MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2006-02-17T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22248046
External Id
1.11
FEV1_baseline
76.97342247
FEVpcpred
21742
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:50Z
INSDC first public
2022-11-29T01:24:50Z
INSDC last update
public
INSDC status
45041
RawReads_ASVpipeline
SRS10620660
SRA accession
BSP0028
Submitter Id
Not abnormal
abnhr
Abnormal RR
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
3.87
ageyart
yes
all_3
yes
antibiotic12m
1
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0028
barcode
806rcbc58
barcode_806R
NCBI
broker name
1044
cd4
2016-10-18
collection_date
yes
cotrimoxazole
no
cough_enrl
2010-01-01T00:00:00
dateart
2008-05-27T00:00:00
datehiv
6.8
duryart
2018-03-06T00:00:00
endfollowup
['2017-09-19T00:00:00', '2017-09-19T00:00:00']
endtreatdate
2016-10
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.8260736
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
10.6
host_age
15.187514
host_body_mass_index
HIV-associated chronic lung disease
host_disease
76.97342247
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1027
host_subject_id
human respiratory
host_tissue_sampled
AATGCCTCAACT
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-03-06T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
11:20:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.00669724
templateDNA_16SqPCR
24.38488446
templateDNA_16SqPCR_Cq
9441.98839
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 0
visit
yes
visit012
yes
visit018
yes
visit1218
2016-10-11T00:00:00
visit_date
7
visittotno
3.2944663
vllog
1970
vload
25
weight
C07
well
-0.94839025
zbmiuk
-2.0770767
zhauk
-2.0379753
zwauk
no
zymo_DNA