MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1999-06-03T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249181
External Id
0.989961039
FEV1FVC
1.753208623
FEV1FVCZ
3.02
FEV1_baseline
105.2651037
FEVpcpred
3.050625086
FVC
-0.474203206
FVCZ
94.08428768
FVCpcpred
22480
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:44Z
INSDC first public
2022-11-29T01:24:44Z
INSDC last update
public
INSDC status
41112
RawReads_ASVpipeline
SRS10550534
SRA accession
BYF106T3
Submitter Id
no
adm
12.61
ageyart
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BYF106T3
barcode
806rcbc135
barcode_806R
NCBI
broker name
385
cd4
2017-07-31
collection_date
yes
cotrimoxazole
2012-01-11T00:00:00
dateart
2011-01-10T00:00:00
datehiv
5.55
duryart
['NA', 'not applicable']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
0.4103252
fev1z
Malawi: Blantyre
geo_loc_name
comparison group
group
Homo sapiens
host
18.1
host_age
17.065557
host_body_mass_index
No HIV-associated chronic lung disease
host_disease
105.2651037
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
C307
host_subject_id
human respiratory
host_tissue_sampled
TGCAATGTTGCT
index_sequence
sputum
isolation_source
15.77 S 35.02 E
lat_lon
yes
one_visit
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['5', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
11:50:00
sp05time
no
tbtreat
0.106069389
templateDNA_16SqPCR
20.45983299
templateDNA_16SqPCR_Cq
149540.1008
templateDNA_16SqPCR_copies
human sputum metagenome
title
Week 0
visit
2017-07-22T00:00:00
visit_date
1790
vload
41
weight
H04
well
-2.1617994
zbmiuk
-3.1688893
zhauk
-4.2046046
zwauk
no
zymo_DNA