MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2006-04-18T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249130
External Id
0.742857134
FEV1FVC
-2.10700379
FEV1FVCZ
1.43
FEV1_baseline
91.34210802
FEVpcpred
1.924999952
FVC
0.688349508
FVCZ
108.5630048
FVCpcpred
17040
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:43Z
INSDC first public
2022-11-29T01:24:43Z
INSDC last update
public
INSDC status
33715
RawReads_ASVpipeline
SRS10550484
SRA accession
BYC121T3
Submitter Id
Not abnormal
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
no
acut_exac12m
Not Adherent
adherence
yes
all_3
no
antibiotic12m
0
any3_reasons
BYC121T3
barcode
806rcbc43
barcode_806R
NCBI
broker name
1636
cd4
2018-01-29
collection_date
['2018-12-31T00:00:00', 'missing']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
3
f24mrcscore
-0.67857116
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
11.7
host_age
13.389148
host_body_mass_index
HIV-associated chronic lung disease
host_disease
91.34210802
host_height
yes
host_hiv_stat
B3067
host_subject_id
human respiratory
host_tissue_sampled
AAGGAGCGCCTT
index_sequence
sputum
isolation_source
15.77 S 35.02 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:51:00
sp05time
0.005858122
templateDNA_16SqPCR
24.57907702
templateDNA_16SqPCR_Cq
8258.972481
templateDNA_16SqPCR_copies
human sputum metagenome
title
Azithromycin
trial_arm
Week 0
visit
yes
visit012
yes
visit018
yes
visit1218
2018-01-25T00:00:00
visit_date
4.5563025
vllog
36000
vload
23.4
weight
D05
well
-2.8559806
zbmiuk
-2.1230879
zhauk
-3.2889428
zwauk
no
zymo_DNA