MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2002-11-26T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249174
External Id
0.761904823
FEV1FVC
-2.095417195
FEV1FVCZ
1.07
FEV1_baseline
46.98148981
FEVpcpred
1.404374957
FVC
-3.482594376
FVCZ
56.07515859
FVCpcpred
19215
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:44Z
INSDC first public
2022-11-29T01:24:44Z
INSDC last update
public
INSDC status
31515
RawReads_ASVpipeline
SRS10550535
SRA accession
BYE12TT3
Submitter Id
Not abnormal
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
12.78
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BYE12TT3
barcode
806rcbc235
barcode_806R
NCBI
broker name
2019-01-07
collection_date
yes
cotrimoxazole
no
cough_enrl
2015-09-07T00:00:00
dateart
2012-03-05T00:00:00
datehiv
1.92
duryart
2019-01-07T00:00:00
endfollowup
['NA', '2018-07-12T00:00:00']
endtreatdate
2017-08
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-3.912698909
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
16.1
host_age
20.176779
host_body_mass_index
HIV-associated chronic lung disease
host_disease
46.98148981
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B3035
host_subject_id
human respiratory
host_tissue_sampled
TAGAACTCACCT
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-01-07T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:50:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
1.010799222
templateDNA_16SqPCR
17.02645979
templateDNA_16SqPCR_Cq
1425057.873
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2019-01-07T00:00:00
visit_date
7
visittotno
43.6
weight
C05
well
-0.12150234
zbmiuk
-2.6762404
zhauk
-1.8060716
zwauk
no
zymo_DNA