MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2006-01-23T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22250797
External Id
0.829521196
FEV1FVC
-0.704030537
FEV1FVCZ
1.700000048
FEV1_baseline
78.64145377
FEVpcpred
2.0493750569999998
FVC
-1.425086834
FVCZ
82.40913442
FVCpcpred
17256
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:45Z
INSDC first public
2022-11-29T01:24:45Z
INSDC last update
public
INSDC status
29070
RawReads_ASVpipeline
SRS10620471
SRA accession
BSP0548
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
3.87
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0548
barcode
806rcbc185
barcode_806R
NCBI
broker name
2018-10-23
collection_date
yes
cotrimoxazole
no
cough_enrl
2009-12-08T00:00:00
dateart
2009-06-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
7.49
duryart
2018-10-23T00:00:00
endfollowup
['NA', '2018-05-08T00:00:00']
endtreatdate
2017-06
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.620662441
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
12.7
host_age
14.171098
host_body_mass_index
HIV-associated chronic lung disease
host_disease
78.64145377
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1081
host_subject_id
human respiratory
host_tissue_sampled
ATGGACCGAACC
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-10-23T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R3
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
08:31:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.039970845
templateDNA_16SqPCR
22.14466206
templateDNA_16SqPCR_Cq
56352.2074
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2018-10-23T00:00:00
visit_date
7
visittotno
31.8
weight
B11
well
-2.4762316
zbmiuk
-0.41451976
zhauk
-1.6290835
zwauk
no
zymo_DNA