MIGS/MIMS/MIMARKS.host-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1997-10-10T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249033
External Id
0.851063779
FEV1FVC
-0.521041999
FEV1FVCZ
2.3
FEV1_baseline
81.03799263
FEVpcpred
2.702500105
FVC
-1.284602523
FVCZ
84.00106001
FVCpcpred
16943
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:40Z
INSDC first public
2022-11-29T01:24:40Z
INSDC last update
public
INSDC status
35172
RawReads_ASVpipeline
SRS10550361
SRA accession
BYC10WT3
Submitter Id
Abnormal HR
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Not Adherent
adherence
no
adm
4.68
ageyart
no
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BYC10WT3
barcode
806rcbc86
barcode_806R
NCBI
broker name
141
cd4
2017-07-24
collection_date
yes
cotrimoxazole
yes
cough_enrl
2002-06-15T00:00:00
dateart
2001-06-15T00:00:00
datehiv
43137
dod
15.11
duryart
2018-02-06T00:00:00
endfollowup
['NA', 'NA']
endtreatdate
2017-07
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
3
f24mrcscore
-1.4768406
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
19.7
host_age
17.600069
host_body_mass_index
HIV-associated chronic lung disease
host_disease
81.03799263
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B3029
host_subject_id
human respiratory
host_tissue_sampled
TCCCAGAACAAC
index_sequence
sputum
isolation_source
6 mths
lastvisit
2018-01-08T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
yes
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['0.5', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:35:00
sp05time
death
study_complt_stat
no
tbtreat
0.0282
templateDNA_16SqPCR
22.28403694
templateDNA_16SqPCR_Cq
39770.14219
templateDNA_16SqPCR_copies
human sputum metagenome
title
Died
treatstopreason
Placebo
trial_arm
Week 0
visit
no
visit012
no
visit018
no
visit1218
2017-07-15T00:00:00
visit_date
3
visittotno
4.5910645
vllog
39000
vload
41.2
weight
G10
well
-2.209389
zbmiuk
-3.4878252
zhauk
-4.7930741
zwauk
no
zymo_DNA