MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2000-12-04T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22250729
External Id
0.843171972
FEV1FVC
-0.622810878
FEV1FVCZ
2.08
FEV1_baseline
72.21083073
FEVpcpred
2.466875076
FVC
-1.974251611
FVCZ
75.55997511
FVCpcpred
24762
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:47Z
INSDC first public
2022-11-29T01:24:47Z
INSDC last update
public
INSDC status
39083
RawReads_ASVpipeline
SRS10620544
SRA accession
BSP0018
Submitter Id
Abnormal HR
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
no
adm
12.93
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
no
attendschool
BSP0018
barcode
806rcbc108
barcode_806R
NCBI
broker name
263
cd4
2016-10-06
collection_date
no
cotrimoxazole
no
cough_enrl
2013-11-07T00:00:00
dateart
2013-10-07T00:00:00
datehiv
2.91
duryart
2018-02-22T00:00:00
endfollowup
['2017-09-07T00:00:00', '2017-09-07T00:00:00']
endtreatdate
2016-10
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-2.0511951
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
15.8
host_age
16.290701
host_body_mass_index
HIV-associated chronic lung disease
host_disease
72.21083073
host_height
yes
host_hiv_stat
male
host_sex
B1018
host_subject_id
human respiratory
host_tissue_sampled
TATCAGGTGTGC
index_sequence
sputum
isolation_source
18 mths
lastvisit
2018-02-22T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R3
run_processing_batch
stored in primestore
samp_mat_process
['1', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
09:59:00
sp05time
completed 18 months
study_complt_stat
no
tbtreat
0.01482161
templateDNA_16SqPCR
23.65223937
templateDNA_16SqPCR_Cq
20895.99184
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 0
visit
yes
visit012
yes
visit018
yes
visit1218
2016-10-04T00:00:00
visit_date
7
visittotno
3.454845
vllog
2850
vload
41.6
weight
E01
well
-1.9778023
zbmiuk
-1.6911578
zhauk
-2.3221459
zwauk
no
zymo_DNA