MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2007-01-07T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246915
External Id
0.776311084
FEV1FVC
-1.85265246
FEV1FVCZ
1.36
FEV1_baseline
76.77966982
FEVpcpred
1.751875043
FVC
-0.900971672
FVCZ
88.55711966
FVCpcpred
9148
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:37Z
INSDC first public
2022-11-29T01:24:37Z
INSDC last update
public
INSDC status
53356
RawReads_ASVpipeline
SRS10548913
SRA accession
BYC15FT3
Submitter Id
no
acut_exac12m
Not Adherent
adherence
no
adm
8.44
ageyart
no
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BYC15FT3
barcode
806rcbc323
barcode_806R
NCBI
broker name
600
cd4
2018-07-16
collection_date
no
cough_enrl
2015-06-15T00:00:00
dateart
2015-06-15T00:00:00
datehiv
3.09
duryart
2019-06-17T00:00:00
endfollowup
['2019-04-30T00:00:00', '2019-04-30T00:00:00']
endtreatdate
2018-07
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
0
f24mrcscore
-1.7682461
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
11.5
host_age
13.571428
host_body_mass_index
HIV-associated chronic lung disease
host_disease
76.77966982
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B3105
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
ATGAGTTGGAAG
index_sequence
sputum
isolation_source
12 mths
lastvisit
2019-06-17T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
yes
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R1
run_processing_batch
stored in primestore
samp_mat_process
['5', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
11:15:00
sp05time
study ended
study_complt_stat
no
tbtreat
0.007713519
templateDNA_16SqPCR
24.63369598
templateDNA_16SqPCR_Cq
10874.77
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 0
visit
no
visit012
no
visit018
no
visit1218
2018-06-23T00:00:00
visit_date
5
visittotno
0
vllog
0
vload
26.6
weight
C04
well
-2.537024
zbmiuk
-0.99697071
zhauk
-2.0761435
zwauk
no
zymo_DNA