SAMN35061666
External Id
Salk
INSDC center name
2023-06-30T00:53:36.143Z
INSDC first public
2023-06-30T00:53:36.143Z
INSDC last update
SRS17636398
INSDC secondary accession
live
INSDC status
L001-647
LIBRARY_ID_ml
Model organism or animal
NCBI submission model
Model.organism.animal.1.0
NCBI submission package
SRS17636398
SRA accession
0
SRE
115.5990739
SRE_change_N50
not collected
age
1450
aliquot_time
Michael lab at Salk
biomaterial_provider
not collected
birth_date
Pacific ocean
birth_location
not applicable
breed
not applicable
breeding_history
wild fish
breeding_method
not applicable
cell_line
whole blood
cell_subtype
blood
cell_type
JJM Salk
collected_by
2022-07-09
collection_date
1200
collection_time
not applicable
cultivar
not applicable
culture_collection
7-Sep-22
death_date
Kazu_090722_95etoh_4C_3w
description
not collected
dev_stage
not applicable
disease
not applicable
disease_stage
not applicable
ecotype
fish
experiment
28-Sep-22
extraction_date
40.1
femto_100k_1M
12.7
femto_10k_25k
2.6
femto_1_10k
101.3
femto_1_1M
33.1
femto_25k_50k
13.2
femto_50k_100k
53.3
femto_50k_1M
0.6852
femto_conc
2022-11-07b
femto_date
160355
femto_mean_bp
28
fish_FL_cm
32
fish_TL_cm
519.7
fish_mass_g
fish_3
fish_number
1
fish_order
not applicable
genotype
USA: San Diego, CA
geo_loc_name
wild caught
growth_protocol
not applicable
health_state
Kazu090722
isolate
not applicable
isolation_source
32.75811 N 117.2449 W
lat_lon
32.75811
latitute
MB quivira jetty south
location
-117.2449
longitude
10366
nanoplot_N50
10.4
nanoplot_N50_kb
2327.1
nanoplot_mean_RL
15.6
nanoplot_mean_RQ
176352856
nanoplot_total_bases
176.4
nanoplot_total_bases_Mb
75782
nanoplot_total_reads
2.28
nd_260230_b
2.23
nd_260230_m
2.26
nd_260230_mean
2.27
nd_260230_t
1.82
nd_260280_b
1.82
nd_260280_m
1.826666667
nd_260280_mean
1.84
nd_260280_t
826
nd_conc_b
740
nd_conc_m
690
nd_conc_mean
504
nd_conc_t
24.16251078
nd_cv
4-Oct-22
nd_date
6
nd_days
1
nd_success
Kyphosus azureus
http://purl.obolibrary.org/obo/NCBITaxon_2838349
organism
not applicable
phenotype
20.53024439
q_cv
10/14/22
q_date
16
q_days
89.46666667
q_total_ug
1100
qbr_conc_b
838
qbr_conc_m
894.6666667
qbr_conc_mean
746
qbr_conc_t
whole blood
sample_type
0
seq_deep
1
seq_shallow
R000469
sequencing_run
not collected
sex
SIO:23-58
specimen_voucher
SIO: 23-58
specimen_voucher_2
95etoh
storage_buffer
95etoh_4C
storage_buffer_temp
4
storage_temperature_C
21
storage_time_days
3
storage_time_weeks
3w
storage_time_weeks_st
minus 80 C
store_cond
not applicable
strain
not applicable
stud_book_number
5
time_before_EDTA_min
2 hr 45 min
time_in_EDTA_on_ince_min
whole blood
tissue
storage study
title
95etoh_4C_3w_SRE0
treatment
35
tube_number
3
tube_number