MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2003-11-29T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248072
External Id
0.722643193
FEV1FVC
-2.261860255
FEV1FVCZ
1.49000001
FEV1_baseline
64.34966772
FEVpcpred
2.061875105
FVC
-1.779868542
FVCZ
78.03359807
FVCpcpred
17616
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:52Z
INSDC first public
2022-11-29T01:24:52Z
INSDC last update
public
INSDC status
37279
RawReads_ASVpipeline
SRS10620745
SRA accession
BSP0125
Submitter Id
F
WRrepeats
F
WRrepeats_WP
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
8.04
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
yes
attendschool
BSP0125
barcode
806rcbc16
barcode_806R
NCBI
broker name
561
cd4
2017-07-25
collection_date
yes
cotrimoxazole
no
cough_enrl
2011-12-14T00:00:00
dateart
2006-06-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
4.7
duryart
2018-01-11T00:00:00
endfollowup
['NA', '2017-07-20T00:00:00']
endtreatdate
2016-08
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-2.62913149
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
13.6
host_age
24.192257
host_body_mass_index
HIV-associated chronic lung disease
host_disease
64.34966772
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1008
host_subject_id
human respiratory
host_tissue_sampled
TACACGATCTAC
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-01-11T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:05:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.020997872
templateDNA_16SqPCR
22.79
templateDNA_16SqPCR_Cq
29603.48886
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 48
visit
yes
visit012
yes
visit018
yes
visit1218
2017-07-25T00:00:00
visit_date
7
visittotno
1.5910646
vllog
39
vload
55.6
weight
A02
well
1.8542215
zbmiuk
-0.99262232
zhauk
0.88907528
zwauk
no
zymo_DNA