MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2000-09-27T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246966
External Id
0.874268989
FEV1FVC
-0.454126162
FEV1FVCZ
2.99
FEV1_baseline
111.2655288
FEVpcpred
3.420000076
FVC
1.050956922
FVCZ
114.1376683
FVCpcpred
8161
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:37Z
INSDC first public
2022-11-29T01:24:37Z
INSDC last update
public
INSDC status
32757
RawReads_ASVpipeline
SRS10548917
SRA accession
BYF10IT3
Submitter Id
no
adm
12.69
ageyart
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BYF10IT3
barcode
806rcbc251
barcode_806R
NCBI
broker name
388
cd4
2018-02-19
collection_date
2013-06-15T00:00:00
dateart
4.7
duryart
['NA', 'not applicable']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
0.88148147
fev1z
Malawi: Blantyre
geo_loc_name
comparison group
group
Homo sapiens
host
17.3
host_age
18.82711
host_body_mass_index
No HIV-associated chronic lung disease
host_disease
111.2655288
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
C318
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
CATCGGTCAAGG
index_sequence
sputum
isolation_source
15.77 S 35.02 E
lat_lon
yes
one_visit
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
rs14antib
R1
run_processing_batch
stored in primestore
samp_mat_process
['5', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
08:15:00
sp05time
no
tbtreat
0.641748625
templateDNA_16SqPCR
18.03650001
templateDNA_16SqPCR_Cq
904758.25
templateDNA_16SqPCR_copies
human sputum metagenome
title
Week 0
visit
2018-02-17T00:00:00
visit_date
59
vload
47
weight
C07
well
-0.91549796
zbmiuk
-0.91216838
zhauk
-1.4547364
zwauk
no
zymo_DNA