SAMN35061576
External Id
Salk
INSDC center name
2023-06-30T00:54:50.853Z
INSDC first public
2023-06-30T00:54:50.853Z
INSDC last update
SRS17636244
INSDC secondary accession
live
INSDC status
L001-675
LIBRARY_ID_ml
Model organism or animal
NCBI submission model
Model.organism.animal.1.0
NCBI submission package
SRS17636244
SRA accession
0
SRE
-90.36443269
SRE_change_N50
not collected
age
1530
aliquot_time
Michael lab at Salk
biomaterial_provider
not collected
birth_date
Pacific ocean
birth_location
not applicable
breed
not applicable
breeding_history
wild fish
breeding_method
not applicable
cell_line
whole blood
cell_subtype
blood
cell_type
JJM Salk
collected_by
2022-09-09
collection_date
1400
collection_time
not applicable
cultivar
not applicable
culture_collection
9-Sep-22
death_date
Cpun_090922_95etoh_22C_1w
description
not collected
dev_stage
not applicable
disease
not applicable
disease_stage
not applicable
ecotype
fish
experiment
16-Sep-22
extraction_date
36.4
femto_100k_1M
14.9
femto_10k_25k
6.4
femto_1_10k
100.3
femto_1_1M
30.5
femto_25k_50k
12.7
femto_50k_100k
49.1
femto_50k_1M
3.088
femto_conc
2022-11-07a
femto_date
109479
femto_mean_bp
16.6
fish_FL_cm
18.5
fish_TL_cm
82.6
fish_mass_g
fish_6
fish_number
4
fish_order
not applicable
genotype
USA: San Diego, CA
geo_loc_name
wild caught
growth_protocol
not applicable
health_state
Cpun090922
isolate
not applicable
isolation_source
32.76138 N 117.245 W
lat_lon
32.76138
latitute
MB jetty North
location
-117.245
longitude
24202
nanoplot_N50
24.2
nanoplot_N50_kb
6612.5
nanoplot_mean_RL
17.1
nanoplot_mean_RQ
94306833
nanoplot_total_bases
94.3
nanoplot_total_bases_Mb
24202
nanoplot_total_reads
2.25
nd_260230_b
2.26
nd_260230_m
2.26
nd_260230_mean
2.27
nd_260230_t
1.85
nd_260280_b
1.87
nd_260280_m
1.86
nd_260280_mean
1.86
nd_260280_t
1360
nd_conc_b
1311
nd_conc_m
1292.333333
nd_conc_mean
1206
nd_conc_t
6.088109729
nd_cv
31-Oct-22
nd_date
45
nd_days
1
nd_success
Chromis punctipinnis
http://purl.obolibrary.org/obo/NCBITaxon_231457
organism
not applicable
phenotype
34.61970613
q_cv
10/31/22
q_date
45
q_days
52.26666667
q_total_ug
320
qbr_conc_b
580
qbr_conc_m
522.6666667
qbr_conc_mean
668
qbr_conc_t
whole blood
sample_type
0
seq_deep
1
seq_shallow
R000469
sequencing_run
not collected
sex
SIO:23-59
specimen_voucher
SIO: 23-59
specimen_voucher_2
95etoh
storage_buffer
95etoh_22C
storage_buffer_temp
22
storage_temperature_C
7
storage_time_days
1
storage_time_weeks
1w
storage_time_weeks_st
minus 80 C
store_cond
not applicable
strain
not applicable
stud_book_number
5
time_before_EDTA_min
1 hr 25 min
time_in_EDTA_on_ince_min
whole blood
tissue
storage study
title
95etoh_22C_1w_SRE0
treatment
99
tube_number
10
tube_number