MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1998-03-09T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246651
External Id
0.816380408
FEV1FVC
-0.772896536
FEV1FVCZ
3.089999914
FEV1_baseline
83.47664423
FEVpcpred
3.785000086
FVC
-0.961066233
FVCZ
88.00999856
FVCpcpred
14703
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:32Z
INSDC first public
2022-11-29T01:24:32Z
INSDC last update
public
INSDC status
44099
RawReads_ASVpipeline
SRS10548142
SRA accession
BSP0452
Submitter Id
no
acut_exac12m
Adherent
adherence
no
adm
9
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
no
attendschool
BSP0452
barcode
806rcbc26
barcode_806R
NCBI
broker name
286
cd4
2018-07-10
collection_date
yes
cotrimoxazole
no
cough_enrl
2007-03-10T00:00:00
dateart
2007-03-07T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
10.41
duryart
2018-12-21T00:00:00
endfollowup
['NA', '2018-07-10T00:00:00']
endtreatdate
2017-08
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.292763777
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
20.3
host_age
21.313305
host_body_mass_index
HIV-associated chronic lung disease
host_disease
83.47664423
host_height
yes
host_hiv_stat
male
host_sex
B1103
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
ATGTGCACGACT
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-12-21T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R1
run_processing_batch
stored in primestore
samp_mat_process
['1.5', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:00:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.135130837
templateDNA_16SqPCR
20.49510213
templateDNA_16SqPCR_Cq
190511.88
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 48
visit
yes
visit012
yes
visit018
yes
visit1218
2018-07-10T00:00:00
visit_date
7
visittotno
1.6532125
vllog
45
vload
63.2
weight
C03
well
-0.33432648
zbmiuk
-0.74892998
zhauk
-0.79311824
zwauk
no
zymo_DNA