MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1998-04-18T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248110
External Id
0.970175029
FEV1FVC
1.760104483
FEV1FVCZ
2.460000038
FEV1_baseline
67.08182991
FEVpcpred
2.535624981
FVC
-3.268009253
FVCZ
59.61011776
FVCpcpred
15815
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:51Z
INSDC first public
2022-11-29T01:24:51Z
INSDC last update
public
INSDC status
37979
RawReads_ASVpipeline
SRS10620703
SRA accession
BSP0386
Submitter Id
S
WRrepeats
S
WRrepeats_WP
Abnormal HR
abnhr
Not abnormal
abnrr
Abnormal Sat
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
12.39
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
no
attendschool
BSP0386
barcode
806rcbc335
barcode_806R
NCBI
broker name
2018-04-24
collection_date
no
cotrimoxazole
no
cough_enrl
2010-09-09T00:00:00
dateart
2010-09-05T00:00:00
datehiv
6.23
duryart
2018-04-24T00:00:00
endfollowup
['NA', '2017-11-03T00:00:00']
endtreatdate
2016-12
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-2.536952195
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
20
host_age
18.338305
host_body_mass_index
HIV-associated chronic lung disease
host_disease
67.08182991
host_height
yes
host_hiv_stat
male
host_sex
B1037
host_subject_id
human respiratory
host_tissue_sampled
ACATCCGCGAAG
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-04-24T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
08:50:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.051367082
templateDNA_16SqPCR
21.58861099
templateDNA_16SqPCR_Cq
72418.99615
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2018-04-24T00:00:00
visit_date
7
visittotno
54
weight
G05
well
-1.7902229
zbmiuk
-0.82440287
zhauk
-2.1196227
zwauk
no
zymo_DNA