MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2005-05-25T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246736
External Id
0.875621895
FEV1FVC
-0.660750286
FEV1FVCZ
1.320000052
FEV1_baseline
68.64440557
FEVpcpred
1.507500052
FVC
-2.217402541
FVCZ
71.80922365
FVCpcpred
9971
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:32Z
INSDC first public
2022-11-29T01:24:32Z
INSDC last update
public
INSDC status
34869
RawReads_ASVpipeline
SRS10548143
SRA accession
BSP0745
Submitter Id
no
acut_exac12m
Adherent
adherence
no
adm
6.52
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0745
barcode
806rcbc286
barcode_806R
NCBI
broker name
2019-08-26
collection_date
yes
cotrimoxazole
no
cough_enrl
2011-12-03T00:00:00
dateart
2011-11-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
6.35
duryart
2019-08-26T00:00:00
endfollowup
['NA', '2019-03-11T00:00:00']
endtreatdate
2018-04
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-2.368066193
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
14.2
host_age
14.639076
host_body_mass_index
HIV-associated chronic lung disease
host_disease
68.64440557
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B1203
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
TGTGCTGTGTAG
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-08-26T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R1
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:30:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
0.800356558
templateDNA_16SqPCR
17.70643038
templateDNA_16SqPCR_Cq
1128368.91
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2019-08-26T00:00:00
visit_date
7
visittotno
28
weight
F11
well
-2.7068391
zbmiuk
-3.4313612
zhauk
-4.1690059
zwauk
no
zymo_DNA