MIGS/MIMS/MIMARKS.host-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2007-11-10T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248964
External Id
0.922325344
FEV1FVC
0.765231626
FEV1FVCZ
1.179999948
FEV1_baseline
79.2218862
FEVpcpred
1.279374957
FVC
-1.967877965
FVCZ
75.63574039
FVCpcpred
28481
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:41Z
INSDC first public
2022-11-29T01:24:41Z
INSDC last update
public
INSDC status
43324
RawReads_ASVpipeline
SRS10550405
SRA accession
BSP0532
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
8.86
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
yes
attendschool
BSP0532
barcode
806rcbc289
barcode_806R
NCBI
broker name
665
cd4
2018-09-25
collection_date
yes
cotrimoxazole
no
cough_enrl
2016-09-20T00:00:00
dateart
2016-09-05T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
1.09
duryart
2019-03-12T00:00:00
endfollowup
['NA', '2018-09-25T00:00:00']
endtreatdate
2017-10
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.646235758
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
10.8
host_age
15.266273
host_body_mass_index
HIV-associated chronic lung disease
host_disease
79.2218862
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1142
host_subject_id
human respiratory
host_tissue_sampled
GAGAGAATGATC
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-03-12T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:30:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
1.989999826
templateDNA_16SqPCR
16.03066927
templateDNA_16SqPCR_Cq
2805566.979
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 48
visit
yes
visit012
yes
visit018
yes
visit1218
2018-09-25T00:00:00
visit_date
7
visittotno
0
vllog
0
vload
25.8
weight
A12
well
-0.9520703
zbmiuk
-1.9394493
zhauk
-1.9224319
zwauk
no
zymo_DNA