MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2002-08-15T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249157
External Id
0.806306279
FEV1FVC
-1.230695009
FEV1FVCZ
1.79
FEV1_baseline
65.96722269
FEVpcpred
2.220000029
FVC
-2.201185881
FVCZ
72.7547318
FVCpcpred
20264
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:43Z
INSDC first public
2022-11-29T01:24:43Z
INSDC last update
public
INSDC status
36469
RawReads_ASVpipeline
SRS10550481
SRA accession
BYD140T3
Submitter Id
Not abnormal
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
12.83
ageyart
no
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BYD140T3
barcode
806rcbc213
barcode_806R
NCBI
broker name
594
cd4
2019-01-07
collection_date
yes
cotrimoxazole
no
cough_enrl
2015-06-15T00:00:00
dateart
2015-06-15T00:00:00
datehiv
2.63
duryart
2019-01-07T00:00:00
endfollowup
['NA', '2018-12-31T00:00:00']
endtreatdate
2018-01
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-2.516015344
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
16.3
host_age
19.311857
host_body_mass_index
HIV-associated chronic lung disease
host_disease
65.96722269
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B3066
host_subject_id
human respiratory
host_tissue_sampled
GATAGCTGTCTT
index_sequence
sputum
isolation_source
12 mths
lastvisit
2019-01-07T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
no
one_visit
yes
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:15:00
sp05time
study ended
study_complt_stat
no
tbtreat
0.006465141
templateDNA_16SqPCR
24.5
templateDNA_16SqPCR_Cq
9114.767381
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 48
visit
yes
visit012
no
visit018
no
visit1218
2019-01-07T00:00:00
visit_date
5
visittotno
0
vllog
0
vload
45.8
weight
E02
well
-0.38655406
zbmiuk
-2.7732184
zhauk
-2.0948968
zwauk
no
zymo_DNA