MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1999-12-26T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249185
External Id
0.842105288
FEV1FVC
-0.662847117
FEV1FVCZ
2.95
FEV1_baseline
100.8062847
FEVpcpred
3.503124952
FVC
0.451081991
FVCZ
105.6456664
FVCpcpred
18483
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:44Z
INSDC first public
2022-11-29T01:24:44Z
INSDC last update
public
INSDC status
36145
RawReads_ASVpipeline
SRS10550543
SRA accession
BYF10NT3
Submitter Id
no
adm
17.47
ageyart
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BYF10NT3
barcode
806rcbc6
barcode_806R
NCBI
broker name
313
cd4
2018-07-02
collection_date
yes
cotrimoxazole
2017-06-15T00:00:00
dateart
2017-06-15T00:00:00
datehiv
1.05
duryart
['NA', 'not applicable']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
0.062961198
fev1z
Malawi: Blantyre
geo_loc_name
comparison group
group
Homo sapiens
host
18.5
host_age
20.545694
host_body_mass_index
No HIV-associated chronic lung disease
host_disease
100.8062847
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
C324
host_subject_id
human respiratory
host_tissue_sampled
AGGCTACACGAC
index_sequence
sputum
isolation_source
15.77 S 35.02 E
lat_lon
yes
one_visit
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
11:15:00
sp05time
no
tbtreat
0.01419098
templateDNA_16SqPCR
23.48033474
templateDNA_16SqPCR_Cq
20006.90921
templateDNA_16SqPCR_copies
human sputum metagenome
title
Week 0
visit
2018-06-30T00:00:00
visit_date
1860
vload
50
weight
G12
well
-0.32254788
zbmiuk
-3.0460966
zhauk
-2.4817185
zwauk
no
zymo_DNA