MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1997-10-06T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249105
External Id
0.89940063
FEV1FVC
0.099747367
FEV1FVCZ
3.47
FEV1_baseline
130.1300211
FEVpcpred
3.858124971
FVC
2.085393472
FVCZ
128.6278918
FVCpcpred
13696
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:44Z
INSDC first public
2022-11-29T01:24:44Z
INSDC last update
public
INSDC status
27425
RawReads_ASVpipeline
SRS10550521
SRA accession
BSP0133
Submitter Id
no
adm
9.02
ageyart
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
yes
attendschool
BSP0133
barcode
806rcbc297
barcode_806R
NCBI
broker name
126
cd4
2017-08-04
collection_date
yes
cotrimoxazole
2006-10-13T00:00:00
dateart
2006-08-01T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
10.81
duryart
['NA', 'not applicable']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
2.3827538
fev1z
Zimbabwe: Harare
geo_loc_name
comparison group
group
Homo sapiens
host
19.8
host_age
25.072012
host_body_mass_index
No HIV-associated chronic lung disease
host_disease
130.1300211
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
C128
host_subject_id
human respiratory
host_tissue_sampled
TCCCAACTTCGC
index_sequence
sputum
isolation_source
17.82 S 31.04 E
lat_lon
yes
one_visit
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
11:12:00
sp05time
no
tbtreat
0.028615191
templateDNA_16SqPCR
22.35
templateDNA_16SqPCR_Cq
40342.63379
templateDNA_16SqPCR_copies
human sputum metagenome
title
Week 0
visit
2017-08-04T00:00:00
visit_date
64900
vload
61.8
weight
A01
well
1.0621063
zbmiuk
-1.0995522
zhauk
0.4313117
zwauk
no
zymo_DNA