MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2010-11-26T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249102
External Id
0.942319436
FEV1FVC
0.358606162
FEV1FVCZ
0.97
FEV1_baseline
102.9428181
FEVpcpred
1.029374957
FVC
0.055450456
FVCZ
100.7701637
FVCpcpred
13120
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:44Z
INSDC first public
2022-11-29T01:24:44Z
INSDC last update
public
INSDC status
40776
RawReads_ASVpipeline
SRS10550513
SRA accession
BSP0077
Submitter Id
no
adm
1.17
ageyart
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0077
barcode
806rcbc88
barcode_806R
NCBI
broker name
1022
cd4
2017-05-10
collection_date
yes
cotrimoxazole
2012-01-26T00:00:00
dateart
2011-08-01T00:00:00
datehiv
5.29
duryart
['NA', 'not applicable']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
0.2165311
fev1z
Zimbabwe: Harare
geo_loc_name
comparison group
group
Homo sapiens
host
6.4
host_age
14.932525
host_body_mass_index
No HIV-associated chronic lung disease
host_disease
102.9428181
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
C102
host_subject_id
human respiratory
host_tissue_sampled
CACGGTTGTGAG
index_sequence
sputum
isolation_source
17.82 S 31.04 E
lat_lon
yes
one_visit
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
12:30:00
sp05time
no
tbtreat
0.083563517
templateDNA_16SqPCR
20.69442596
templateDNA_16SqPCR_Cq
117810.5854
templateDNA_16SqPCR_copies
human sputum metagenome
title
Week 0
visit
2017-05-10T00:00:00
visit_date
552
vload
18.2
weight
A11
well
-0.39955398
zbmiuk
-1.5254898
zhauk
-1.2253844
zwauk
no
zymo_DNA