MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2007-07-07T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246939
External Id
0.816270256
FEV1FVC
-0.960438919
FEV1FVCZ
1.48
FEV1_baseline
84.13792645
FEVpcpred
1.813125014
FVC
-0.812826177
FVCZ
89.93239519
FVCpcpred
13831
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:37Z
INSDC first public
2022-11-29T01:24:37Z
INSDC last update
public
INSDC status
44888
RawReads_ASVpipeline
SRS10548895
SRA accession
BYD14FT3
Submitter Id
yes
acut_exac12m
Not Adherent
adherence
no
adm
7.33
ageyart
no
all_3
no
antibiotic12m
1
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BYD14FT3
barcode
806rcbc283
barcode_806R
NCBI
broker name
279
cd4
2019-02-11
collection_date
yes
cotrimoxazole
no
cough_enrl
2014-11-06T00:00:00
dateart
2014-11-06T00:00:00
datehiv
3.35
duryart
2019-05-06T00:00:00
endfollowup
['NA', '2019-02-11T00:00:00']
endtreatdate
2018-03
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
3
f24mrcscore
-1.243573354
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
11.6
host_age
14.699032
host_body_mass_index
HIV-associated chronic lung disease
host_disease
84.13792645
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B3082
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
CATCCAAATGCG
index_sequence
sputum
isolation_source
15 mths
lastvisit
2019-05-06T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
yes
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R1
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:04:00
sp05time
study ended
study_complt_stat
no
tbtreat
0.004578434
templateDNA_16SqPCR
25.42342601
templateDNA_16SqPCR_Cq
6454.83
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 48
visit
no
visit012
no
visit018
no
visit1218
2019-02-11T00:00:00
visit_date
6
visittotno
1.8573325
vllog
72
vload
28.4
weight
C11
well
-1.5997473
zbmiuk
-1.0410511
zhauk
-1.6393372
zwauk
no
zymo_DNA