MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2003-12-11T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22250773
External Id
0.947247619
FEV1FVC
0.760789556
FEV1FVCZ
2.323124886
FEV1_baseline
104.9744394
FEVpcpred
2.452500105
FVC
0.037577304
FVCZ
100.4910371
FVCpcpred
19698
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:47Z
INSDC first public
2022-11-29T01:24:47Z
INSDC last update
public
INSDC status
35351
RawReads_ASVpipeline
SRS10620534
SRA accession
BSP0292
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
2.93
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0292
barcode
806rcbc181
barcode_806R
NCBI
broker name
2018-02-02
collection_date
yes
cotrimoxazole
no
cough_enrl
2006-11-15T00:00:00
dateart
2006-09-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
9.84
duryart
2018-02-02T00:00:00
endfollowup
['NA', '2017-08-18T00:00:00']
endtreatdate
2016-09
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
0.387426564
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
14.1
host_age
17.987581
host_body_mass_index
HIV-associated chronic lung disease
host_disease
104.9744394
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B1013
host_subject_id
human respiratory
host_tissue_sampled
TCAAGCTCAAGC
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-02-02T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R3
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:38:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.079569204
templateDNA_16SqPCR
21.15618435
templateDNA_16SqPCR_Cq
112179.272
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2018-02-02T00:00:00
visit_date
7
visittotno
39.4
weight
F10
well
-0.65170616
zbmiuk
-1.8642467
zhauk
-1.6340793
zwauk
no
zymo_DNA