MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2001-03-23T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22108571
External Id
0.966048911
FEV1FVC
1.4501427
FEV1FVCZ
2.08
FEV1_baseline
76.22997518
FEVpcpred
2.153100014
FVC
-2.451176445
FVCZ
69.731654
FVCpcpred
17661
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:31Z
INSDC first public
2022-11-29T01:24:31Z
INSDC last update
public
INSDC status
46492
RawReads_ASVpipeline
SRS10483984
SRA accession
BSP0011
Submitter Id
no
acut_exac12m
Adherent
adherence
no
adm
7.23
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0011
barcode
806rcbc157
barcode_806R
NCBI
broker name
518
cd4
2016-09-09
collection_date
no
cotrimoxazole
no
cough_enrl
2008-06-15T00:00:00
dateart
2008-06-15T00:00:00
datehiv
8.24
duryart
2018-01-30T00:00:00
endfollowup
['2017-08-11T00:00:00', '2017-08-11T00:00:00']
endtreatdate
2016-09
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.7538322
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
15.4
host_age
20.609356
host_body_mass_index
HIV-associated chronic lung disease
host_disease
76.22997518
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1011
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
CCATGCGATAAC
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-01-30T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R1
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:55:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.257077476
templateDNA_16SqPCR
19.49301263
templateDNA_16SqPCR_Cq
362436.25
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 0
visit
yes
visit012
yes
visit018
yes
visit1218
2016-09-07T00:00:00
visit_date
7
visittotno
1.9542425
vllog
90
vload
50.8
weight
F07
well
0.40727264
zbmiuk
-1.8090644
zhauk
-0.77759981
zwauk
no
zymo_DNA