SAMN35683085
External Id
University of Girona
INSDC center name
2023-06-09T00:00:00Z
INSDC first public
2023-06-09T08:01:03.130Z
INSDC last update
SRS17943274
INSDC secondary accession
live
INSDC status
Metagenome or environmental
NCBI submission model
Metagenome.environmental.1.0
NCBI submission package
SRS17943274
SRA accession
2022-10-21
collection_date
V4 of 16S rRNA gene. Primers 515F-806R Dual indexed Illumina compatible libraries produced in a single step. Primary PCR performed using fusion primers Fluidigm CS oligos at their 5' ends. The genomic DNA samples were sequenced using a Illumina MiSeq flow cell (v2) and a 500 cycle reagent kit (2 x 250 bp paired end reads).
design_description
LC01_S124_L001_R1_001.fastq
filename
LC01_S124_L001_R2_001.fastq
filename2
fastq
filetype
Spain: Girona
geo_loc_name
Illumina MiSeq
instrument_model
Clostridial consortia
isolation_source
41.58 N 2.49 E
lat_lon
LC01
library_id
paired
library_layout
PCR
library_selection
METAGENOMIC
library_source
AMPLICON
library_strategy
metagenome
http://purl.obolibrary.org/obo/NCBITaxon_256318
organism
ILLUMINA
platform
Metagenome or environmental sample from metagenome
title
Consortium sequences
title