SAMN36346252
External Id
no
Fish perhabdovirus
ANSES
INSDC center name
2023-07-07T00:00:00Z
INSDC first public
2023-07-07T05:01:13.343Z
INSDC last update
live
INSDC status
MIGS/MIMS/MIMARKS.food-animal
NCBI submission model
MIGS.vi
NCBI submission model
MIGS.vi.food-animal.6.0
NCBI submission package
fish tank
coll_site_geo_feat
2022-07-01
collection_date
This is a report of a nearly full-length genome of a perhabdovirus isolated in 2022 on perch in a French farm. This virus is genetically related to virus 20/43, which was associated with an outbreak on perch in a farm in France in 2019. Both viruses represent a specific lineage of Perch rhabdovirus.
description
fish farm
env_broad_scale
water tank
env_local_scale
spring water
env_medium
France
food_origin
industrial
food_prod_char
fresh fish
food_product_type
France
geo_loc_name
meat
ifsac_category
human as food consumer
intended_consumer
grinded organs
isol_growth_condt
22/145
isolate
tank
isolation_source
46.67164738 N 5.55417042 E
lat_lon
water
neg_cont_type
Perhabdovirus perca
http://purl.obolibrary.org/obo/NCBITaxon_1256869
organism
perch rhabdovirus
pos_cont_type
in vitro cell culture
propagation
active surveillance in response to outbreak
purpose_of_sampling
MIGS Viral sample from Perhabdovirus perca
title