SAMN35821723
External Id
University of Wisconsin-Madison
INSDC center name
2023-06-21T00:00:00Z
INSDC first public
2023-06-23T20:28:27.683Z
INSDC last update
SRS18052083
INSDC secondary accession
live
INSDC status
Metagenome or environmental
NCBI submission model
Metagenome.environmental.1.0
NCBI submission package
SRS18052083
SRA accession
2021-11-01
collection_date
Day 18
days_since _incubation
ITS2 sequences from soil-PyOM lab incubation conducted with soil collected from fire affected sites in the mixed conifer El Dorado National Forest in California
description
USA: El Dorado National Forest
geo_loc_name
soil
isolation_source
38.86953 N 120.61322 W
lat_lon
soil metagenome
http://purl.obolibrary.org/obo/NCBITaxon_410658
organism
350
pyom_temp_group
350-T4-SB
replicate_group
4
replicate_number
Topsoil (0-0.1 m) was collected after removing the O-horizon litter layer; stored at -20 °C until it was shipped to Madison, WI on dry ice; stored at -20 °C until the start of the incubation
samp_mat_process
250 mg
samp_size
350 PyOM amended soil
sample_type
Illumina MiSeq 2x300 PE
sequencing_method
rRNA gene operon
target_gene
ITS2
target_subfragment
Metagenome or environmental sample from soil metagenome
title