SAMN35061602
External Id
Salk
INSDC center name
2023-06-30T00:53:35.820Z
INSDC first public
2023-06-30T00:53:35.820Z
INSDC last update
SRS17636281
INSDC secondary accession
live
INSDC status
L001-664
LIBRARY_ID_ml
Model organism or animal
NCBI submission model
Model.organism.animal.1.0
NCBI submission package
SRS17636281
SRA accession
0
SRE
78.81861044
SRE_change_N50
not collected
age
1530
aliquot_time
Michael lab at Salk
biomaterial_provider
not collected
birth_date
Pacific ocean
birth_location
not applicable
breed
not applicable
breeding_history
wild fish
breeding_method
not applicable
cell_line
whole blood
cell_subtype
blood
cell_type
JJM Salk
collected_by
2022-09-09
collection_date
1200
collection_time
not applicable
cultivar
not applicable
culture_collection
9-Sep-22
death_date
Ejac_090922_95etoh_4C_1w
description
not collected
dev_stage
not applicable
disease
not applicable
disease_stage
not applicable
ecotype
fish
experiment
16-Sep-22
extraction_date
37.8
femto_100k_1M
16.1
femto_10k_25k
4
femto_1_10k
100.1
femto_1_1M
35.3
femto_25k_50k
7.2
femto_50k_100k
45
femto_50k_1M
8.1841
femto_conc
2022-11-07a
femto_date
160634
femto_mean_bp
20.1
fish_FL_cm
20.3
fish_TL_cm
214.5
fish_mass_g
fish_5
fish_number
3
fish_order
not applicable
genotype
USA: San Diego, CA
geo_loc_name
wild caught
growth_protocol
not applicable
health_state
Ejac090922
isolate
not applicable
isolation_source
32.76044 N 117.2454 W
lat_lon
32.76044
latitute
MB jetty North
location
-117.2454
longitude
22482
nanoplot_N50
22.5
nanoplot_N50_kb
7771.4
nanoplot_mean_RL
17.1
nanoplot_mean_RQ
25334870
nanoplot_total_bases
25.3
nanoplot_total_bases_Mb
3260
nanoplot_total_reads
2.28
nd_260230_b
2.31
nd_260230_m
2.303333333
nd_260230_mean
2.32
nd_260230_t
1.85
nd_260280_b
1.85
nd_260280_m
1.853333333
nd_260280_mean
1.86
nd_260280_t
511
nd_conc_b
469
nd_conc_m
453.3333333
nd_conc_mean
380
nd_conc_t
14.75524803
nd_cv
5-Oct-22
nd_date
19
nd_days
1
nd_success
Embiotoca jacksoni
http://purl.obolibrary.org/obo/NCBITaxon_100190
organism
not applicable
phenotype
11.54046249
q_cv
10/14/22
q_date
28
q_days
53.73333333
q_total_ug
608
qbr_conc_b
492
qbr_conc_m
537.3333333
qbr_conc_mean
512
qbr_conc_t
whole blood
sample_type
0
seq_deep
1
seq_shallow
R000469
sequencing_run
not collected
sex
SIO:23-59
specimen_voucher
SIO: 23-59
specimen_voucher_2
95etoh
storage_buffer
95etoh_4C
storage_buffer_temp
4
storage_temperature_C
7
storage_time_days
1
storage_time_weeks
1w
storage_time_weeks_st
minus 80 C
store_cond
not applicable
strain
not applicable
stud_book_number
15
time_before_EDTA_min
3 hr 15 min
time_in_EDTA_on_ince_min
whole blood
tissue
storage study
title
95etoh_4C_1w_SRE0
treatment
11
tube_number
16
tube_number