MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1999-07-06T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249114
External Id
0.85614576
FEV1FVC
-0.690340918
FEV1FVCZ
2.76
FEV1_baseline
102.6688881
FEVpcpred
3.223750114
FVC
0.532465897
FVCZ
107.152035
FVCpcpred
18064
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:44Z
INSDC first public
2022-11-29T01:24:44Z
INSDC last update
public
INSDC status
40004
RawReads_ASVpipeline
SRS10550522
SRA accession
BSP0243
Submitter Id
no
adm
9.99
ageyart
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0243
barcode
806rcbc383
barcode_806R
NCBI
broker name
160
cd4
2017-12-04
collection_date
yes
cotrimoxazole
2009-07-01T00:00:00
dateart
2009-06-15T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
8.43
duryart
['NA', 'not applicable']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
0.20737353
fev1z
Zimbabwe: Harare
geo_loc_name
comparison group
group
Homo sapiens
host
18.4
host_age
21.552687
host_body_mass_index
No HIV-associated chronic lung disease
host_disease
102.6688881
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
C122
host_subject_id
human respiratory
host_tissue_sampled
TAACAAGGAACG
index_sequence
sputum
isolation_source
17.82 S 31.04 E
lat_lon
yes
one_visit
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P4
plate_number
HIV-associated chronic lung disease
pulmonary_disord
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
11:57:00
sp05time
no
tbtreat
0.091243699
templateDNA_16SqPCR
20.74371461
templateDNA_16SqPCR_Cq
128638.3569
templateDNA_16SqPCR_copies
human sputum metagenome
title
Week 0
visit
2017-12-04T00:00:00
visit_date
86
vload
53.6
weight
G11
well
0.08687605
zbmiuk
-0.97835654
zhauk
-0.53565681
zwauk
no
zymo_DNA