MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2003-12-11T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22250726
External Id
0.903347707
FEV1FVC
0.002762736
FEV1FVCZ
1.53
FEV1_baseline
76.71170709
FEVpcpred
1.693699956
FVC
-1.851721743
FVCZ
76.58150945
FVCpcpred
22058
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:47Z
INSDC first public
2022-11-29T01:24:47Z
INSDC last update
public
INSDC status
41698
RawReads_ASVpipeline
SRS10620528
SRA accession
BSP0013
Submitter Id
Not abnormal
abnhr
Abnormal RR
abnrr
Abnormal Sat
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
2.93
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0013
barcode
806rcbc165
barcode_806R
NCBI
broker name
824
cd4
2016-09-16
collection_date
yes
cotrimoxazole
no
cough_enrl
2006-11-15T00:00:00
dateart
2006-09-15T00:00:00
datehiv
9.84
duryart
2018-02-02T00:00:00
endfollowup
['2017-08-18T00:00:00', '2017-08-18T00:00:00']
endtreatdate
2016-09
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.7723985
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
12.7
host_age
18.948101
host_body_mass_index
HIV-associated chronic lung disease
host_disease
76.71170709
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B1013
host_subject_id
human respiratory
host_tissue_sampled
TGGCATACGGCA
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-02-02T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R3
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:30:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.098233938
templateDNA_16SqPCR
20.85363736
templateDNA_16SqPCR_Cq
138493.4258
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 0
visit
yes
visit012
yes
visit018
yes
visit1218
2016-09-09T00:00:00
visit_date
7
visittotno
2.2922561
vllog
196
vload
39.4
weight
F08
well
0.1333475
zbmiuk
-1.4067417
zhauk
-0.64832515
zwauk
no
zymo_DNA