MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1999-09-17T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246905
External Id
0.853441691
FEV1FVC
-0.806509974
FEV1FVCZ
2.1
FEV1_baseline
87.1886026
FEVpcpred
2.460624933
FVC
-0.605498936
FVCZ
91.97718769
FVCpcpred
19135
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:37Z
INSDC first public
2022-11-29T01:24:37Z
INSDC last update
public
INSDC status
46563
RawReads_ASVpipeline
SRS10548887
SRA accession
BYC12AT3
Submitter Id
no
acut_exac12m
Adherent
adherence
no
all_3
no
antibiotic12m
0
any3_reasons
BYC12AT3
barcode
806rcbc75
barcode_806R
NCBI
broker name
569
cd4
2018-02-07
collection_date
['2019-01-09T00:00:00', 'missing']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
3
f24mrcscore
-0.9832902
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
18.3
host_age
23.042248
host_body_mass_index
HIV-associated chronic lung disease
host_disease
87.1886026
host_height
yes
host_hiv_stat
B3072
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
CCTGAACTAGTT
index_sequence
sputum
isolation_source
15.77 S 35.02 E
lat_lon
no
one_visit
yes
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R1
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:25:00
sp05time
0.035147181
templateDNA_16SqPCR
22.44877629
templateDNA_16SqPCR_Cq
49551.65
templateDNA_16SqPCR_copies
human sputum metagenome
title
Azithromycin
trial_arm
Week 0
visit
yes
visit012
no
visit018
no
visit1218
2018-01-27T00:00:00
visit_date
0
vllog
0
vload
51.5
weight
D09
well
0.59184235
zbmiuk
-2.3353236
zhauk
-0.83275968
zwauk
no
zymo_DNA