MIGS/MIMS/MIMARKS.host-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2002-04-25T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248951
External Id
0.955076951
FEV1FVC
0.949832137
FEV1FVCZ
1.940000057
FEV1_baseline
75.9545027
FEVpcpred
2.03125
FVC
-2.196016765
FVCZ
71.75395957
FVCpcpred
15394
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:40Z
INSDC first public
2022-11-29T01:24:40Z
INSDC last update
public
INSDC status
31392
RawReads_ASVpipeline
SRS10550368
SRA accession
BSP0476
Submitter Id
Abnormal HR
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
2.61
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0476
barcode
806rcbc355
barcode_806R
NCBI
broker name
623
cd4
2018-08-07
collection_date
no
cotrimoxazole
no
cough_enrl
2004-12-02T00:00:00
dateart
2004-03-15T00:00:00
datehiv
12.76
duryart
2019-01-23T00:00:00
endfollowup
['NA', '2018-08-07T00:00:00']
endtreatdate
2017-09
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.82900239
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
16.2
host_age
18.314257
host_body_mass_index
HIV-associated chronic lung disease
host_disease
75.9545027
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B1110
host_subject_id
human respiratory
host_tissue_sampled
TCCATAACTAGC
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-01-23T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['1.5', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:00:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.073728007
templateDNA_16SqPCR
21.05717845
templateDNA_16SqPCR_Cq
103944.1607
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 48
visit
yes
visit012
yes
visit018
yes
visit1218
2018-08-07T00:00:00
visit_date
7
visittotno
0
vllog
0
vload
44
weight
C08
well
-0.97608393
zbmiuk
-1.3752373
zhauk
-1.7793388
zwauk
no
zymo_DNA