SAMN21365228
External Id
Lanzhou University
INSDC center name
2022-12-31T00:51:49.567Z
INSDC first public
2022-12-31T00:51:49.567Z
INSDC last update
SRS10101611
INSDC secondary accession
live
INSDC status
MIMS.me
NCBI submission model
MIGS/MIMS/MIMARKS.host-associated
NCBI submission model
MIMS.me.host-associated.5.0
NCBI submission package
SRS10101611
SRA accession
DSS
chem_administration
2019-03
collection_date
The bacterial DNA from the fecal contents was extracted with the QIAamp DNA Stool Mini Kit (QIAGEN, Germany), and was used for the gut microbial analysis through the Illumina MiSeq Sequencing platform
description
Fecal sample collected from the mice gu fro gut microbiome analysis
env_broad_scale
Host factors (age, genotype, DSS sensitivity) and environmental factors (diet, housing condations, handling)
env_local_scale
lab
env_medium
China: Gansu
geo_loc_name
Mice
host
Adult
host_age
black
host_color
Normal chow
host_diet
DSS induced colitis (IBD model)
host_disease
C57BL/6 mice
host_genotype
Normal laboratory conditions
host_growth_cond
7-8 weeks
host_life_stage
black colour
host_phenotype
female
host_sex
gut fecal samples
host_tissue_sampled
gut
isolation_source
mouse gut metagenome
http://purl.obolibrary.org/obo/NCBITaxon_410661
organism
yes
perturbation
swab
samp_collect_device
RNA-Seq-16s via illumina
samp_mat_process
222
samp_size
1 -2 week
samp_store_dur
deep freezer
samp_store_loc
-80
samp_store_temp
Mice fecal
title