MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2008-12-01T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249184
External Id
0.879051401
FEV1FVC
-0.442291072
FEV1FVCZ
1.39
FEV1_baseline
103.754452
FEVpcpred
1.581249952
FVC
0.481870762
FVCZ
106.2396732
FVCpcpred
13523
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:44Z
INSDC first public
2022-11-29T01:24:44Z
INSDC last update
public
INSDC status
27763
RawReads_ASVpipeline
SRS10550537
SRA accession
BYF10MT3
Submitter Id
no
adm
7.62
ageyart
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BYF10MT3
barcode
806rcbc185
barcode_806R
NCBI
broker name
2018-06-04
collection_date
yes
cotrimoxazole
2016-07-15T00:00:00
dateart
2016-07-15T00:00:00
datehiv
1.93
duryart
['NA', 'not applicable']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
3
f24mrcscore
0.2909711
fev1z
Malawi: Blantyre
geo_loc_name
comparison group
group
Homo sapiens
host
9.5
host_age
17.360035
host_body_mass_index
No HIV-associated chronic lung disease
host_disease
103.754452
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
C322
host_subject_id
human respiratory
host_tissue_sampled
ATGGACCGAACC
index_sequence
sputum
isolation_source
15.77 S 35.02 E
lat_lon
yes
one_visit
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:50:00
sp05time
no
tbtreat
0.129727951
templateDNA_16SqPCR
20.16655728
templateDNA_16SqPCR_Cq
182894.7169
templateDNA_16SqPCR_copies
human sputum metagenome
title
Week 0
visit
2018-06-02T00:00:00
visit_date
39
vload
28
weight
B11
well
0.32233369
zbmiuk
-1.4518691
zhauk
-0.54179358
zwauk
no
zymo_DNA