SAMN22566482
External Id
ICAR-National Institute for Plant Biotechnology
INSDC center name
2022-12-25T00:50:53.513Z
INSDC first public
2022-12-25T00:50:53.513Z
INSDC last update
SRS10747516
INSDC secondary accession
live
INSDC status
Plant
NCBI submission model
Plant.1.0
NCBI submission package
SRS10747516
SRA accession
20 days old seedlings
age
Rice (cv. TN1) treated with Gluconacetobacter diazotrophicus PAL5 (NTG-R1)
aliquote
ICAR-National Institute for Plant Biotechnology
biomaterial_provider
Dr. P. K. Mandal
collected_by
2020-02
collection_date
TN1
cultivar
Transriptomic Based Molecular Response of Rice (cv. TN1) treated with Gluconacetobacter diazotrophicus PAL5 at 240 HRS Post Inoculation (R1 - Replication 1)
description
Seedling stage
dev_stage
India: New Delhi
geo_loc_name
Germinated rice seedlings (cv. TN1) were aseptically grown (5 days) in a hydroponics assembly with Hoagland’s (N+) medium at a temperature of 28 °C and a photoperiod of 16 h. The growth medium was replaced with nitrogen-free Hoagland’s medium and after acclimatization of the seedlings for 5 days, Gluconacetobacter diazotrophicus bacterial culture was inoculated (1 x 106 CFU/ml). Following co-cultivation of rice seedlings and bacteria for 10 days (240 hours post-inoculation), rice root tissue samples were harvested for RNA extraction and subsequent dual transcriptome analysis.
growth_protocol
Oryza sativa
http://purl.obolibrary.org/obo/NCBITaxon_4530
organism
Plant sample
sample_type
28 °C
temp
Root
tissue
Transcriptomic Profiling of Rice (cv. TN1) treated with Gluconacetobacter diazotrophicus PAL5 at 240 HRS Post Inoculation (R1 - Replication 1)
title
Rice (cv. TN1) treated with Gluconacetobacter diazotrophicus PAL5 (NTG-R1) at 240 HRS Post Inoculation
treatment