MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2000-04-28T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22250772
External Id
0.876833639
FEV1FVC
-0.261882512
FEV1FVCZ
1.980000019
FEV1_baseline
75.71535953
FEVpcpred
2.258125067
FVC
-1.846756237
FVCZ
77.08074498
FVCpcpred
13238
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:47Z
INSDC first public
2022-11-29T01:24:47Z
INSDC last update
public
INSDC status
21565
RawReads_ASVpipeline
SRS10620527
SRA accession
BSP0286
Submitter Id
Not abnormal
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
9.38
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
yes
attendschool
BSP0286
barcode
806rcbc294
barcode_806R
NCBI
broker name
2018-01-30
collection_date
yes
cotrimoxazole
no
cough_enrl
2009-09-15T00:00:00
dateart
2009-08-21T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
7
duryart
2018-01-30T00:00:00
endfollowup
['NA', '2017-08-15T00:00:00']
endtreatdate
2016-09
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.843906331
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
17.7
host_age
15.563985
host_body_mass_index
HIV-associated chronic lung disease
host_disease
75.71535953
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1012
host_subject_id
human respiratory
host_tissue_sampled
GTTTCTAGAGCT
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-01-30T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R3
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:20:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
1.101266957
templateDNA_16SqPCR
17.22424705
templateDNA_16SqPCR_Cq
1552602.252
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2018-01-30T00:00:00
visit_date
7
visittotno
34.6
weight
F12
well
-3.2002461
zbmiuk
-3.9534707
zhauk
-5.6559834
zwauk
no
zymo_DNA