MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2001-02-19T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246713
External Id
0.85221677
FEV1FVC
-0.846124326
FEV1FVCZ
1.730000019
FEV1_baseline
73.65905492
FEVpcpred
2.029999971
FVC
-1.68594564
FVCZ
77.97644377
FVCpcpred
13059
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:33Z
INSDC first public
2022-11-29T01:24:33Z
INSDC last update
public
INSDC status
36396
RawReads_ASVpipeline
SRS10548152
SRA accession
BSP0678
Submitter Id
no
acut_exac12m
Adherent
adherence
no
adm
15.32
ageyart
no
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0678
barcode
806rcbc266
barcode_806R
NCBI
broker name
382
cd4
2019-05-28
collection_date
yes
cotrimoxazole
no
cough_enrl
2016-06-15T00:00:00
dateart
2011-06-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
2.03
duryart
2019-05-28T00:00:00
endfollowup
['NA', '2019-05-28T00:00:00']
endtreatdate
2018-06
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.997840316
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
18.2
host_age
25.383492
host_body_mass_index
HIV-associated chronic lung disease
host_disease
73.65905492
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B1209
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
GATAGAAAGCCA
index_sequence
sputum
isolation_source
12 mths
lastvisit
2019-05-28T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
yes
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R1
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:40:00
sp05time
study ended
study_complt_stat
no
tbtreat
0.997380757
templateDNA_16SqPCR
17.37753447
templateDNA_16SqPCR_Cq
1406140.08
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 48
visit
yes
visit012
no
visit018
no
visit1218
2019-05-28T00:00:00
visit_date
5
visittotno
3.7923918
vllog
6200
vload
55.6
weight
B09
well
1.2631015
zbmiuk
-2.582072
zhauk
-0.26056141
zwauk
no
zymo_DNA