MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2005-06-20T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249163
External Id
0.915077964
FEV1FVC
0.110209477
FEV1FVCZ
1.65
FEV1_baseline
81.51892179
FEVpcpred
1.803125024
FVC
-1.488507002
FVCZ
80.97008575
FVCpcpred
27571
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:43Z
INSDC first public
2022-11-29T01:24:43Z
INSDC last update
public
INSDC status
46997
RawReads_ASVpipeline
SRS10550499
SRA accession
BYD14GT3
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Not Adherent
adherence
no
adm
2.99
ageyart
no
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BYD14GT3
barcode
806rcbc349
barcode_806R
NCBI
broker name
763
cd4
2019-02-11
collection_date
yes
cotrimoxazole
no
cough_enrl
2008-06-15T00:00:00
dateart
2008-06-15T00:00:00
datehiv
9.73
duryart
2019-05-08T00:00:00
endfollowup
['NA', '2019-02-11T00:00:00']
endtreatdate
2018-03
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
3
f24mrcscore
-1.41236567
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
13.6
host_age
14.279427
host_body_mass_index
HIV-associated chronic lung disease
host_disease
81.51892179
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
B3081
host_subject_id
human respiratory
host_tissue_sampled
ATATTCCCAGGT
index_sequence
sputum
isolation_source
15 mths
lastvisit
2019-05-08T00:00:00
lastvisitdate
15.77 S 35.02 E
lat_lon
no
one_visit
yes
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
10:40:00
sp05time
study ended
study_complt_stat
no
tbtreat
0.00230158
templateDNA_16SqPCR
26.15531423
templateDNA_16SqPCR_Cq
3244.842801
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Azithromycin
trial_arm
Week 48
visit
yes
visit012
no
visit018
no
visit1218
2019-02-11T00:00:00
visit_date
6
visittotno
1.5910646
vllog
39
vload
29.2
weight
E07
well
-2.7740321
zbmiuk
-2.2835755
zhauk
-3.2749557
zwauk
no
zymo_DNA