characteristics.text: SAMN33770631
characteristics.characteristic: External Id
characteristics.text: Julius Kuhn Institut
characteristics.characteristic: INSDC center name
characteristics.text: 2023-04-15T00:50:22.627Z
characteristics.characteristic: INSDC first public
characteristics.text: 2023-04-15T00:50:22.627Z
characteristics.characteristic: INSDC last update
characteristics.text: SRS17051623
characteristics.characteristic: INSDC secondary accession
characteristics.text: live
characteristics.characteristic: INSDC status
characteristics.text: MIMARKS.survey
characteristics.characteristic: NCBI submission model
characteristics.text: MIGS/MIMS/MIMARKS.soil
characteristics.characteristic: NCBI submission model
characteristics.text: MIMARKS.survey.soil.6.0
characteristics.characteristic: NCBI submission package
characteristics.text: biological replicate 5
characteristics.characteristic: Replicate
characteristics.text: SRS17051623
characteristics.characteristic: SRA accession
characteristics.text: faltante
characteristics.characteristic: agrochem_addition
characteristics.text: No colectado
characteristics.characteristic: al_sat
characteristics.text: Annual mean: 1379 ± 58 mm (no seasonality within the year)
characteristics.characteristic: annual_season_precpt
characteristics.text: Annual Mean maximum: 23.0 ± 0.1°C, annual mean minimum: 11.3 ± 0.6 °C (January (warmest): 23.0 ± 0.5°C/ July (coldest): 10.9 ± 0.9 °C)
characteristics.characteristic: annual_season_temp
characteristics.text: 2018
characteristics.characteristic: collection_date
characteristics.text: Avena sativa L./Sorghum bicolor L./ Triticum aestivum L./Glycine max L.
characteristics.characteristic: crop_rotation
characteristics.text: small grains
characteristics.characteristic: cur_land_use
characteristics.text: oat
characteristics.characteristic: cur_vegetation
characteristics.text: Continuous cropping, Rhizosphere, replicate V
characteristics.characteristic: description
characteristics.text: 0.5g
characteristics.characteristic: dna_extraction_amount
characteristics.text: FastDNA SPIN kit for soil
characteristics.characteristic: dna_extraction_method
characteristics.text: poorly
characteristics.characteristic: drainage_class
characteristics.text: 57 m
characteristics.characteristic: elev
characteristics.text: Organism
characteristics.characteristic: env_broad_scale
characteristics.text: Organism
characteristics.characteristic: env_local_scale
characteristics.text: Rhizosphere
characteristics.characteristic: env_medium
characteristics.text: No colectado
characteristics.characteristic: extreme_event
characteristics.text: No colectado
characteristics.characteristic: extreme_salinity
characteristics.text: Typic Argiudolls
characteristics.characteristic: fao_class
characteristics.text: No colectado
characteristics.characteristic: fire
characteristics.text: No colectado
characteristics.characteristic: flooding
characteristics.text: Uruguay
characteristics.characteristic: geo_loc_name
characteristics.text: No colectado
characteristics.characteristic: heavy_metals
characteristics.text: No colectado
characteristics.characteristic: heavy_metals_meth
characteristics.text: A horizon
characteristics.characteristic: horizon
characteristics.text: faltante
characteristics.characteristic: horizon_meth
characteristics.text: Oat
characteristics.characteristic: host_common_name
characteristics.text: Avena sativa L.
characteristics.characteristic: host_latin_name
characteristics.text: 33.15544 S 54.29281 W
characteristics.characteristic: lat_lon
characteristics.text: http://www.inia.uy/gras/Clima/Banco-datos-agroclimatico
characteristics.characteristic: link_climate_info
characteristics.text: No colectado
characteristics.characteristic: microbial_biomass
characteristics.text: metagenome
characteristics.ontologyTerms: http://purl.obolibrary.org/obo/NCBITaxon_256318
characteristics.characteristic: organism
characteristics.text: No
characteristics.characteristic: pool_dna_extracts
characteristics.text: Natural grasslands (before 1995)
characteristics.characteristic: previous_land_use
characteristics.text: Faltante
characteristics.characteristic: previous_land_use_meth
characteristics.text: Roots of three oat plants per replicate were briefly washed with distilled water to remove loosely adhering soil and pooled to a composite sample. Rhizosphere was recovered from 5 g of roots by Stomacher treatment followed by centrifugation according to Schreiter et al. (2014). Rhizosphere pellets were stored at −20◦C until TC-DNA extraction.
characteristics.characteristic: samp_mat_process
characteristics.text: 5g
characteristics.characteristic: samp_size
characteristics.text: Illumina MiSeq
characteristics.characteristic: sequencing_platform
characteristics.text: stored at -20°C, extraction 5 moths later
characteristics.characteristic: store_cond
characteristics.text: Faltante
characteristics.characteristic: texture_meth
characteristics.text: MIMARKS Survey related sample from metagenome
characteristics.characteristic: title