MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1997-08-02T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248054
External Id
0.661888152
FEV1FVC
-2.840819787
FEV1FVCZ
2.02
FEV1_baseline
70.09958704
FEVpcpred
3.051875114
FVC
-0.53097377
FVCZ
93.37113056
FVCpcpred
18126
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:51Z
INSDC first public
2022-11-29T01:24:51Z
INSDC last update
public
INSDC status
36051
RawReads_ASVpipeline
SRS10620710
SRA accession
BSP0050
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Not Adherent
adherence
no
adm
10.11
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
no
attendschool
BSP0050
barcode
806rcbc318
barcode_806R
NCBI
broker name
417
cd4
2017-01-26
collection_date
yes
cotrimoxazole
no
cough_enrl
2007-09-12T00:00:00
dateart
2007-08-31T00:00:00
datehiv
9.37
duryart
2018-06-14T00:00:00
endfollowup
['2018-01-26T00:00:00', '2018-01-26T00:00:00']
endtreatdate
2017-01
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-2.30321
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
19.4
host_age
17.57954
host_body_mass_index
HIV-associated chronic lung disease
host_disease
70.09958704
host_height
yes
host_hiv_stat
male
host_sex
B1047
host_subject_id
human respiratory
host_tissue_sampled
GCCGAGATTGGT
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-06-14T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:35:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.0100123
templateDNA_16SqPCR
23.99324881
templateDNA_16SqPCR_Cq
14115.66812
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 0
visit
yes
visit012
yes
visit018
yes
visit1218
2017-01-23T00:00:00
visit_date
7
visittotno
2.4377506
vllog
274
vload
41.8
weight
F03
well
-2.1527939
zbmiuk
-3.3117995
zhauk
-4.5469508
zwauk
no
zymo_DNA