AA
BRrepeats
MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2003-09-03T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22250721
External Id
20918
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:48Z
INSDC first public
2022-11-29T01:24:48Z
INSDC last update
public
INSDC status
37138
RawReads_ASVpipeline
SRS10620568
SRA accession
BRrepeat_R2_BYD14HT2
Submitter Id
Adherent
adherence
no
adm
10.78
ageyart
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BYD14HT2
barcode
806rcbc342
barcode_806R
NCBI
broker name
2019-02-25
collection_date
yes
cotrimoxazole
no
cough_enrl
2014-06-15T00:00:00
dateart
2014-06-15T00:00:00
datehiv
3.7
duryart
2019-05-20T00:00:00
endfollowup
['not applicable', '2019-02-25T00:00:00']
endtreatdate
2018-02
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
Malawi: Blantyre
geo_loc_name
trial
group
Homo sapiens
host
15.4
host_age
HIV-associated chronic lung disease
host_disease
yes
host_hiv_stat
student
host_occupation
male
host_sex
B3083
host_subject_id
human respiratory
host_tissue_sampled
CGGACGTTCATA
index_sequence
sputum
isolation_source
15 mths
lastvisit
2019-05-20T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
rs14antib
R3
run_processing_batch
stored in primestore
samp_mat_process
['not applicable', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
sequencing_control
sample_type
expectorated
sampling_induced_expectorated
BRrepeat
sequencing_control_details
yes
sequencing_controls
no
smoker
study ended
study_complt_stat
no
tbtreat
0.052465607
templateDNA_16SqPCR
21.71426087
templateDNA_16SqPCR_Cq
73967.73249
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 48
visit
6
visittotno
F06
well
no
zymo_DNA