characteristics.text: SAMN29861939
characteristics.characteristic: External Id
characteristics.text: INAIL-DIT, Research Area
characteristics.characteristic: INSDC center name
characteristics.text: 2022-07-21T00:00:00Z
characteristics.characteristic: INSDC first public
characteristics.text: 2023-03-30T11:22:18.677Z
characteristics.characteristic: INSDC last update
characteristics.text: SRS17180021
characteristics.characteristic: INSDC secondary accession
characteristics.text: live
characteristics.characteristic: INSDC status
characteristics.text: MIGS.ba
characteristics.characteristic: NCBI submission model
characteristics.text: MIGS/MIMS/MIMARKS.sediment
characteristics.characteristic: NCBI submission model
characteristics.text: MIGS.ba.sediment.6.0
characteristics.characteristic: NCBI submission package
characteristics.text: SRS17180021
characteristics.characteristic: SRA accession
characteristics.text: 2021-05-26
characteristics.characteristic: collection_date
characteristics.text: 1-5 cm
characteristics.characteristic: depth
characteristics.text: A deep understanding of halotolerant/halophilic bacteria with the ability to degrade polymers has broad relevance to biotechnological sectors, including marine biomass conversion and plastic biodegradation. Here, we investigated a carotenoid-pigmented and halotolerant bacterium, Echinicola sp. strain H1, isolated from the hepatopancreas of Tylos ponticus (associated with beached leaves of the seagrass Posidonia oceanica). We report the draft genome sequence of Echinicola sp. H1 obtained with Illumina platform. The genome was assembled de novo and was used to functionally annotate Echinicola sp. H1. This genome sequence provided essential information for future transcriptomic studies, particularly under salt stress conditions.
characteristics.characteristic: description
characteristics.text: 0
characteristics.characteristic: elev
characteristics.text: hepatopancreas of Tylos ponticus (Crustacea, Isopoda)
characteristics.characteristic: env_broad_scale
characteristics.text: hepatopancreas of Tylos ponticus
characteristics.characteristic: env_local_scale
characteristics.text: hepatopancreas from Tylos ponticus
characteristics.characteristic: env_medium
characteristics.text: Italy: Sant Agostino, Civitavecchia
characteristics.characteristic: geo_loc_name
characteristics.text: NA +NaCl
characteristics.characteristic: isol_growth_condt
characteristics.text: hepatopancreas of Tylos ponticus
characteristics.characteristic: isolation_source
characteristics.text: 42.159167 N 11.734444 E
characteristics.characteristic: lat_lon
characteristics.text: 1
characteristics.characteristic: num_replicons
characteristics.text: Echinicola sp. H1
characteristics.ontologyTerms: http://purl.obolibrary.org/obo/NCBITaxon_2968824
characteristics.characteristic: organism
characteristics.text: no reference
characteristics.characteristic: ref_biomaterial
characteristics.text: H1
characteristics.characteristic: strain
characteristics.text: Genome sequencing and assembly of Echinicola sp. H1 (Bacteroidetes) with a high biotech potential.
characteristics.characteristic: title