SAMN35343409
External Id
SARS-CoV-2/Human/USA/OR-CDC-LC1042561/2023
External Id
CDC-OAMD
INSDC center name
2023-05-24T00:00:00Z
INSDC first public
2023-05-24T04:11:33.990Z
INSDC last update
SRS17805018
INSDC secondary accession
live
INSDC status
SARS-CoV-2/Human/USA/OR-CDC-LC1042561/2023
Isolate
SARS-CoV-2: clinical or host-associated
NCBI submission model
SARS-CoV-2.cl.1.0
NCBI submission package
SRS17805018
SRA accession
Laboratory Corporation of America
collected_by
2023-05-08
collection_date
Nasal Swabs
collection_device
Nasal Swabs
collection_method
N1 gene
diagnostic_gene_name_1
N2 gene
diagnostic_gene_name_2
RP gene
diagnostic_gene_name_3
24.124
diagnostic_pcr_Ct_value_1
22.107
diagnostic_pcr_Ct_value_2
36.009
diagnostic_pcr_Ct_value_3
Labcorp LDT
diagnostic_pcr_protocol_1
Labcorp LDT
diagnostic_pcr_protocol_2
Labcorp LDT
diagnostic_pcr_protocol_3
USA: Oregon
geo_loc_name
Homo sapiens
host
38
host_age
COVID-19
host_disease
female
host_sex
Nasal Swabs
isolation_source
XBB.1.5.20
lineage/clade name
Severe acute respiratory syndrome coronavirus 2
http://purl.obolibrary.org/obo/NCBITaxon_2697049
organism
baseline surveillance (random sampling)
purpose_of_sequencing
CDC Sars CoV2 Sequencing Baseline Constellation
title