MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2005-05-22T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246920
External Id
0.800817153
FEV1FVC
-1.586286382
FEV1FVCZ
1.47
FEV1_baseline
70.30645359
FEVpcpred
1.835625052
FVC
-1.646541965
FVCZ
79.09295981
FVCpcpred
16326
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:38Z
INSDC first public
2022-11-29T01:24:38Z
INSDC last update
public
INSDC status
44950
RawReads_ASVpipeline
SRS10548926
SRA accession
BYD10FT3
Submitter Id
yes
acut_exac12m
Not Adherent
adherence
no
adm
7.45
ageyart
yes
all_3
no
antibiotic12m
1
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BYD10FT3
barcode
806rcbc170
barcode_806R
NCBI
broker name
899
cd4
2018-05-02
collection_date
yes
cotrimoxazole
yes
cough_enrl
2012-11-02T00:00:00
dateart
2012-08-04T00:00:00
datehiv
4.46
duryart
2018-10-29T00:00:00
endfollowup
['NA', 'NA']
endtreatdate
2017-04
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
3
f24mrcscore
-2.246299161
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
12.9
host_age
18.973576
host_body_mass_index
HIV-associated chronic lung disease
host_disease
70.30645359
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B3021
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
TACTAATCTGCG
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-10-29T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
0
nadm
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R1
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:15:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
1.907656979
templateDNA_16SqPCR
16.48546427
templateDNA_16SqPCR_Cq
2689477.33
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 48
visit
yes
visit012
yes
visit018
yes
visit1218
2018-05-02T00:00:00
visit_date
6
visittotno
0
vllog
0
vload
41
weight
C09
well
0.096785188
zbmiuk
-1.1506522
zhauk
-0.54491341
zwauk
no
zymo_DNA