characteristics.text: SAMD00083043
characteristics.characteristic: External Id
characteristics.text: Genomic breeding group, Research Center for Aquatic Breeding, National Research Institute of aquaculture, FRA
characteristics.characteristic: INSDC center name
characteristics.text: 2017-08-04T00:00:00Z
characteristics.characteristic: INSDC first public
characteristics.text: 2022-04-05T05:00:03Z
characteristics.characteristic: INSDC last update
characteristics.text: live
characteristics.characteristic: INSDC status
characteristics.text: MIGS.eu
characteristics.characteristic: NCBI submission model
characteristics.text: MIGS.eu.6.0
characteristics.characteristic: NCBI submission package
characteristics.text: three years old
characteristics.characteristic: age
characteristics.text: Komame station, National Research Institute of Aquaculture
characteristics.characteristic: biomaterial provider
characteristics.text: 2014-06
characteristics.characteristic: collection date
characteristics.text: Greater amberjack is widely distributed in tropical and temperate waters of whole world and important aquaculture fish in Japan. For functional gene identification for biological traits and breeding yellowtail by marker-assisted selection (MAS) or gene-assisted selection (GAS), we carried out whole genome de novo sequencing using Hiseq2500 and PacBio RSII to constructed genome reference sequences of greater amberjack and map parallel re-sequence of greater amberjack on the reference sequence for SNP detection. We gaihered sperms from one healthy three-yera-old male breeded in marine fish pen.
characteristics.characteristic: description
characteristics.text: ocean
characteristics.characteristic: env_broad_scale
characteristics.text: bay
characteristics.ontologyTerms: http://www.ebi.ac.uk/efo/EFO_0005175
characteristics.characteristic: env_local_scale
characteristics.text: water
characteristics.ontologyTerms: http://purl.obolibrary.org/obo/CHEBI_15377
characteristics.characteristic: env_medium
characteristics.text: 650000000bp
characteristics.characteristic: estimated size
characteristics.text: Japan:Kochi, Yawata-gun
characteristics.characteristic: geo loc name
characteristics.text: 32.47 N 132.41 E
characteristics.characteristic: lat lon
characteristics.text: Amj
characteristics.characteristic: locus_tag_prefix
characteristics.text: 24
characteristics.characteristic: num_replicons
characteristics.text: Seriola dumerili
characteristics.ontologyTerms: http://purl.obolibrary.org/obo/NCBITaxon_41447
characteristics.characteristic: organism
characteristics.text: diploid
characteristics.ontologyTerms: http://purl.obolibrary.org/obo/CL_0000415
characteristics.characteristic: ploidy
characteristics.text: Greater amberjack (Seriola dumerili) whole genome de novo sequence
characteristics.characteristic: project name
characteristics.text: sexual
characteristics.characteristic: propagation
characteristics.text: Sdu_G_001
characteristics.characteristic: sample name
characteristics.text: male
characteristics.ontologyTerms: http://purl.obolibrary.org/obo/PATO_0000384
characteristics.characteristic: sex
characteristics.text: sperm
characteristics.ontologyTerms: http://purl.obolibrary.org/obo/CL_0000019
characteristics.characteristic: tissue type
characteristics.text: Greater amberjack
characteristics.characteristic: title