MIGS/MIMS/MIMARKS.host-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2004-08-02T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249010
External Id
0.878281627
FEV1FVC
-0.122649527
FEV1FVCZ
1.840000033
FEV1_baseline
74.55311552
FEVpcpred
2.095000029
FVC
-2.002496243
FVCZ
75.25168896
FVCpcpred
18496
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:41Z
INSDC first public
2022-11-29T01:24:41Z
INSDC last update
public
INSDC status
32888
RawReads_ASVpipeline
SRS10550422
SRA accession
BSP0692
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
9.38
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0692
barcode
806rcbc181
barcode_806R
NCBI
broker name
2019-06-18
collection_date
yes
cotrimoxazole
no
cough_enrl
2013-12-20T00:00:00
dateart
2013-12-02T00:00:00
datehiv
4.1
duryart
2019-06-18T00:00:00
endfollowup
['NA', '2019-01-10T00:00:00']
endtreatdate
2018-01
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-1.872052862
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
14.8
host_age
15.53601
host_body_mass_index
HIV-associated chronic lung disease
host_disease
74.55311552
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1160
host_subject_id
human respiratory
host_tissue_sampled
TCAAGCTCAAGC
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-06-18T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
11:05:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
0.52717715
templateDNA_16SqPCR
18.12402549
templateDNA_16SqPCR_Cq
743231.6242
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2019-06-18T00:00:00
visit_date
7
visittotno
4.2718415
vllog
18700
vload
35.8
weight
F10
well
-2.1853759
zbmiuk
-2.0079129
zhauk
-2.4785933
zwauk
no
zymo_DNA