MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2000-08-02T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248124
External Id
0.829721394
FEV1FVC
-1.107827908
FEV1FVCZ
2.00999999
FEV1_baseline
76.46416994
FEVpcpred
2.422499895
FVC
-1.330142844
FVCZ
82.55061218
FVCpcpred
18843
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:49Z
INSDC first public
2022-11-29T01:24:49Z
INSDC last update
public
INSDC status
42072
RawReads_ASVpipeline
SRS10620637
SRA accession
BSP0536
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
7.55
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
yes
attendschool
BSP0536
barcode
806rcbc170
barcode_806R
NCBI
broker name
2018-09-27
collection_date
yes
cotrimoxazole
no
cough_enrl
2008-02-20T00:00:00
dateart
2008-01-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
9.22
duryart
2018-09-27T00:00:00
endfollowup
['NA', '2018-04-11T00:00:00']
endtreatdate
2017-05
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.789853362
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
18.1
host_age
20.683533
host_body_mass_index
HIV-associated chronic lung disease
host_disease
76.46416994
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B1069
host_subject_id
human respiratory
host_tissue_sampled
TACTAATCTGCG
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-09-27T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['1.5', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:15:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.081160199
templateDNA_16SqPCR
20.8497422
templateDNA_16SqPCR_Cq
114422.3086
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2018-09-27T00:00:00
visit_date
7
visittotno
50.4
weight
C09
well
-0.21267223
zbmiuk
-1.2390927
zhauk
-0.98203635
zwauk
no
zymo_DNA