MIGS/MIMS/MIMARKS.host-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1999-04-21T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248993
External Id
0.799373011
FEV1FVC
-1.115421729
FEV1FVCZ
2.549999952
FEV1_baseline
76.35708259
FEVpcpred
3.1900000569999998
FVC
-1.360206872
FVCZ
83.06295564
FVCpcpred
17240
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:41Z
INSDC first public
2022-11-29T01:24:41Z
INSDC last update
public
INSDC status
35512
RawReads_ASVpipeline
SRS10550397
SRA accession
BSP0640
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
12.9
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0640
barcode
806rcbc100
barcode_806R
NCBI
broker name
2019-02-20
collection_date
yes
cotrimoxazole
no
cough_enrl
2012-03-15T00:00:00
dateart
2012-02-15T00:00:00
datehiv
5.56
duryart
2019-02-20T00:00:00
endfollowup
['NA', '2018-09-05T00:00:00']
endtreatdate
2017-10
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.835126173
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
19.8
host_age
19.635952
host_body_mass_index
HIV-associated chronic lung disease
host_disease
76.35708259
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1135
host_subject_id
human respiratory
host_tissue_sampled
ACCACATACATC
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-02-20T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:40:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.211968816
templateDNA_16SqPCR
19.33667762
templateDNA_16SqPCR_Cq
298840.5836
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2019-02-20T00:00:00
visit_date
7
visittotno
53.2
weight
E12
well
-1.0270878
zbmiuk
-1.8249052
zhauk
-2.22631
zwauk
no
zymo_DNA