MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2001-01-13T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
A
EXrepeats
SAMN22250777
External Id
0.85679898
FEV1FVC
-0.789272821
FEV1FVCZ
1.78
FEV1_baseline
71.4223517
FEVpcpred
2.077500105
FVC
-1.913645515
FVCZ
75.19205128
FVCpcpred
25718
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:47Z
INSDC first public
2022-11-29T01:24:47Z
INSDC last update
public
INSDC status
40145
RawReads_ASVpipeline
SRS10620550
SRA accession
BSP0317
Submitter Id
Abnormal HR
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
yes
acut_exac12m
Not Adherent
adherence
no
adm
8.83
ageyart
yes
all_3
no
antibiotic12m
2
any3_reasons
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
yes
attendschool
BSP0317
barcode
806rcbc86
barcode_806R
NCBI
broker name
2018-02-23
collection_date
yes
cotrimoxazole
no
cough_enrl
2009-11-13T00:00:00
dateart
2009-10-15T00:00:00
datehiv
CIPROFLOXACIN
drug_usage
6.9
duryart
2018-02-23T00:00:00
endfollowup
['NA', '2017-09-07T00:00:00']
endtreatdate
2016-10
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-2.164271082
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
yes
hospitalised12m
Homo sapiens
host
17.1
host_age
18.207771
host_body_mass_index
HIV-associated chronic lung disease
host_disease
71.4223517
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B1019
host_subject_id
human respiratory
host_tissue_sampled
TCCCAGAACAAC
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-02-23T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
gastritis
reason_hospi
yes
rs14antib
CIPROFLOXACIN
rs15antibty
R3
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:40:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
0.0169
templateDNA_16SqPCR
23.59012222
templateDNA_16SqPCR_Cq
23785.97107
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2018-02-23T00:00:00
visit_date
7
visittotno
5.9498777
vllog
891000
vload
42.4
weight
G10
well
-1.1776927
zbmiuk
-1.8033932
zhauk
-2.2452488
zwauk
no
zymo_DNA