SAMN24010452
External Id
ALAMEDA COUNTY DEPARTMENT OF PUBLIC HEALTH
INSDC center name
2021-12-13T00:00:00Z
INSDC first public
2023-06-23T22:34:28.010Z
INSDC last update
SRS18053919
INSDC secondary accession
live
INSDC status
Pathogen.cl
NCBI submission model
Pathogen.cl.1.0
NCBI submission package
SRS18053919
SRA accession
R
amoxicillin_clavulinc_acid
R
ampicillin
R
ampicillin sulbactam
Kirby-Bauer
ast_method
no
carbapenemase
R
cefazolin
R
cefepime
R
cefotaxime
R
ceftazidime
R
ceftriaxone
Hospital
collected by
Carbapenem resistant Enterobacteriales
description
R
ertapenem
SHV-12
esbl
Yes
esbl_only
USA: California
geo loc name
Homo sapiens
http://purl.obolibrary.org/obo/NCBITaxon_9606
host
not collected
host disease
2
i_r_mic_(g/ml)
I
http://www.ebi.ac.uk/efo/EFO_0006746
i_r_susceptibility
R
imipenem
Rectal
http://purl.obolibrary.org/obo/UBERON_0000916
isolation source
not collected
lat lon
Negative
http://purl.obolibrary.org/obo/CL_0002371
mcim_result
R
meropenem
Klebsiella pneumoniae
http://purl.obolibrary.org/obo/NCBITaxon_573
organism
TEM-1
http://purl.obolibrary.org/obo/CL_0000625
other__lactamase
Nutrient agar or blood agar slants received from clinical lab. Sequencing performed directly from clinical slant. One passage to nutrient broth for Susceptibility testing.
passage_history
ST-13
strain
R
tazobactam
Pathogen: clinical or host-associated sample from Klebsiella pneumoniae
title