MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2000-12-04T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22250776
External Id
0.869594984
FEV1FVC
-0.111714924
FEV1FVCZ
3.180000067
FEV1_baseline
93.14797637
FEVpcpred
3.656874895
FVC
-0.524233293
FVCZ
93.46605026
FVCpcpred
19928
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:47Z
INSDC first public
2022-11-29T01:24:47Z
INSDC last update
public
INSDC status
33538
RawReads_ASVpipeline
SRS10620545
SRA accession
BSP0315
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
12.93
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
no
attendschool
BSP0315
barcode
806rcbc124
barcode_806R
NCBI
broker name
2018-02-22
collection_date
no
cotrimoxazole
no
cough_enrl
2013-11-07T00:00:00
dateart
2013-10-07T00:00:00
datehiv
2.91
duryart
2018-02-22T00:00:00
endfollowup
['NA', '2017-09-07T00:00:00']
endtreatdate
2016-10
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-0.522790441
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
17.2
host_age
17.296312
host_body_mass_index
HIV-associated chronic lung disease
host_disease
93.14797637
host_height
yes
host_hiv_stat
male
host_sex
B1018
host_subject_id
human respiratory
host_tissue_sampled
ATACTTCGCAGG
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-02-22T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R3
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:06:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.926314777
templateDNA_16SqPCR
17.6320214
templateDNA_16SqPCR_Cq
1305948.934
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2018-02-22T00:00:00
visit_date
7
visittotno
3.3521826
vllog
2250
vload
49.4
weight
E03
well
-1.7377311
zbmiuk
-1.0196512
zhauk
-2.0370433
zwauk
no
zymo_DNA