MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2002-03-29T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22108599
External Id
0.798690672
FEV1FVC
-1.461198267
FEV1FVCZ
1.22
FEV1_baseline
56.90579455
FEVpcpred
1.527500033
FVC
-2.90612547
FVCZ
64.19194883
FVCpcpred
9901
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:29Z
INSDC first public
2022-11-29T01:24:29Z
INSDC last update
public
INSDC status
34306
RawReads_ASVpipeline
SRS10483923
SRA accession
BSP0104
Submitter Id
yes
acut_exac12m
Adherent
adherence
no
adm
8.63
ageyart
yes
all_3
no
antibiotic12m
1
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0104
barcode
806rcbc252
barcode_806R
NCBI
broker name
342
cd4
2017-06-23
collection_date
yes
cotrimoxazole
no
cough_enrl
2010-11-15T00:00:00
dateart
2010-09-05T00:00:00
datehiv
6.6
duryart
2018-11-09T00:00:00
endfollowup
['2018-05-29T00:00:00', '2018-05-29T00:00:00']
endtreatdate
2017-06
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-3.1298749
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
15.2
host_age
17.205196
host_body_mass_index
HIV-associated chronic lung disease
host_disease
56.90579455
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1087
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
TGAGGATGATAG
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-11-09T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R1
run_processing_batch
stored in primestore
samp_mat_process
['1.5', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:00:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
1.319797762
templateDNA_16SqPCR
16.95893161
templateDNA_16SqPCR_Cq
1860694.14
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 0
visit
yes
visit012
yes
visit018
yes
visit1218
2017-06-21T00:00:00
visit_date
7
visittotno
5.2624512
vllog
183000
vload
34.4
weight
D07
well
-1.1666681
zbmiuk
-3.5922568
zhauk
-3.0388582
zwauk
no
zymo_DNA