SAMN24010453
External Id
ALAMEDA COUNTY DEPARTMENT OF PUBLIC HEALTH
INSDC center name
2021-12-13T00:00:00Z
INSDC first public
2023-06-23T22:34:26.297Z
INSDC last update
SRS18053917
INSDC secondary accession
live
INSDC status
Pathogen.cl
NCBI submission model
Pathogen.cl.1.0
NCBI submission package
SRS18053917
SRA accession
R
amoxicillin_clavulinc_acid
R
ampicillin
R
ampicillin sulbactam
Not Reported
ast_method
no
carbapenemase
R
cefepime
R
cefotaxime
R
ceftazidime
R
ceftriaxone
Hospital
collected by
Carbapenem resistant Enterobacteriales
description
R
ertapenem
SHV-1
esbl
Yes
esbl_only
USA: California
geo loc name
Homo sapiens
http://purl.obolibrary.org/obo/NCBITaxon_9606
host
not collected
host disease
4
i_r_mic_(g/ml)
R
i_r_susceptibility
R
imipenem
Rectal
http://purl.obolibrary.org/obo/UBERON_0000916
isolation source
not collected
lat lon
Negative
http://purl.obolibrary.org/obo/CL_0002371
mcim_result
R
meropenem
Klebsiella pneumoniae
http://purl.obolibrary.org/obo/NCBITaxon_573
organism
CMY-2
other__lactamase
Nutrient agar or blood agar slants received from clinical lab. Sequencing performed directly from clinical slant. One passage to nutrient broth for Susceptibility testing.
passage_history
ST-45
strain
R
tazobactam
Pathogen: clinical or host-associated sample from Klebsiella pneumoniae
title