MIGS/MIMS/MIMARKS.host-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2009-08-29T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248969
External Id
0.823790453
FEV1FVC
-1.015460702
FEV1FVCZ
1.159999967
FEV1_baseline
84.82127276
FEVpcpred
1.408125043
FVC
-0.701534491
FVCZ
91.07517541
FVCpcpred
12730
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:41Z
INSDC first public
2022-11-29T01:24:41Z
INSDC last update
public
INSDC status
27992
RawReads_ASVpipeline
SRS10550393
SRA accession
BSP0565
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Abnormal Sat
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
3.46
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0565
barcode
806rcbc196
barcode_806R
NCBI
broker name
2018-11-26
collection_date
yes
cotrimoxazole
no
cough_enrl
2013-02-12T00:00:00
dateart
2012-06-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
4.4
duryart
2018-11-26T00:00:00
endfollowup
['NA', '2018-06-08T00:00:00']
endtreatdate
2017-07
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.18426704
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
9.2
host_age
15.12803
host_body_mass_index
HIV-associated chronic lung disease
host_disease
84.82127276
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1092
host_subject_id
human respiratory
host_tissue_sampled
ATTCTGTGAGCG
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-11-26T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:14:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.467340241
templateDNA_16SqPCR
18.29956474
templateDNA_16SqPCR_Cq
658871.5888
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2018-11-26T00:00:00
visit_date
7
visittotno
24.4
weight
E12
well
-0.64218789
zbmiuk
-1.279916
zhauk
-1.2300661
zwauk
no
zymo_DNA