MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2000-11-02T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246629
External Id
0.882716014
FEV1FVC
-0.341366101
FEV1FVCZ
2.86
FEV1_baseline
110.1014595
FEVpcpred
3.24000001
FVC
0.902755428
FVCZ
112.123392
FVCpcpred
10415
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:33Z
INSDC first public
2022-11-29T01:24:33Z
INSDC last update
public
INSDC status
37935
RawReads_ASVpipeline
SRS10548181
SRA accession
BSP0352
Submitter Id
no
adm
15.15
ageyart
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0352
barcode
806rcbc81
barcode_806R
NCBI
broker name
700
cd4
2018-03-19
collection_date
yes
cotrimoxazole
2015-12-28T00:00:00
dateart
2015-12-22T00:00:00
datehiv
COTRIMOXAZOLE
drug_usage
2.22
duryart
['NA', 'not applicable']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
0.78974009
fev1z
Zimbabwe: Harare
geo_loc_name
comparison group
group
Homo sapiens
host
17.3
host_age
22.332275
host_body_mass_index
No HIV-associated chronic lung disease
host_disease
110.1014595
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
C120
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
ACATTCAGCGCA
index_sequence
sputum
isolation_source
17.82 S 31.04 E
lat_lon
yes
one_visit
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P1
plate_number
HIV-associated chronic lung disease
pulmonary_disord
yes
rs14antib
COTRIMOXAZOLE
rs15antibty
R1
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
12:00:00
sp05time
no
tbtreat
0.59748218
templateDNA_16SqPCR
18.33864448
templateDNA_16SqPCR_Cq
842349.96
templateDNA_16SqPCR_copies
human sputum metagenome
title
Week 0
visit
2018-03-19T00:00:00
visit_date
0
vload
54
weight
B10
well
0.47415602
zbmiuk
-1.3252877
zhauk
-0.40593788
zwauk
no
zymo_DNA