MIGS/MIMS/MIMARKS.host-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1999-05-02T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248931
External Id
0.899531573
FEV1FVC
0.057239123
FEV1FVCZ
2.16
FEV1_baseline
78.79721141
FEVpcpred
2.401249886
FVC
-1.676174561
FVCZ
78.05952649
FVCpcpred
7725
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:42Z
INSDC first public
2022-11-29T01:24:42Z
INSDC last update
public
INSDC status
29410
RawReads_ASVpipeline
SRS10550451
SRA accession
BSP0304
Submitter Id
Not abnormal
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
no
acut_exac12m
Not Adherent
adherence
no
adm
13.71
ageyart
no
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
no
attendschool
BSP0304
barcode
806rcbc125
barcode_806R
NCBI
broker name
549
cd4
2018-02-14
collection_date
yes
cotrimoxazole
no
cough_enrl
2013-01-15T00:00:00
dateart
2008-06-15T00:00:00
datehiv
43318
dow
5.08
duryart
2018-08-06T00:00:00
endfollowup
['2018-05-09T00:00:00', '2018-05-09T00:00:00']
endtreatdate
2018-02
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.614944
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
18.7
host_age
21.886152
host_body_mass_index
HIV-associated chronic lung disease
host_disease
78.79721141
host_height
yes
host_hiv_stat
female
host_sex
B1178
host_subject_id
human respiratory
host_tissue_sampled
ATGTCGAGAGAA
index_sequence
sputum
isolation_source
6 mths
lastvisit
2018-08-06T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
yes
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
R2
run_processing_batch
stored in primestore
samp_mat_process
['NA', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
withdrawal
study_complt_stat
no
tbtreat
0.013770589
templateDNA_16SqPCR
23.4338617
templateDNA_16SqPCR_Cq
19414.22841
templateDNA_16SqPCR_copies
human sputum metagenome
title
Moved away
treatstopreason
Placebo
trial_arm
Week 0
visit
no
visit012
no
visit018
no
visit1218
2018-02-09T00:00:00
visit_date
3
visittotno
1.6720978
vllog
47
vload
55.4
weight
F03
well
0.16738585
zbmiuk
-0.74920988
zhauk
-0.31114873
zwauk
no
zymo_DNA