MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2006-06-14T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249112
External Id
0.873396896
FEV1FVC
-0.110120178
FEV1FVCZ
1.66
FEV1_baseline
106.770073
FEVpcpred
1.90062499
FVC
0.602487322
FVCZ
107.5068619
FVCpcpred
13789
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:44Z
INSDC first public
2022-11-29T01:24:44Z
INSDC last update
public
INSDC status
31560
RawReads_ASVpipeline
SRS10550526
SRA accession
BSP0187
Submitter Id
no
adm
3.05
ageyart
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0187
barcode
806rcbc254
barcode_806R
NCBI
broker name
642
cd4
2017-09-19
collection_date
yes
cotrimoxazole
2009-07-01T00:00:00
dateart
2009-06-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
8.22
duryart
['NA', 'not applicable']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
0.54035825
fev1z
Zimbabwe: Harare
geo_loc_name
comparison group
group
Homo sapiens
host
11.2
host_age
15.610652
host_body_mass_index
No HIV-associated chronic lung disease
host_disease
106.770073
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
C138
host_subject_id
human respiratory
host_tissue_sampled
TAAGGCCTATCG
index_sequence
sputum
isolation_source
17.82 S 31.04 E
lat_lon
yes
one_visit
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
11:28:00
sp05time
no
tbtreat
0.0132
templateDNA_16SqPCR
23.40087561
templateDNA_16SqPCR_Cq
18679.78942
templateDNA_16SqPCR_copies
human sputum metagenome
title
Week 0
visit
2017-09-19T00:00:00
visit_date
858
vload
27.2
weight
F07
well
-0.83231169
zbmiuk
-1.861609
zhauk
-1.7566708
zwauk
no
zymo_DNA