MIGS/MIMS/MIMARKS.human-associated
BioSampleModel
MIMARKS.survey
BioSampleModel
1999-07-13T00:00:00
DOB
2022-11-29
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
SAMN22246620
External Id
0.864777326
FEV1FVC
-0.565437365
FEV1FVCZ
2.67
FEV1_baseline
102.0078329
FEVpcpred
3.087500095
FVC
0.41145365
FVCZ
105.5224265
FVCpcpred
17129
FinalReads_ASVpipeline
pda|214583989
INSDC center alias
pda|214583989
INSDC center name
2022-11-29T01:24:33Z
INSDC first public
2022-11-29T01:24:33Z
INSDC last update
public
INSDC status
44810
RawReads_ASVpipeline
SRS10548182
SRA accession
BSP0299
Submitter Id
yes
adm
10.31
ageyart
no
artdrug1stline
yes
artdrug2ndline
ATV/LPV/PI
artreg
yes
attendschool
BSP0299
barcode
806rcbc140
barcode_806R
NCBI
broker name
384
cd4
2018-02-08
collection_date
no
cotrimoxazole
2009-11-04T00:00:00
dateart
2009-06-08T00:00:00
datehiv
8.26
duryart
['NA', 'not applicable']
endtreatdate
human
env_broad_scale
respiratory tract
env_local_scale
sputum
env_medium
black
ethnicity
1
f24mrcscore
0.15590861
fev1z
Zimbabwe: Harare
geo_loc_name
comparison group
group
Homo sapiens
host
18.5
host_age
17.819952
host_body_mass_index
No HIV-associated chronic lung disease
host_disease
102.0078329
host_height
yes
host_hiv_stat
student
host_occupation
female
host_sex
C124
host_subject_id
['human respiratory', 'human respiratory']
host_tissue_sampled
CGCCAAATAACC
index_sequence
sputum
isolation_source
17.82 S 31.04 E
lat_lon
1
nadm
yes
one_visit
human sputum metagenome
http://purl.obolibrary.org/obo/NCBITaxon_2517771
organism
P2
plate_number
HIV-associated chronic lung disease
pulmonary_disord
R1
run_processing_batch
stored in primestore
samp_mat_process
['NA', '']
samp_size
-80 °C
samp_store_temp
no
sample_extraction_controls
SP
sample_type
expectorated
sampling_induced_expectorated
no
sequencing_controls
no
smoker
no
tbtreat
0.067124425
templateDNA_16SqPCR
21.50803947
templateDNA_16SqPCR_Cq
94634.21
templateDNA_16SqPCR_copies
human sputum metagenome
title
Week 0
visit
2018-02-08T00:00:00
visit_date
80
vload
43.2
weight
E05
well
-1.6060216
zbmiuk
-1.3112925
zhauk
-2.2416849
zwauk
no
zymo_DNA