MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2002-02-28T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246949
External Id
0.749721097
FEV1FVC
-2.050706295
FEV1FVCZ
1.26
FEV1_baseline
53.2791748
FEVpcpred
1.680624962
FVC
-2.922674147
FVCZ
63.93562999
FVCpcpred
14387
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:36Z
INSDC first public
2022-11-29T01:24:36Z
INSDC last update
public
INSDC status
37879
RawReads_ASVpipeline
SRS10548880
SRA accession
BYE10FT3
Submitter Id
no
acut_exac12m
Adherent
adherence
no
adm
9.27
ageyart
no
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BYE10FT3
barcode
806rcbc250
barcode_806R
NCBI
broker name
2018-06-11
collection_date
yes
cotrimoxazole
yes
cough_enrl
2011-06-07T00:00:00
dateart
2010-10-20T00:00:00
datehiv
5.56
duryart
2018-06-11T00:00:00
endfollowup
['NA', '2017-11-15T00:00:00']
endtreatdate
2016-12
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-3.411977424
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
16.2
host_age
16.361475
host_body_mass_index
HIV-associated chronic lung disease
host_disease
53.2791748
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B3007
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
TTAGGTGCAGCT
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-06-11T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
0
nadm
no
one_visit
yes
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R1
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:00:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.033035853
templateDNA_16SqPCR
22.4699998
templateDNA_16SqPCR_Cq
46575.03
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 72
visit
no
visit012
no
visit018
yes
visit1218
2018-06-11T00:00:00
visit_date
7
visittotno
34.4
weight
B07
well
-2.0803192
zbmiuk
-3.9160349
zhauk
-4.1639953
zwauk
no
zymo_DNA