MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2002-02-18T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22108617
External Id
0.851976942
FEV1FVC
-0.376697973
FEV1FVCZ
2.680000067
FEV1_baseline
82.21280308
FEVpcpred
3.145625114
FVC
-1.268034941
FVCZ
84.25966035
FVCpcpred
16144
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:28Z
INSDC first public
2022-11-29T01:24:28Z
INSDC last update
public
INSDC status
52222
RawReads_ASVpipeline
SRS10483879
SRA accession
BSP0267
Submitter Id
no
acut_exac12m
Not Adherent
adherence
no
adm
10.49
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0267
barcode
806rcbc155
barcode_806R
NCBI
broker name
646
cd4
2018-01-15
collection_date
yes
cotrimoxazole
no
cough_enrl
2012-08-15T00:00:00
dateart
2003-04-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
4.46
duryart
2018-06-18T00:00:00
endfollowup
['NA', '2017-03-20T00:00:00']
endtreatdate
2017-01
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.323350315
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
15.9
host_age
18.082064
host_body_mass_index
HIV-associated chronic lung disease
host_disease
82.21280308
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1049
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
AACGAGAACTGA
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-06-18T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R1
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
08:27:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
0.034083755
templateDNA_16SqPCR
22.52502507
templateDNA_16SqPCR_Cq
48052.4
templateDNA_16SqPCR_copies
human sputum metagenome
title
By Physician
treatstopreason
Azithromycin
trial_arm
Week 48
visit
yes
visit012
yes
visit018
yes
visit1218
2018-01-15T00:00:00
visit_date
7
visittotno
1.9493901
vllog
89
vload
51.4
weight
D07
well
-0.87410456
zbmiuk
-0.58284855
zhauk
-0.97892314
zwauk
no
zymo_DNA