MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1998-07-09T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246650
External Id
0.773130546
FEV1FVC
-1.353065984
FEV1FVCZ
3.049999952
FEV1_baseline
78.83121508
FEVpcpred
3.944999933
FVC
-1.002641276
FVCZ
87.49747159
FVCpcpred
18031
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:35Z
INSDC first public
2022-11-29T01:24:35Z
INSDC last update
public
INSDC status
59243
RawReads_ASVpipeline
SRS10548258
SRA accession
BSP0450
Submitter Id
no
acut_exac12m
Adherent
adherence
no
adm
16.18
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
no
attendschool
BSP0450
barcode
806rcbc364
barcode_806R
NCBI
broker name
535
cd4
2018-07-09
collection_date
yes
cotrimoxazole
no
cough_enrl
2014-09-12T00:00:00
dateart
2014-08-19T00:00:00
datehiv
2.9
duryart
2019-01-08T00:00:00
endfollowup
['NA', '2018-07-09T00:00:00']
endtreatdate
2017-08
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.647917592
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
20
host_age
18.572662
host_body_mass_index
HIV-associated chronic lung disease
host_disease
78.83121508
host_height
yes
host_hiv_stat
male
host_sex
B1102
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
TGACTTTGTGTG
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-01-08T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R1
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
12:03:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
0.008199947
templateDNA_16SqPCR
24.54363307
templateDNA_16SqPCR_Cq
11560.55
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 48
visit
yes
visit012
yes
visit018
yes
visit1218
2018-07-09T00:00:00
visit_date
7
visittotno
57.4
weight
D09
well
-1.6463777
zbmiuk
-0.22101969
zhauk
-1.5696565
zwauk
no
zymo_DNA