MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1999-05-12T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248087
External Id
0.741721797
FEV1FVC
-2.180478332
FEV1FVCZ
0.84
FEV1_baseline
33.02168213
FEVpcpred
1.132500052
FVC
-4.823958476
FVCZ
39.88292681
FVCpcpred
20770
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:48Z
INSDC first public
2022-11-29T01:24:48Z
INSDC last update
public
INSDC status
36314
RawReads_ASVpipeline
SRS10620610
SRA accession
BSP0261
Submitter Id
M
WRrepeats
M
WRrepeats_WP
Abnormal HR
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
yes
acut_exac12m
Adherent
adherence
no
adm
12.26
ageyart
yes
all_3
no
antibiotic12m
1
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
no
attendschool
BSP0261
barcode
806rcbc46
barcode_806R
NCBI
broker name
22
cd4
2018-01-09
collection_date
yes
cotrimoxazole
yes
cough_enrl
2011-08-15T00:00:00
dateart
2009-06-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
5.48
duryart
2018-06-26T00:00:00
endfollowup
['NA', '2018-01-09T00:00:00']
endtreatdate
2017-02
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
2
f24mrcscore
-4.84734357
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
18.6
host_age
18.903944
host_body_mass_index
HIV-associated chronic lung disease
host_disease
33.02168213
host_height
yes
host_hiv_stat
female
host_sex
B1050
host_subject_id
human respiratory
host_tissue_sampled
TCCGAATTCACA
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-06-26T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:20:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.33159832
templateDNA_16SqPCR
18.67740706
templateDNA_16SqPCR_Cq
467498.1798
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 48
visit
yes
visit012
yes
visit018
yes
visit1218
2018-01-09T00:00:00
visit_date
7
visittotno
5.6334686
vllog
430000
vload
44.6
weight
G05
well
-1.0559646
zbmiuk
-1.6591678
zhauk
-1.9820478
zwauk
no
zymo_DNA