SAMN30866127
External Id
Balochistan University of Information Technology, Engineering and management Sciences
INSDC center name
2022-09-15T00:00:00Z
INSDC first public
2022-12-16T21:06:21.459Z
INSDC last update
live
INSDC status
MIGS.ba
NCBI submission model
MIGS/MIMS/MIMARKS.plant-associated
NCBI submission model
MIGS.ba.plant-associated.5.0
NCBI submission package
2008
collection_date
Pseudomonas stutzeri A1501 the gacS/gacA shows huge influence on biocontrol phenotype, whereas, in pathogenic bacteria, gacS/ gacA shows huge influence over virulence. One of the factor of gacS/gacA regulatory system that has different influence on variety of specie different is the capacity for this system to regulate parts of the accessory genome, such as secondary metabolite biosynthesis gene clusters in P. stutzeri A1501 (Yan 2008) which are not conserved across bacterial species or strains and can dictate the ecological functions of bacteria within specific environments. The capacity for the gacS/ gacA system, which is conserved within the core genome of many bacterial species, to control such dynamic parts of bacterial genomes is intriguing and demonstrates the remarkable versatility of the gacS/gacA system across numerous bacteria. This data will help us uncover important insight of gacA presence in the prokaryotic system.
description
Gram-negative soil bacterium proteobacteria
env_broad_scale
soil, rice roots
env_local_scale
Gram-negative soil bacterium
env_medium
China
geo_loc_name
rhizosphere competence traits in the genome of root-associated Pseudomonas stutzeri A1501.
host
minimal lactate medium at 30CC
isol_growth_condt
35.0000 N 103.0000 E
lat_lon
03
num_replicons
Stutzerimonas stutzeri A1501
http://purl.obolibrary.org/obo/NCBITaxon_379731
organism
Nitrogen fixation island and rhizosphere competence traits in the genome of root-associated Pseudomonas stutzeri A1501., Proc Natl Acad Sci U S A, 2008 May 27;105(21):7564-9
ref_biomaterial
A1501
strain
MIGS Cultured Bacterial/Archaeal sample from Pseudomonas stutzeri
title