MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2007-04-24T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
B
EXrepeats
SAMN22250804
External Id
27308
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:46Z
INSDC first public
2022-11-29T01:24:46Z
INSDC last update
public
INSDC status
39595
RawReads_ASVpipeline
SRS10620493
SRA accession
EXrepeat_BSP0355
Submitter Id
Adherent
adherence
no
adm
5.14
ageyart
no
artdrug1stline
no
artdrug2ndline
ATV/LPV/PI
artreg
yes
attendschool
BSP0355
barcode
806rcbc340
barcode_806R
NCBI
broker name
2018-03-21
collection_date
no
cotrimoxazole
no
cough_enrl
2012-06-15T00:00:00
dateart
2012-03-25T00:00:00
datehiv
5.76
duryart
2019-08-07T00:00:00
endfollowup
['not applicable', '2019-02-20T00:00:00']
endtreatdate
2018-03
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
Zimbabwe: Harare
geo_loc_name
trial
group
Homo sapiens
host
10.9
host_age
HIV-associated chronic lung disease
host_disease
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1193
host_subject_id
human respiratory
host_tissue_sampled
CGTCTGGTTCCT
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-08-07T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
rs14antib
R3
run_processing_batch
stored in primestore
samp_mat_process
['not applicable', '']
samp_size
-80 °C
samp_store_temp
yes
sample_extraction_controls
sequencing_control
sample_type
expectorated
sampling_induced_expectorated
EXrepeat
sequencing_control_details
yes
sequencing_controls
no
smoker
completed 18 months
study_complt_stat
yes
tbtreat
1.2
templateDNA_16SqPCR
17.12881336
templateDNA_16SqPCR_Cq
1688193.296
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 0
visit
7
visittotno
D06
well
no
zymo_DNA