MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2000-10-12T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248047
External Id
2.22
FEV1_baseline
77.30047528
FEVpcpred
13450
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:50Z
INSDC first public
2022-11-29T01:24:50Z
INSDC last update
public
INSDC status
33950
RawReads_ASVpipeline
SRS10620663
SRA accession
BSP0032
Submitter Id
Not abnormal
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
8.7
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
yes
attendschool
BSP0032
barcode
806rcbc293
barcode_806R
NCBI
broker name
501
cd4
2016-10-24
collection_date
no
cotrimoxazole
no
cough_enrl
2009-06-23T00:00:00
dateart
2007-12-11T00:00:00
datehiv
7.34
duryart
2018-03-05T00:00:00
endfollowup
['2017-10-02T00:00:00', '2017-10-02T00:00:00']
endtreatdate
2016-10
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.684508
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
16
host_age
16.534157
host_body_mass_index
HIV-associated chronic lung disease
host_disease
77.30047528
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1030
host_subject_id
human respiratory
host_tissue_sampled
ATAGCGGTCTGG
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-03-05T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:22:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
0.024170631
templateDNA_16SqPCR
22.5169872
templateDNA_16SqPCR_Cq
34076.5479
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 0
visit
yes
visit012
yes
visit018
yes
visit1218
2016-10-10T00:00:00
visit_date
7
visittotno
2.2695129
vllog
186
vload
41.8
weight
E12
well
-1.8729873
zbmiuk
-1.9093564
zhauk
-2.4560237
zwauk
no
zymo_DNA