MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2002-12-22T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22250756
External Id
0.939271192
FEV1FVC
0.619858951
FEV1FVCZ
2.029999971
FEV1_baseline
85.44245921
FEVpcpred
2.161250114
FVC
-1.372224684
FVCZ
82.31410172
FVCpcpred
21412
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:47Z
INSDC first public
2022-11-29T01:24:47Z
INSDC last update
public
INSDC status
35760
RawReads_ASVpipeline
SRS10620535
SRA accession
BSP0147
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
3.97
ageyart
no
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0147
barcode
806rcbc221
barcode_806R
NCBI
broker name
633
cd4
2017-08-18
collection_date
yes
cotrimoxazole
no
cough_enrl
2006-12-11T00:00:00
dateart
2006-07-01T00:00:00
datehiv
9.77
duryart
2018-01-25T00:00:00
endfollowup
['NA', '2017-08-18T00:00:00']
endtreatdate
2016-09
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.116376744
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
14.6
host_age
19.909973
host_body_mass_index
HIV-associated chronic lung disease
host_disease
85.44245921
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B1014
host_subject_id
human respiratory
host_tissue_sampled
TGGAGCACGTTG
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-01-25T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
yes
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P3
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
R3
run_processing_batch
stored in primestore
samp_mat_process
['NA', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
completed 18 months
study_complt_stat
no
tbtreat
0.000917
templateDNA_16SqPCR
27.66801712
templateDNA_16SqPCR_Cq
1292.464332
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 48
visit
no
visit012
no
visit018
yes
visit1218
2017-08-18T00:00:00
visit_date
7
visittotno
2.0492179
vllog
112
vload
46
weight
E03
well
0.054750219
zbmiuk
-1.5024217
zhauk
-0.86978215
zwauk
no
zymo_DNA