MIGS/MIMS/MIMARKS.host-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1999-04-21T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248961
External Id
0.779720982
FEV1FVC
-1.409478758
FEV1FVCZ
2.480000019
FEV1_baseline
75.74176312
FEVpcpred
3.180624962
FVC
-1.227747972
FVCZ
84.71069826
FVCpcpred
19169
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:41Z
INSDC first public
2022-11-29T01:24:41Z
INSDC last update
public
INSDC status
36627
RawReads_ASVpipeline
SRS10550396
SRA accession
BSP0522
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
12.9
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0522
barcode
806rcbc92
barcode_806R
NCBI
broker name
511
cd4
2018-09-05
collection_date
yes
cotrimoxazole
no
cough_enrl
2012-03-15T00:00:00
dateart
2012-02-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
5.56
duryart
2019-02-20T00:00:00
endfollowup
['NA', '2018-09-05T00:00:00']
endtreatdate
2017-10
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.876008616
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
19.3
host_age
19.176346
host_body_mass_index
HIV-associated chronic lung disease
host_disease
75.74176312
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1135
host_subject_id
human respiratory
host_tissue_sampled
AGATGTTCTGCT
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-02-20T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:49:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.193858781
templateDNA_16SqPCR
19.46610462
templateDNA_16SqPCR_Cq
273308.4632
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 48
visit
yes
visit012
yes
visit018
yes
visit1218
2018-09-05T00:00:00
visit_date
7
visittotno
1.5910646
vllog
39
vload
51.2
weight
E11
well
-1.1729988
zbmiuk
-1.9929197
zhauk
-2.4918489
zwauk
no
zymo_DNA