MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1999-10-08T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246669
External Id
0.921501702
FEV1FVC
0.295211781
FEV1FVCZ
1.35
FEV1_baseline
60.23087584
FEVpcpred
1.465000033
FVC
-3.32179854
FVCZ
58.99155867
FVCpcpred
5896
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:33Z
INSDC first public
2022-11-29T01:24:33Z
INSDC last update
public
INSDC status
32218
RawReads_ASVpipeline
SRS10548172
SRA accession
BSP0510
Submitter Id
no
acut_exac12m
Adherent
adherence
no
adm
11.07
ageyart
no
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
no
attendschool
BSP0510
barcode
806rcbc124
barcode_806R
NCBI
broker name
605
cd4
2018-08-29
collection_date
yes
cotrimoxazole
no
cough_enrl
2010-11-01T00:00:00
dateart
2010-09-03T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
7.82
duryart
2019-07-31T00:00:00
endfollowup
['2019-07-31T00:00:00', '2019-07-31T00:00:00']
endtreatdate
2018-08
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-3.0202076
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
18.8
host_age
19.008612
host_body_mass_index
HIV-associated chronic lung disease
host_disease
60.23087584
host_height
yes
host_hiv_stat
male
host_sex
B1236
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
ATACTTCGCAGG
index_sequence
sputum
isolation_source
12 mths
lastvisit
2019-07-31T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
yes
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R1
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:05:00
sp05time
study ended
study_complt_stat
no
tbtreat
0.049006799
templateDNA_16SqPCR
21.98010622
templateDNA_16SqPCR_Cq
69091.39
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 0
visit
yes
visit012
no
visit018
no
visit1218
2018-08-20T00:00:00
visit_date
5
visittotno
1.6334685
vllog
43
vload
36.2
weight
E03
well
-1.1566772
zbmiuk
-5.6292415
zhauk
-5.9097877
zwauk
no
zymo_DNA