MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1999-03-05T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246686
External Id
0.870947978
FEV1FVC
-0.467396802
FEV1FVCZ
1.779999971
FEV1_baseline
76.20364724
FEVpcpred
2.043750048
FVC
-1.638804969
FVCZ
78.4601945
FVCpcpred
12285
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:34Z
INSDC first public
2022-11-29T01:24:34Z
INSDC last update
public
INSDC status
33001
RawReads_ASVpipeline
SRS10548200
SRA accession
BSP0600
Submitter Id
no
acut_exac12m
Not Adherent
adherence
no
adm
11.36
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0600
barcode
806rcbc261
barcode_806R
NCBI
broker name
2019-01-22
collection_date
yes
cotrimoxazole
no
cough_enrl
2010-07-15T00:00:00
dateart
2010-05-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
7.14
duryart
2019-01-22T00:00:00
endfollowup
['NA', '2018-08-06T00:00:00']
endtreatdate
2017-09
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-1.805879749
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
19.8
host_age
22.062626
host_body_mass_index
HIV-associated chronic lung disease
host_disease
76.20364724
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B1108
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
CTGTAGGAGACC
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-01-22T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R1
run_processing_batch
stored in primestore
samp_mat_process
['1.5', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
11:00:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.868469056
templateDNA_16SqPCR
17.58437009
templateDNA_16SqPCR_Cq
1224396.14
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2019-01-22T00:00:00
visit_date
7
visittotno
48
weight
E08
well
0.12825572
zbmiuk
-2.6730127
zhauk
-1.4317257
zwauk
no
zymo_DNA