SAMN36012740
External Id
SARS-CoV-2/Human/USA/NY-CDC-VSX-A348894/2023
External Id
CDC-OAMD
INSDC center name
2023-06-28T00:00:00Z
INSDC first public
2023-06-28T04:34:24.747Z
INSDC last update
SRS18085772
INSDC secondary accession
live
INSDC status
SARS-CoV-2/Human/USA/NY-CDC-VSX-A348894/2023
Isolate
SARS-CoV-2: clinical or host-associated
NCBI submission model
SARS-CoV-2.cl.1.0
NCBI submission package
SRS18085772
SRA accession
Helix
collected_by
2023-06-07
collection_date
PrimeStore MTM - Nasal Swab
collection_device
PrimeStore MTM - Nasal Swab
collection_method
N
diagnostic_gene_name_1
ORF1ab
diagnostic_gene_name_2
S
diagnostic_gene_name_3
Unknown
diagnostic_pcr_Ct_value_1
Unknown
diagnostic_pcr_Ct_value_2
Unknown
diagnostic_pcr_Ct_value_3
Helix COVID-19 and Flu Test
diagnostic_pcr_protocol_1
Helix COVID-19 and Flu Test
diagnostic_pcr_protocol_2
Helix COVID-19 and Flu Test
diagnostic_pcr_protocol_3
USA: New York
geo_loc_name
Homo sapiens
host
29
host_age
COVID-19
host_disease
White
host_race
female
host_sex
PrimeStore MTM - Nasal Swab
isolation_source
XBB.1.16
lineage/clade name
Severe acute respiratory syndrome coronavirus 2
http://purl.obolibrary.org/obo/NCBITaxon_2697049
organism
baseline surveillance (random sampling)
purpose_of_sequencing
CDC Sars CoV2 Sequencing Baseline Constellation
title