SAMN35303275
External Id
The Aga Khan University
INSDC center name
2023-05-22T00:00:00Z
INSDC first public
2023-05-23T04:40:20.407Z
INSDC last update
SRS17784570
INSDC secondary accession
live
INSDC status
SARS-CoV-2: clinical or host-associated
NCBI submission model
SARS-CoV-2.cl.1.0
NCBI submission package
Original
Passage details/history
Alive: Fever, Tiredness, Sore Throat, Headache, Aches and Pains
Patient status
SRS17784570
SRA accession
Non-sentinel-surveillance (hospital)
Sampling Strategy
betacoronavirus
Type
Clinical Lab, Aga Khan University Hospital
collected_by
2023-03-23
collection_date
Sterile Dacron Swab
collection_device
2021-06-09
date_of_sars_cov_2_vaccination
Shopping Mall
exposure_event
Pakistan: Karachi
geo_loc_name
hCoV-19/Pakistan/IDRL-AKU-KHI-2531-S8/2023
gisaid_virus_name
Homo sapiens
host
56
host_age
nasopharynx
host_anatomical_part
COVID-19
host_disease
female
host_sex
2531
isolate
nasal swab
isolation_source
Severe acute respiratory syndrome coronavirus 2
http://purl.obolibrary.org/obo/NCBITaxon_2697049
organism
no
prior_sars_cov_2_antiviral_treat
Diagnostic testing
purpose_of_sampling
baseline surveillance (random sampling)
purpose_of_sequencing
Infectious Diseases Research Laboratory, Department of Pediatrics and Child Health, Faculty of Health Sciences, Medical College, The Aga Khan University, Stadium Road, Karachi-74800, Pakistan
sequenced_by
SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2
title
Sinopharm
vaccine_received