MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2000-05-06T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246616
External Id
0.772363281
FEV1FVC
-1.84632686
FEV1FVCZ
2.11
FEV1_baseline
76.46013181
FEVpcpred
2.7318749430000002
FVC
-0.870242968
FVCZ
88.5387281
FVCpcpred
4462
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:35Z
INSDC first public
2022-11-29T01:24:35Z
INSDC last update
public
INSDC status
15942
RawReads_ASVpipeline
SRS10548244
SRA accession
BSP0272
Submitter Id
no
acut_exac12m
Not Adherent
adherence
yes
adm
8.74
ageyart
no
all_3
no
antibiotic12m
0
any3_reasons
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
yes
attendschool
BSP0272
barcode
806rcbc206
barcode_806R
NCBI
broker name
418
cd4
2018-01-17
collection_date
yes
cotrimoxazole
no
cough_enrl
2009-02-01T00:00:00
dateart
2006-05-15T00:00:00
datehiv
43228
dow
COTRIMOXAZOLE
drug_usage
8.96
duryart
2018-05-08T00:00:00
endfollowup
['2018-02-28T00:00:00', '2018-02-28T00:00:00']
endtreatdate
2018-01
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.790702
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
17.6
host_age
20
host_body_mass_index
HIV-associated chronic lung disease
host_disease
76.46013181
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B1159
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
TTGCAGACAGGC
index_sequence
sputum
isolation_source
2 wks
lastvisit
2018-01-31T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
1
nadm
yes
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R1
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:21:00
sp05time
withdrawal
study_complt_stat
yes
tbtreat
0.1419
templateDNA_16SqPCR
20.42
templateDNA_16SqPCR_Cq
200055.27
templateDNA_16SqPCR_copies
human sputum metagenome
title
Refused
treatstopreason
Azithromycin
trial_arm
Week 0
visit
no
visit012
no
visit018
no
visit1218
2018-01-10T00:00:00
visit_date
1
visittotno
4.0170336
vllog
10400
vload
51.2
weight
F01
well
-0.43447414
zbmiuk
-0.58588612
zhauk
-0.82907385
zwauk
no
zymo_DNA