MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2000-04-10T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246591
External Id
0.974748362
FEV1FVC
1.624843643
FEV1FVCZ
3.45
FEV1_baseline
108.1815444
FEVpcpred
3.539375067
FVC
-0.206973798
FVCZ
97.41746377
FVCpcpred
15418
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:33Z
INSDC first public
2022-11-29T01:24:33Z
INSDC last update
public
INSDC status
40884
RawReads_ASVpipeline
SRS10548183
SRA accession
BSP0122
Submitter Id
no
adm
8.23
ageyart
no
artdrug1stline
no
artdrug2ndline
yes
attendschool
BSP0122
barcode
806rcbc381
barcode_806R
NCBI
broker name
502
cd4
2017-07-18
collection_date
yes
cotrimoxazole
2008-07-04T00:00:00
dateart
2007-10-08T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
9.04
duryart
['NA', 'not applicable']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
0.63076794
fev1z
Zimbabwe: Harare
geo_loc_name
comparison group
group
Homo sapiens
host
17.2
host_age
18.933718
host_body_mass_index
No HIV-associated chronic lung disease
host_disease
108.1815444
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
C127
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
TGTCTTGATAGC
index_sequence
sputum
isolation_source
17.82 S 31.04 E
lat_lon
yes
one_visit
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R1
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:25:00
sp05time
no
tbtreat
0.289415851
templateDNA_16SqPCR
19.29515922
templateDNA_16SqPCR_Cq
408027.95
templateDNA_16SqPCR_copies
human sputum metagenome
title
Week 0
visit
2017-07-18T00:00:00
visit_date
39
vload
50.8
weight
E11
well
-0.80323088
zbmiuk
-1.7612674
zhauk
-1.8417726
zwauk
no
zymo_DNA