MIGS/MIMS/MIMARKS.host-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1998-12-14T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249008
External Id
0.903598681
FEV1FVC
0.317255896
FEV1FVCZ
2.150000095
FEV1_baseline
75.89519456
FEVpcpred
2.379374981
FVC
-2.094812
FVCZ
73.97026022
FVCpcpred
14666
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:42Z
INSDC first public
2022-11-29T01:24:42Z
INSDC last update
public
INSDC status
34347
RawReads_ASVpipeline
SRS10550431
SRA accession
BSP0689
Submitter Id
Not abnormal
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
no
acut_exac12m
Not Adherent
adherence
no
adm
15.13
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0689
barcode
806rcbc330
barcode_806R
NCBI
broker name
2019-06-17
collection_date
no
cotrimoxazole
no
cough_enrl
2014-01-30T00:00:00
dateart
2014-01-15T00:00:00
datehiv
4
duryart
2019-06-17T00:00:00
endfollowup
['NA', '2018-12-20T00:00:00']
endtreatdate
2018-01
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.875016288
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
20.5
host_age
17.606571
host_body_mass_index
HIV-associated chronic lung disease
host_disease
75.89519456
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1165
host_subject_id
human respiratory
host_tissue_sampled
TACGTAGTTTCG
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-06-17T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:05:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.022815056
templateDNA_16SqPCR
22.78208517
templateDNA_16SqPCR_Cq
32165.41359
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2019-06-17T00:00:00
visit_date
7
visittotno
41
weight
B05
well
-2.36605
zbmiuk
-3.5733762
zhauk
-5.0378227
zwauk
no
zymo_DNA