MIGS/MIMS/MIMARKS.host-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2001-09-10T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249003
External Id
0.834865112
FEV1FVC
-0.849848484
FEV1FVCZ
1.75999999
FEV1_baseline
65.217134
FEVpcpred
2.108124971
FVC
-2.459589706
FVCZ
69.55130008
FVCpcpred
15146
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:41Z
INSDC first public
2022-11-29T01:24:41Z
INSDC last update
public
INSDC status
31931
RawReads_ASVpipeline
SRS10550419
SRA accession
BSP0672
Submitter Id
Not abnormal
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
6.09
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
yes
attendschool
BSP0672
barcode
806rcbc378
barcode_806R
NCBI
broker name
2019-04-29
collection_date
no
cotrimoxazole
no
cough_enrl
2007-10-15T00:00:00
dateart
2007-09-15T00:00:00
datehiv
10.13
duryart
2019-04-29T00:00:00
endfollowup
['NA', '2018-11-01T00:00:00']
endtreatdate
2017-11
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-2.613986438
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
17.6
host_age
15.792716
host_body_mass_index
HIV-associated chronic lung disease
host_disease
65.217134
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1154
host_subject_id
human respiratory
host_tissue_sampled
GTGTTGCAGCAT
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-04-29T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:40:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
0.268140434
templateDNA_16SqPCR
19.15848753
templateDNA_16SqPCR_Cq
378033.1728
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2019-04-29T00:00:00
visit_date
7
visittotno
36.2
weight
B11
well
-2.9668965
zbmiuk
-3.6013651
zhauk
-5.090745
zwauk
no
zymo_DNA