SAMN04226091
External Id
United States Geological Survey
INSDC center name
2022-03-16T00:00:00Z
INSDC first public
2022-03-25T22:06:46.570Z
INSDC last update
SRS12382432
INSDC secondary accession
live
INSDC status
MIMARKS.specimen
NCBI submission model
MIGS/MIMS/MIMARKS.host-associated
NCBI submission model
MIMARKS.specimen.host-associated.6.0
NCBI submission package
SRS12382432
SRA accession
2013
collection date
474 m
depth
Keywords: GSC:MIxS;MIMARKS:6.0
description
marine
env biome
deep sea
env feature
Coral tissue
env_material
Atlantic Ocean: Norfolk Canyon
geo loc name
Anthothela sp.
host
37.023429 N 74.592413 W
lat lon
doi:10.1093/nar/gkq873
nucl_acid_amp
doi:10.1371/journal.pone.0009554
nucl_acid_ext
coral metagenome
http://purl.obolibrary.org/obo/NCBITaxon_496922
organism
FWD: 5_ AYTGGGYDTAAAGNG, REV:5_ CGTATCGCCTCCCTCGCGCCATCAG
pcr primers
16S amplicons from cold water coral microbiomes of Anthothela grandiflora, Anthothela spp. and unknown genus
project name
Preserved using RNAlater overnight at 4 째C before extended storage in -20 째C
samp mat process
Remotely-operated vehicle (ROV)
samp_collect_device
~ 50 mg
samp_size
-20 째C
samp_store_temp
GS FLX 454 pyrosequencing
seq meth
http://dx.doi.org/10.5066/F7CZ356K
sop
Coral tissue
source_material_id
16S rRNA
target gene
V4-V5
http://www.ebi.ac.uk/efo/EFO_0002098
target subfragment
6.5 째C
temp
ROV.2013.RB.688.Q2
title