characteristics.text: SAMN16931595
characteristics.characteristic: External Id
characteristics.text: Institute of Pathogen Biology, CAMS & PUMC
characteristics.characteristic: INSDC center name
characteristics.text: 2022-01-19T00:00:00Z
characteristics.characteristic: INSDC first public
characteristics.text: 2022-01-19T03:04:01.654Z
characteristics.characteristic: INSDC last update
characteristics.text: SRS7943036
characteristics.characteristic: INSDC secondary accession
characteristics.text: live
characteristics.characteristic: INSDC status
characteristics.text: Model organism or animal
characteristics.characteristic: NCBI submission model
characteristics.text: Model.organism.animal.1.0
characteristics.characteristic: NCBI submission package
characteristics.text: SRS7943036
characteristics.characteristic: SRA accession
characteristics.text: 12 weeks
characteristics.ontologyTerms: http://purl.obolibrary.org/obo/UO_0000034
characteristics.characteristic: age
characteristics.text: 4-week-old Apc (Min716/+) transgenic mice were orally inoculated with vehicle control (VC) and euthanized at 12 weeks old. Upon sacrifice, colon tumors were derived, and genomic DNA was isolated using NucleoSpin Tissue Kit (Macherey-Nagel). Illumina DNA libraries with mouse exome capture were prepared using SureSelect Mouse All Exon Kit (Agilent), and sequenced using an Illumina NovaSeq6000 S4 System with 200x base coverage.
characteristics.characteristic: description
characteristics.text: colon cancer
characteristics.ontologyTerms: http://www.ebi.ac.uk/efo/EFO_0000365
characteristics.characteristic: disease
characteristics.text: Apc (Min716/+)
characteristics.characteristic: genotype
characteristics.text: Mus musculus
characteristics.ontologyTerms: http://purl.obolibrary.org/obo/NCBITaxon_10090
characteristics.characteristic: organism
characteristics.text: 10
characteristics.characteristic: sample number
characteristics.text: mouse tumor genomic DNA exome capture
characteristics.characteristic: sample type
characteristics.text: male
characteristics.ontologyTerms: http://purl.obolibrary.org/obo/PATO_0000384
characteristics.characteristic: sex
characteristics.text: C57BL/6 background
characteristics.ontologyTerms: http://www.ebi.ac.uk/efo/EFO_0000601
characteristics.characteristic: strain
characteristics.text: colon tumor
characteristics.ontologyTerms: http://purl.obolibrary.org/obo/MONDO_0021063
characteristics.characteristic: tissue
characteristics.text: Whole exome sequencing of colon tumors derived from Apc (Min716/+) transgenic mice (n=10)
characteristics.characteristic: title