MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2003-01-04T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246709
External Id
0.867611179
FEV1FVC
-0.282982271
FEV1FVCZ
2.220000029
FEV1_baseline
77.84028389
FEVpcpred
2.558749914
FVC
-1.662002387
FVCZ
79.39026475
FVCpcpred
11760
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:35Z
INSDC first public
2022-11-29T01:24:35Z
INSDC last update
public
INSDC status
29211
RawReads_ASVpipeline
SRS10548237
SRA accession
BSP0667
Submitter Id
no
acut_exac12m
Adherent
adherence
no
adm
6.44
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0667
barcode
806rcbc292
barcode_806R
NCBI
broker name
2019-03-28
collection_date
no
cotrimoxazole
no
cough_enrl
2009-06-15T00:00:00
dateart
2005-05-15T00:00:00
datehiv
8.4
duryart
2019-03-28T00:00:00
endfollowup
['NA', '2018-10-16T00:00:00']
endtreatdate
2017-11
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.649593723
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
16.2
host_age
16.604893
host_body_mass_index
HIV-associated chronic lung disease
host_disease
77.84028389
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1151
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
AGGGACGATAAT
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-03-28T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
R1
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:10:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.224091641
templateDNA_16SqPCR
19.60889415
templateDNA_16SqPCR_Cq
315931.74
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2019-03-28T00:00:00
visit_date
7
visittotno
41.4
weight
D12
well
-1.8892347
zbmiuk
-2.1616969
zhauk
-2.6944966
zwauk
no
zymo_DNA