MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2007-10-09T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22108638
External Id
0.773834375
FEV1FVC
-1.545955592
FEV1FVCZ
1.389999986
FEV1_baseline
80.49855695
FEVpcpred
1.796249986
FVC
-0.776680195
FVCZ
90.3211073
FVCpcpred
8627
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:29Z
INSDC first public
2022-11-29T01:24:29Z
INSDC last update
public
INSDC status
27584
RawReads_ASVpipeline
SRS10483920
SRA accession
BSP0401
Submitter Id
no
acut_exac12m
Adherent
adherence
no
adm
7.66
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0401
barcode
806rcbc45
barcode_806R
NCBI
broker name
878
cd4
2018-05-21
collection_date
yes
cotrimoxazole
no
cough_enrl
2015-06-08T00:00:00
dateart
2014-04-28T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
2.03
duryart
2018-11-05T00:00:00
endfollowup
['NA', '2018-05-21T00:00:00']
endtreatdate
2017-06
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-1.54959984
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
10.6
host_age
16.491028
host_body_mass_index
HIV-associated chronic lung disease
host_disease
80.49855695
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1086
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
GTCTAATTCCGA
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-11-05T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R1
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:05:00
sp05time
completed 18 months
study_complt_stat
yes
tbtreat
1.157833016
templateDNA_16SqPCR
17.37888018
templateDNA_16SqPCR_Cq
1632350.94
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 48
visit
yes
visit012
yes
visit018
yes
visit1218
2018-05-21T00:00:00
visit_date
7
visittotno
2.7759743
vllog
597
vload
32
weight
F05
well
-0.11559197
zbmiuk
-0.34420991
zhauk
-0.2489071
zwauk
no
zymo_DNA