MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2002-04-29T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249109
External Id
0.931497744
FEV1FVC
0.916629413
FEV1FVCZ
3.51
FEV1_baseline
119.2214784
FEVpcpred
3.7681250569999998
FVC
0.983927295
FVCZ
112.293948
FVCpcpred
24527
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:44Z
INSDC first public
2022-11-29T01:24:44Z
INSDC last update
public
INSDC status
45325
RawReads_ASVpipeline
SRS10550516
SRA accession
BSP0169
Submitter Id
no
adm
13.94
ageyart
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0169
barcode
806rcbc178
barcode_806R
NCBI
broker name
779
cd4
2017-09-07
collection_date
yes
cotrimoxazole
2016-04-08T00:00:00
dateart
2016-04-05T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
1.42
duryart
['NA', 'not applicable']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
1.4552455
fev1z
Zimbabwe: Harare
geo_loc_name
comparison group
group
Homo sapiens
host
15.3
host_age
18.057299
host_body_mass_index
No HIV-associated chronic lung disease
host_disease
119.2214784
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
C107
host_subject_id
human respiratory
host_tissue_sampled
AGCAAACACCCG
index_sequence
sputum
isolation_source
17.82 S 31.04 E
lat_lon
yes
one_visit
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
11:40:00
sp05time
no
tbtreat
0.007601965
templateDNA_16SqPCR
24.29936115
templateDNA_16SqPCR_Cq
10717.49905
templateDNA_16SqPCR_copies
human sputum metagenome
title
Week 0
visit
2017-09-07T00:00:00
visit_date
0
vload
47.8
weight
C10
well
-0.72015673
zbmiuk
-1.0181988
zhauk
-1.0754048
zwauk
no
zymo_DNA