MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2000-12-15T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249115
External Id
0.91051254
FEV1FVC
0.076208243
FEV1FVCZ
2.62
FEV1_baseline
107.8914943
FEVpcpred
2.8775000569999998
FVC
0.527215164
FVCZ
107.0462968
FVCpcpred
15240
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:44Z
INSDC first public
2022-11-29T01:24:44Z
INSDC last update
public
INSDC status
35989
RawReads_ASVpipeline
SRS10550527
SRA accession
BSP0344
Submitter Id
no
adm
8.5
ageyart
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0344
barcode
806rcbc236
barcode_806R
NCBI
broker name
439
cd4
2018-03-13
collection_date
yes
cotrimoxazole
2009-06-15T00:00:00
dateart
2009-06-01T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
8.74
duryart
['NA', 'not applicable']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
0.61600614
fev1z
Zimbabwe: Harare
geo_loc_name
comparison group
group
Homo sapiens
host
17.2
host_age
23.953688
host_body_mass_index
No HIV-associated chronic lung disease
host_disease
107.8914943
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
C135
host_subject_id
human respiratory
host_tissue_sampled
AGATAGGACAGG
index_sequence
sputum
isolation_source
17.82 S 31.04 E
lat_lon
yes
one_visit
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:30:00
sp05time
no
tbtreat
0.334730142
templateDNA_16SqPCR
18.65176576
templateDNA_16SqPCR_Cq
471913.5259
templateDNA_16SqPCR_copies
human sputum metagenome
title
Week 0
visit
2018-03-13T00:00:00
visit_date
2720
vload
54.4
weight
D05
well
0.9809984
zbmiuk
-2.1183803
zhauk
-0.33883032
zwauk
no
zymo_DNA