SARS-CoV-2: wastewater surveillance
BioSampleModel
2022-12-10
ENA-FIRST-PUBLIC
2022-12-10
ENA-LAST-UPDATE
SAMN32119917
External Id
CLT
INSDC center alias
CLT
INSDC center name
2022-12-10T01:14:23Z
INSDC first public
2022-12-10T01:14:23Z
INSDC last update
public
INSDC status
SRS16012555
SRA accession
WK91-3393_BioSample
Submitter Id
NCBI
broker name
North Carolina Department of Health and Human Services
collected_by
2022-10-07
collection_date
WK91-3393
collection_site_id
08:00
collection_time
40
collection_volume
membrane filtration with acidification and mgcl2
concentration_method
bcov vaccine
extraction_control
nuclisens manual magnetic bead extraction kit
extraction_method
USA: North Carolina
geo_loc_name
wastewater
isolation_source
wastewater metagenome
http://purl.obolibrary.org/obo/NCBITaxon_527639
organism
wastewater metagenome
organism
Wastewater sequencing of NC Wastewater Monitoring Network samples
project_name
public health surveillance community-level
purpose_of_ww_sampling
public health surveillance for the NC Wastewater Monitoring Network
purpose_of_ww_sequencing
WK91-3393
sample_name
tuckaseigee
sample_title
University of North Carolina at Charlotte
sequenced_by
10-22-22-2-V2 BioSample
title
pepper mild mottle virus
ww_endog_control_1
racki et al. 2014; haramoto et al 201
ww_endog_control_1_protocol
1.04
ww_flow
6.7
ww_ph
13296
ww_population
census blocks clipped to wastewater service area polygon
ww_population_source
yes
ww_pre_treatment
24
ww_sample_duration
raw wastewater
ww_sample_matrix
wastewater treatment plant
ww_sample_site
composite
ww_sample_type
NC
ww_surv_jurisdiction
NCWW11734
ww_surv_system_sample_id
SARS-CoV-2
ww_surv_target_1
8073.13174
ww_surv_target_1_conc
copies/L
ww_surv_target_1_conc_unit
N gene (N1)
ww_surv_target_1_gene
yes
ww_surv_target_1_known_present
lu et al. us cdc real-time reverse transcription pcr panel for detection of severe acutre respirtaory syndrome coronavirus 2- volume 26, number 8 - august 2020 - emerging infectious diseases journal - cdc
ww_surv_target_1_protocol
SARS-CoV-2
ww_surv_target_2
12413.6284
ww_surv_target_2_conc
copies/L
ww_surv_target_2_conc_unit
N gene (N2)
ww_surv_target_2_gene
yes
ww_surv_target_2_known_present
4
ww_temperature