MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2004-08-26T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249116
External Id
0.904951241
FEV1FVC
0.145176543
FEV1FVCZ
3.13
FEV1_baseline
119.3100741
FEVpcpred
3.45875001
FVC
1.344894837
FVCZ
117.7672751
FVCpcpred
17195
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:44Z
INSDC first public
2022-11-29T01:24:44Z
INSDC last update
public
INSDC status
40369
RawReads_ASVpipeline
SRS10550519
SRA accession
BSP0383
Submitter Id
no
adm
8.93
ageyart
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0383
barcode
806rcbc17
barcode_806R
NCBI
broker name
679
cd4
2018-04-19
collection_date
yes
cotrimoxazole
2013-07-30T00:00:00
dateart
2010-07-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
4.72
duryart
['NA', 'not applicable']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
1.5194192
fev1z
Zimbabwe: Harare
geo_loc_name
comparison group
group
Homo sapiens
host
13.6
host_age
20.754705
host_body_mass_index
No HIV-associated chronic lung disease
host_disease
119.3100741
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
C119
host_subject_id
human respiratory
host_tissue_sampled
GCACACACGTTA
index_sequence
sputum
isolation_source
17.82 S 31.04 E
lat_lon
yes
one_visit
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
11:24:00
sp05time
no
tbtreat
0.007009494
templateDNA_16SqPCR
24.38
templateDNA_16SqPCR_Cq
9882.213959
templateDNA_16SqPCR_copies
human sputum metagenome
title
Week 0
visit
2018-04-19T00:00:00
visit_date
555
vload
54.2
weight
B02
well
0.58180416
zbmiuk
0.49968293
zhauk
0.65621257
zwauk
no
zymo_DNA