MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2005-06-11T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249155
External Id
0.633245357
FEV1FVC
-3.237113056
FEV1FVCZ
0.75
FEV1_baseline
42.00086648
FEVpcpred
1.184375048
FVC
-3.113963189
FVCZ
60.96798674
FVCpcpred
20330
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:43Z
INSDC first public
2022-11-29T01:24:43Z
INSDC last update
public
INSDC status
44149
RawReads_ASVpipeline
SRS10550477
SRA accession
BYD13XT3
Submitter Id
no
acut_exac12m
Not Adherent
adherence
no
adm
8.31
ageyart
yes
all_3
no
antibiotic12m
1
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BYD13XT3
barcode
806rcbc174
barcode_806R
NCBI
broker name
366
cd4
2018-11-12
collection_date
no
cotrimoxazole
no
cough_enrl
2013-10-01T00:00:00
dateart
2013-10-01T00:00:00
datehiv
4.18
duryart
2019-04-29T00:00:00
endfollowup
['NA', '2018-11-05T00:00:00']
endtreatdate
2017-12
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
-4.252744838
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
yes
hospitalised12m
Homo sapiens
host
13.4
host_age
16.707508
host_body_mass_index
HIV-associated chronic lung disease
host_disease
42.00086648
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B3060
host_subject_id
human respiratory
host_tissue_sampled
CGGACTACAACT
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-04-29T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
severe anaemia
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['3', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
08:30:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.049996837
templateDNA_16SqPCR
21.55548872
templateDNA_16SqPCR_Cq
70487.17904
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 48
visit
yes
visit012
yes
visit018
yes
visit1218
2018-11-05T00:00:00
visit_date
7
visittotno
3.4771214
vllog
3000
vload
30
weight
G09
well
-1.0958695
zbmiuk
-3.4238055
zhauk
-2.86695
zwauk
no
zymo_DNA