MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1999-06-24T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248060
External Id
0.81202152
FEV1FVC
-1.298984067
FEV1FVCZ
1.79
FEV1_baseline
59.75086734
FEVpcpred
2.204375029
FVC
-2.688480398
FVCZ
65.44390908
FVCpcpred
20562
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:49Z
INSDC first public
2022-11-29T01:24:49Z
INSDC last update
public
INSDC status
44020
RawReads_ASVpipeline
SRS10620626
SRA accession
BSP0061
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Not Adherent
adherence
no
adm
15.73
ageyart
no
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0061
barcode
806rcbc34
barcode_806R
NCBI
broker name
964
cd4
2017-03-13
collection_date
yes
cotrimoxazole
no
cough_enrl
2015-03-16T00:00:00
dateart
2009-07-15T00:00:00
datehiv
43124
dow
1.99
duryart
2018-01-24T00:00:00
endfollowup
['NA', 'NA']
endtreatdate
2017-03
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-3.0121491
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
17.7
host_age
20.732742
host_body_mass_index
HIV-associated chronic lung disease
host_disease
59.75086734
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B1058
host_subject_id
human respiratory
host_tissue_sampled
CTGCTAACGCAA
index_sequence
sputum
isolation_source
6 mths
lastvisit
2017-08-28T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
yes
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:05:00
sp05time
withdrawal
study_complt_stat
yes
tbtreat
0.040376271
templateDNA_16SqPCR
21.75481885
templateDNA_16SqPCR_Cq
56923.79044
templateDNA_16SqPCR_copies
human sputum metagenome
title
Refused
treatstopreason
Azithromycin
trial_arm
Week 0
visit
no
visit012
no
visit018
no
visit1218
2017-03-08T00:00:00
visit_date
3
visittotno
2.9395192
vllog
870
vload
57.2
weight
C04
well
-0.14019397
zbmiuk
0.4221929
zhauk
-0.023240104
zwauk
no
zymo_DNA