MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
2005-02-13T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22249177
External Id
0.849448513
FEV1FVC
-0.919215482
FEV1FVCZ
2.07
FEV1_baseline
88.7955471
FEVpcpred
2.436875105
FVC
-0.433551828
FVCZ
94.37127396
FVCpcpred
22812
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:42Z
INSDC first public
2022-11-29T01:24:42Z
INSDC last update
public
INSDC status
43606
RawReads_ASVpipeline
SRS10550464
SRA accession
BYE133T3
Submitter Id
Not abnormal
abnhr
Not abnormal
abnrr
Not abnormal
abnsat
no
acut_exac12m
Adherent
adherence
yes
all_3
no
antibiotic12m
0
any3_reasons
BYE133T3
barcode
806rcbc157
barcode_806R
NCBI
broker name
2019-02-13
collection_date
['NA', 'missing']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
3
f24mrcscore
-0.861600187
fev1z
Malawi: Blantyre
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
14
host_age
24.671053
host_body_mass_index
HIV-associated chronic lung disease
host_disease
88.7955471
host_height
yes
host_hiv_stat
B3045
host_subject_id
human respiratory
host_tissue_sampled
CCATGCGATAAC
index_sequence
sputum
isolation_source
15.77 S 35.02 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
no
rs14antib
R2
run_processing_batch
stored in primestore
samp_mat_process
['2', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
08:35:00
sp05time
0.001889738
templateDNA_16SqPCR
26.32709764
templateDNA_16SqPCR_Cq
2664.214867
templateDNA_16SqPCR_copies
human sputum metagenome
title
Azithromycin
trial_arm
Week 72
visit
yes
visit012
yes
visit018
yes
visit1218
2019-02-13T00:00:00
visit_date
57
weight
F07
well
1.6110671
zbmiuk
-1.1620646
zhauk
0.79206586
zwauk
no
zymo_DNA