MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2004-10-05T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248120
External Id
0.908296931
FEV1FVC
0.031375859
FEV1FVCZ
1.820000052
FEV1_baseline
83.86358501
FEVpcpred
2.003750086
FVC
-1.277655541
FVCZ
83.60914199
FVCpcpred
10570
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:49Z
INSDC first public
2022-11-29T01:24:49Z
INSDC last update
public
INSDC status
25964
RawReads_ASVpipeline
SRS10620621
SRA accession
BSP0451
Submitter Id
Not abnormal
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
6.96
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0451
barcode
806rcbc124
barcode_806R
NCBI
broker name
2018-07-10
collection_date
yes
cotrimoxazole
yes
cough_enrl
2011-09-21T00:00:00
dateart
2011-03-02T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
5.42
duryart
2018-07-10T00:00:00
endfollowup
['NA', '2018-01-23T00:00:00']
endtreatdate
2017-02
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.235691554
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
13.7
host_age
18.017811
host_body_mass_index
HIV-associated chronic lung disease
host_disease
83.86358501
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B1055
host_subject_id
human respiratory
host_tissue_sampled
ATACTTCGCAGG
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-07-10T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
08:31:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.0441265
templateDNA_16SqPCR
21.73743347
templateDNA_16SqPCR_Cq
62210.98541
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2018-07-10T00:00:00
visit_date
7
visittotno
3.2576785
vllog
1810
vload
39.2
weight
E03
well
-0.53527766
zbmiuk
-1.6922287
zhauk
-1.4034069
zwauk
no
zymo_DNA