ERC000052
ENA-CHECKLIST
2022-08-02
ENA-FIRST-PUBLIC
2022-08-02
ENA-LAST-UPDATE
SAMEA7025283
External Id
UNIVERSITY OF COPENHAGEN
INSDC center alias
UNIVERSITY OF COPENHAGEN
INSDC center name
2022-08-02T16:46:14Z
INSDC first public
2022-08-02T16:46:14Z
INSDC last update
public
INSDC status
Gallus gallus
Organism
ERS4789493
SRA accession
CC19_18F1a_metaG
Submitter Id
AAGTCGGAGGCCAAGCGGTCTTAGGAAGACAA;GAACGACATGGCTACGATCCGACTT
adapters
2019-10-16
collection date
chicken MAG catalogue data from Caecum content; animal CC19.18 from cage CC19 with treatment CC
description
Spain
geographic location (country and/or sea)
41.170047
DD
geographic location (latitude)
1.168491
DD
geographic location (longitude)
El Morell; Tarragona
geographic location (region and locality)
Caecum content
host body site
Ross
host breed
Chicken
host common name
Control
host diet treatment
Gallus gallus
host scientific name
male
host sex
21
°C
host storage container temperature
CC19.18
host subject id
9031
host taxid
2046.00
g
host total mass
D-rex protocol
nucleic acid extraction
chicken gut metagenome
http://purl.obolibrary.org/obo/NCBITaxon_506600
organism
HoloFood
project
HoloFood Chicken - MAG Catalogue from Caecum content
project name
GCA_000000000.0
reference host genome for decontamination
Shield
sample storage buffer
E-matrix 2ml
sample storage container
UCPH
sample storage location
-20
°C
sample storage temperature
0.2
mL
sample volume or weight for DNA extraction
MGISEQ-2000
sequencing method
CC19.18F1a
title
35
day
trial length
35
day
trial timepoint