U
BRrepeats
MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2002-12-01T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246728
External Id
1.69
FEV1_baseline
75.34882782
FEVpcpred
16296
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:36Z
INSDC first public
2022-11-29T01:24:36Z
INSDC last update
public
INSDC status
48756
RawReads_ASVpipeline
SRS10548271
SRA accession
BSP0727
Submitter Id
no
acut_exac12m
Not Adherent
adherence
no
adm
8.62
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
yes
attendschool
BSP0727
barcode
806rcbc312
barcode_806R
NCBI
broker name
2019-07-30
collection_date
no
cotrimoxazole
no
cough_enrl
2011-07-15T00:00:00
dateart
2011-05-12T00:00:00
datehiv
6.66
duryart
2019-07-30T00:00:00
endfollowup
['NA', '2019-02-12T00:00:00']
endtreatdate
2018-03
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-1.873976437
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
16.6
host_age
20.217051
host_body_mass_index
HIV-associated chronic lung disease
host_disease
75.34882782
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B1188
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
CTCGGCAATTAT
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-07-30T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R1
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:00:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
0.05332
templateDNA_16SqPCR
21.87
templateDNA_16SqPCR_Cq
75172.28
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2019-07-30T00:00:00
visit_date
7
visittotno
4.3598356
vllog
22900
vload
42.8
weight
H02
well
-0.19432406
zbmiuk
-2.9637737
zhauk
-2.0851645
zwauk
no
zymo_DNA