MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2001-12-23T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248090
External Id
0.770416052
FEV1FVC
-1.971107866
FEV1FVCZ
1.25
FEV1_baseline
51.16206129
FEVpcpred
1.622499943
FVC
-3.147400699
FVCZ
60.10945518
FVCpcpred
17866
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:49Z
INSDC first public
2022-11-29T01:24:49Z
INSDC last update
public
INSDC status
39447
RawReads_ASVpipeline
SRS10620641
SRA accession
BSP0266
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
7.74
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
yes
attendschool
BSP0266
barcode
806rcbc310
barcode_806R
NCBI
broker name
2018-01-15
collection_date
no
cotrimoxazole
no
cough_enrl
2009-09-18T00:00:00
dateart
2009-08-15T00:00:00
datehiv
6.95
duryart
2018-01-15T00:00:00
endfollowup
['NA', '2017-07-31T00:00:00']
endtreatdate
2016-08
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-3.621938996
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
16
host_age
16.101109
host_body_mass_index
HIV-associated chronic lung disease
host_disease
51.16206129
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B1009
host_subject_id
human respiratory
host_tissue_sampled
TCTTAACGACTG
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-01-15T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:40:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
0.00172895
templateDNA_16SqPCR
26.41
templateDNA_16SqPCR_Cq
2437.530382
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2018-01-15T00:00:00
visit_date
7
visittotno
37.2
weight
F02
well
-2.1864524
zbmiuk
-1.8493533
zhauk
-3.0747297
zwauk
no
zymo_DNA