MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1999-09-07T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246685
External Id
0.845829183
FEV1FVC
-0.407679598
FEV1FVCZ
2.630000114
FEV1_baseline
73.87296839
FEVpcpred
3.109375
FVC
-1.963648047
FVCZ
75.61378925
FVCpcpred
16740
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:35Z
INSDC first public
2022-11-29T01:24:35Z
INSDC last update
public
INSDC status
39478
RawReads_ASVpipeline
SRS10548250
SRA accession
BSP0595
Submitter Id
no
acut_exac12m
Adherent
adherence
no
adm
7.57
ageyart
yes
all_3
no
antibiotic12m
0
any3_reasons
yes
artdrug1stline
no
artdrug2ndline
EFV/NVP
artreg
yes
attendschool
BSP0595
barcode
806rcbc123
barcode_806R
NCBI
broker name
456
cd4
2019-01-11
collection_date
yes
cotrimoxazole
no
cough_enrl
2007-04-03T00:00:00
dateart
2006-07-24T00:00:00
datehiv
10.83
duryart
2019-06-20T00:00:00
endfollowup
['NA', '2019-01-03T00:00:00']
endtreatdate
2018-02
enrolmonth
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
-2.016912593
fev1z
Zimbabwe: Harare
geo_loc_name
trial
group
no
hospitalised12m
Homo sapiens
host
19.3
host_age
18.959591
host_body_mass_index
HIV-associated chronic lung disease
host_disease
73.87296839
host_height
yes
host_hiv_stat
student
host_occupation
male
host_sex
B1169
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
GTCTACACACAT
index_sequence
sputum
isolation_source
18 mths
lastvisit
2019-06-20T00:00:00
lastvisitdate
17.82 S 31.04 E
lat_lon
no
one_visit
no
only2visits
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
no
reason_hospi
R1
run_processing_batch
stored in primestore
samp_mat_process
['NA', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
no
sequencing_controls
no
smoker
completed 18 months
study_complt_stat
no
tbtreat
0.434871034
templateDNA_16SqPCR
18.70419826
templateDNA_16SqPCR_Cq
613095.44
templateDNA_16SqPCR_copies
human sputum metagenome
title
Completed
treatstopreason
Placebo
trial_arm
Week 48
visit
yes
visit012
yes
visit018
yes
visit1218
2019-01-11T00:00:00
visit_date
7
visittotno
0
vllog
0
vload
54.6
weight
D03
well
-1.2846664
zbmiuk
-1.0896634
zhauk
-1.9024364
zwauk
no
zymo_DNA