MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2005-05-03T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249132
External Id
0.73226543
FEV1FVC
-2.18663513
FEV1FVCZ
1.4
FEV1_baseline
72.95768204
FEVpcpred
1.91187501
FVC
-1.011227428
FVCZ
87.49933531
FVCpcpred
15359
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:43Z
INSDC first public
2022-11-29T01:24:43Z
INSDC last update
public
INSDC status
30590
RawReads_ASVpipeline
SRS10550489
SRA accession
BYC123T3
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
7.12
ageyart
no
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BYC123T3
barcode
806rcbc250
barcode_806R
NCBI
broker name
463
cd4
2018-02-05
collection_date
yes
cotrimoxazole
no
cough_enrl
2012-06-15T00:00:00
dateart
2012-06-15T00:00:00
datehiv
5.64
duryart
2019-03-25T00:00:00
endfollowup
['2019-01-07T00:00:00', '2019-01-07T00:00:00']
endtreatdate
2018-02
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-2.0453818
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
12.7
host_age
15.159665
host_body_mass_index
HIV-associated chronic lung disease
host_disease
72.95768204
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B3070
host_subject_id
human respiratory
host_tissue_sampled
TTAGGTGCAGCT
index_sequence
sputum
isolation_source
15 mths
lastvisit
2019-03-25T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
no
one_visit
yes
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:20:00
sp05time
study ended
study_complt_stat
no
tbtreat
0.002831309
templateDNA_16SqPCR
25.67119772
templateDNA_16SqPCR_Cq
3991.67224
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 0
visit
yes
visit012
no
visit018
no
visit1218
2018-01-27T00:00:00
visit_date
6
visittotno
1.5910646
vllog
39
vload
31
weight
B07
well
-1.6558434
zbmiuk
-1.3109577
zhauk
-1.8094251
zwauk
no
zymo_DNA