MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2006-09-04T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249179
External Id
0.76265617
FEV1FVC
-1.805352868
FEV1FVCZ
1.45
FEV1_baseline
80.10192457
FEVpcpred
1.901250005
FVC
-0.618027618
FVCZ
92.35016606
FVCpcpred
20041
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:43Z
INSDC first public
2022-11-29T01:24:43Z
INSDC last update
public
INSDC status
40524
RawReads_ASVpipeline
SRS10550471
SRA accession
BYE139T3
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Not Adherent
adherence
no
adm
6.78
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
yes
attendschool
BYE139T3
barcode
806rcbc101
barcode_806R
NCBI
broker name
2019-02-21
collection_date
yes
cotrimoxazole
no
cough_enrl
2013-06-15T00:00:00
dateart
2013-06-15T00:00:00
datehiv
4.3
duryart
2019-02-21T00:00:00
endfollowup
['NA', '2018-11-12T00:00:00']
endtreatdate
2017-10
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
4
f24mrcscore
-1.522251703
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
12.4
host_age
17.907976
host_body_mass_index
HIV-associated chronic lung disease
host_disease
80.10192457
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B3050
host_subject_id
human respiratory
host_tissue_sampled
AACACAAGGAGT
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-02-21T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:06:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
0.00664188
templateDNA_16SqPCR
24.39653535
templateDNA_16SqPCR_Cq
9363.939451
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2019-02-21T00:00:00
visit_date
7
visittotno
34.6
weight
F12
well
0.096067406
zbmiuk
-1.6196911
zhauk
-0.88240457
zwauk
no
zymo_DNA