MIGS/MIMS/MIMARKS.host-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1999-08-17T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248999
External Id
0.825940358
FEV1FVC
-0.842640458
FEV1FVCZ
1.99000001
FEV1_baseline
66.40289016
FEVpcpred
2.409374952
FVC
-2.368972215
FVCZ
70.62198661
FVCpcpred
12992
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:39Z
INSDC first public
2022-11-29T01:24:39Z
INSDC last update
public
INSDC status
29639
RawReads_ASVpipeline
SRS10550322
SRA accession
BSP0655
Submitter Id
Not abnormal
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
11.33
ageyart
no
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0655
barcode
806rcbc261
barcode_806R
NCBI
broker name
229
cd4
2019-03-11
collection_date
yes
cotrimoxazole
no
cough_enrl
2010-12-15T00:00:00
dateart
2010-09-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
7.32
duryart
2019-06-03T00:00:00
endfollowup
['NA', '2019-03-11T00:00:00']
endtreatdate
2018-04
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-2.581098379
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
19.5
host_age
19.092024
host_body_mass_index
HIV-associated chronic lung disease
host_disease
66.40289016
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1202
host_subject_id
human respiratory
host_tissue_sampled
CTGTAGGAGACC
index_sequence
sputum
isolation_source
15 mths
lastvisit
2019-06-03T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
yes
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
08:45:00
sp05time
study ended
study_complt_stat
no
tbtreat
0.050289758
templateDNA_16SqPCR
21.4392218
templateDNA_16SqPCR_Cq
70900.14868
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 48
visit
yes
visit012
no
visit018
no
visit1218
2019-03-11T00:00:00
visit_date
6
visittotno
4.7347999
vllog
54300
vload
47
weight
E08
well
-1.2593961
zbmiuk
-2.9253302
zhauk
-3.3563352
zwauk
no
zymo_DNA