SAMN05414134
External Id
University of Maryland
INSDC center name
2018-01-01T00:00:00Z
INSDC first public
2022-03-15T21:05:28.319Z
INSDC last update
SRS1609003
INSDC secondary accession
live
INSDC status
Pathogen.env
NCBI submission model
Pathogen.env.1.0
NCBI submission package
SRS1609003
SRA accession
Shunyuan Xiao
collected by
2013
collection date
Powdery mildew (PM) is one of the most important and widespread plant diseases caused by obligate biotrophic Ascomycete fungi in the order of Erysiphales. Monocot PM fungi such as Blumeria graminis f.sp. hordei (Bgh) infectious on barley and B. graminis f.sp. tritici (Bgt) infectious on wheat exhibit high-level of host-specialization. By contrast, many dicot PM fungi display rather broad host ranges. To understand why different PM fungi adopt distinct modes of host-adaption, we sequenced the genomes of four dicot PM strains belonging to Golovinomyces cichoracearum (GcC1, GcM1, GcM3) or Oidium neolycopersici (OnM2) and conducted comparative sequence analyses. This bioproject included the sequencing and assembly information of Oidium neolycopersici UMSG2 (OnM2) which is found on tomato plants grown on the Shady Grove campus of University of Maryland. The genome sequence was sequenced at 55X coverage using an Illumina shotgun sequncing approach. The estimated genome size is 120 Mb.
description
USA: Rockville, Maryland
geo loc name
UMSG2
isolate
greenhouse-grown tomato plants on the Shady Grove campus of University of Maryland
isolation source
39.084 N 77.1528 W
lat lon
Solanum lycopersicum cv. Moneymaker
nat_host
Erysiphe neolycopersici
http://purl.obolibrary.org/obo/NCBITaxon_212602
organism
Oidium neolycopersici UMSG2 (Tomato powdery mildew)
title