MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2002-11-26T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249145
External Id
0.864111539
FEV1FVC
-0.791820892
FEV1FVCZ
1.24
FEV1_baseline
56.47931482
FEVpcpred
1.434999943
FVC
-3.197839298
FVCZ
59.58982028
FVCpcpred
11080
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:44Z
INSDC first public
2022-11-29T01:24:44Z
INSDC last update
public
INSDC status
25415
RawReads_ASVpipeline
SRS10550525
SRA accession
BYD10XT3
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
12.78
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BYD10XT3
barcode
806rcbc227
barcode_806R
NCBI
broker name
571
cd4
2018-07-12
collection_date
yes
cotrimoxazole
no
cough_enrl
2015-09-07T00:00:00
dateart
2012-03-05T00:00:00
datehiv
1.92
duryart
2019-01-07T00:00:00
endfollowup
['NA', '2018-07-12T00:00:00']
endtreatdate
2017-08
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
3
f24mrcscore
-3.246696511
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
15.6
host_age
19.976219
host_body_mass_index
HIV-associated chronic lung disease
host_disease
56.47931482
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B3035
host_subject_id
human respiratory
host_tissue_sampled
AACCATCGGGTG
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-01-07T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:09:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.000946316
templateDNA_16SqPCR
27.28227915
templateDNA_16SqPCR_Cq
1334.147339
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 48
visit
yes
visit012
yes
visit018
yes
visit1218
2018-07-12T00:00:00
visit_date
7
visittotno
4.3304138
vllog
21400
vload
42
weight
C04
well
-0.11349219
zbmiuk
-2.9312699
zhauk
-1.9382186
zwauk
no
zymo_DNA