MIGS/MIMS/MIMARKS.host-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2004-03-24T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249038
External Id
0.877313232
FEV1FVC
-0.574230787
FEV1FVCZ
1.6
FEV1_baseline
77.28058745
FEVpcpred
1.823750019
FVC
-1.541327427
FVCZ
80.24044897
FVCpcpred
19764
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:40Z
INSDC first public
2022-11-29T01:24:40Z
INSDC last update
public
INSDC status
41309
RawReads_ASVpipeline
SRS10550356
SRA accession
BYD10LT3
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
2.58
ageyart
no
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BYD10LT3
barcode
806rcbc83
barcode_806R
NCBI
broker name
760
cd4
2018-05-21
collection_date
yes
cotrimoxazole
no
cough_enrl
2006-10-23T00:00:00
dateart
2006-10-20T00:00:00
datehiv
10.66
duryart
2018-11-05T00:00:00
endfollowup
['NA', '2018-05-21T00:00:00']
endtreatdate
2017-06
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-1.729755898
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
14.1
host_age
16.728621
host_body_mass_index
HIV-associated chronic lung disease
host_disease
77.28058745
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B3023
host_subject_id
human respiratory
host_tissue_sampled
CGAGAAGAGAAC
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-11-05T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
no
one_visit
yes
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:55:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.0481929
templateDNA_16SqPCR
21.49987567
templateDNA_16SqPCR_Cq
67943.93059
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 48
visit
no
visit012
no
visit018
yes
visit1218
2018-05-21T00:00:00
visit_date
7
visittotno
34.4
weight
D10
well
-1.3071219
zbmiuk
-2.5802789
zhauk
-2.5784054
zwauk
no
zymo_DNA