enrl
2006-06-17T00:00:00
dateart
2006-06-05T00:00:00
datehiv
10.34
duryart
2018-03-07T00:00:00
endfollowup
['2017-09-20T00:00:00', '2017-09-20T00:00:00']
endtreatdate
2016-10
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.9498072
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
18.6
host_age
18.999199
host_body_mass_index
HIV-associated chronic lung disease
host_disease
74.5789171
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1028
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
GAATCTTCGAGC
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-03-07T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R1
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:13:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.275640865
templateDNA_16SqPCR
19.46095346
templateDNA_16SqPCR_Cq
388607.53
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 0
visit
yes
visit012
yes
visit018
yes
visit1218
2016-10-12T00:00:00
visit_date
7
visittotno
5.2121878
vllog
163000
vload
51.6
weight
G07
well
-1.1060326
zbmiuk
-1.7871091
zhauk
-2.2401984
zwauk
no
zymo_DNA