SAMN35061668
External Id
Salk
INSDC center name
2023-06-30T00:54:51.357Z
INSDC first public
2023-06-30T00:54:51.357Z
INSDC last update
SRS17636403
INSDC secondary accession
live
INSDC status
L001-650
LIBRARY_ID_ml
Model organism or animal
NCBI submission model
Model.organism.animal.1.0
NCBI submission package
SRS17636403
SRA accession
0
SRE
-2.450562233
SRE_change_N50
not collected
age
1450
aliquot_time
Michael lab at Salk
biomaterial_provider
not collected
birth_date
Pacific ocean
birth_location
not applicable
breed
not applicable
breeding_history
wild fish
breeding_method
not applicable
cell_line
whole blood
cell_subtype
blood
cell_type
JJM Salk
collected_by
2022-07-09
collection_date
1200
collection_time
not applicable
cultivar
not applicable
culture_collection
7-Sep-22
death_date
Kazu_090722_95etoh_4C_6w
description
not collected
dev_stage
not applicable
disease
not applicable
disease_stage
not applicable
ecotype
fish
experiment
19-Oct-22
extraction_date
26.1
femto_100k_1M
18.5
femto_10k_25k
6.9
femto_1_10k
100.3
femto_1_1M
35.7
femto_25k_50k
13.5
femto_50k_100k
39.6
femto_50k_1M
3.0486
femto_conc
2022-11-07a
femto_date
103943
femto_mean_bp
28
fish_FL_cm
32
fish_TL_cm
519.7
fish_mass_g
fish_3
fish_number
1
fish_order
not applicable
genotype
USA: San Diego, CA
geo_loc_name
wild caught
growth_protocol
not applicable
health_state
Kazu090722
isolate
not applicable
isolation_source
32.75811 N 117.2449 W
lat_lon
32.75811
latitute
MB quivira jetty south
location
-117.2449
longitude
25790
nanoplot_N50
25.8
nanoplot_N50_kb
11625.3
nanoplot_mean_RL
17.7
nanoplot_mean_RQ
198490780
nanoplot_total_bases
198.5
nanoplot_total_bases_Mb
17074
nanoplot_total_reads
2.38
nd_260230_b
2.2
nd_260230_m
2.25
nd_260230_mean
2.17
nd_260230_t
1.82
nd_260280_b
1.85
nd_260280_m
1.843333333
nd_260280_mean
1.86
nd_260280_t
1153
nd_conc_b
337
nd_conc_m
588
nd_conc_mean
274
nd_conc_t
83.38728644
nd_cv
31-Oct-22
nd_date
12
nd_days
1
nd_success
Kyphosus azureus
http://purl.obolibrary.org/obo/NCBITaxon_2838349
organism
not applicable
phenotype
122.7342356
q_cv
10/31/22
q_date
12
q_days
61.23333333
q_total_ug
1480
qbr_conc_b
192
qbr_conc_m
612.3333333
qbr_conc_mean
165
qbr_conc_t
whole blood
sample_type
0
seq_deep
1
seq_shallow
R000469
sequencing_run
not collected
sex
SIO:23-58
specimen_voucher
SIO: 23-58
specimen_voucher_2
95etoh
storage_buffer
95etoh_4C
storage_buffer_temp
4
storage_temperature_C
42
storage_time_days
6
storage_time_weeks
6w
storage_time_weeks_st
minus 80 C
store_cond
not applicable
strain
not applicable
stud_book_number
5
time_before_EDTA_min
2 hr 45 min
time_in_EDTA_on_ince_min
whole blood
tissue
storage study
title
95etoh_4C_6w_SRE0
treatment
79
tube_number
65
tube_number