MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2002-08-22T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246901
External Id
0.790503668
FEV1FVC
-1.645901174
FEV1FVCZ
1.54
FEV1_baseline
80.27352043
FEVpcpred
1.948125005
FVC
-0.620045062
FVCZ
92.29509151
FVCpcpred
13370
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:36Z
INSDC first public
2022-11-29T01:24:36Z
INSDC last update
public
INSDC status
41928
RawReads_ASVpipeline
SRS10548877
SRA accession
BYC11NT3
Submitter Id
no
acut_exac12m
Not Adherent
adherence
no
adm
4.81
ageyart
no
all_3
no
antibiotic12m
0
any3_reasons
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
yes
attendschool
BYC11NT3
barcode
806rcbc297
barcode_806R
NCBI
broker name
1086
cd4
2017-10-18
collection_date
yes
cotrimoxazole
no
cough_enrl
2007-06-15T00:00:00
dateart
2007-06-15T00:00:00
datehiv
10.34
duryart
2018-09-19T00:00:00
endfollowup
['2018-09-19T00:00:00', '2018-09-19T00:00:00']
endtreatdate
2017-10
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-1.4576075
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
15.1
host_age
14.925167
host_body_mass_index
HIV-associated chronic lung disease
host_disease
80.27352043
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B3055
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
TCCCAACTTCGC
index_sequence
sputum
isolation_source
12 mths
lastvisit
2018-09-19T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
no
one_visit
yes
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R1
run_processing_batch
stored in primestore
samp_mat_process
['5', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:00:00
sp05time
study ended
study_complt_stat
no
tbtreat
0.01681
templateDNA_16SqPCR
23.58
templateDNA_16SqPCR_Cq
23699.29
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 0
visit
yes
visit012
no
visit018
no
visit1218
2017-10-12T00:00:00
visit_date
5
visittotno
1.5910646
vllog
39
vload
27
weight
A01
well
-2.8037903
zbmiuk
-4.3805285
zhauk
-4.5780368
zwauk
no
zymo_DNA