SAMN32145295
External Id
G10K
INSDC center name
2022-12-10T00:00:00Z
INSDC first public
2023-07-21T11:51:02.673Z
INSDC last update
SRS18387290
INSDC secondary accession
live
INSDC status
Model organism or animal
NCBI submission model
Model.organism.animal.1.0
NCBI submission package
#SE/A-66-26
Panamanian Ministry for the Environment Scientific Collection permit
SRS18387290
SRA accession
IACUC #2016-0601-2019-A2
Smithsonian Tropical Research Institute
IACUC #14-22B
Vassar College
Justin Touchon, Vassar College
biomaterial_provider
October 26, 2016
birth_date
Vasar College
birth_location
Justin Touchon, Erich Jarvis
collected_by
2018-03-28
collection_date
March 28, 2018
death_date
The hourglass treefrog (Dendropsophus ebraccatus) name refers to its hourglass shape. The hourglass treefrog is found throughout Central America. It has plasticity in reproduction, laying eggs in water under some conditions and laying eggs on land under others. This female is from a trio of samples, with the parents (mother aDenEbr4 and father aDenEbr5) collected in Gamboa, Panama, and the child (aDenEbr1) breed in captivity at Vassar College in Poughkeepsie, New York, done and coordinated by Justin Touchon, to create a high-quality reference genome for both maternal and paternal haplotypes of aDenEbr1. Genome sequencing and assembly was coordinated by Erich D. Jarvis and Olivier Fedrigo at the Rockefeller University Vertebrate Genome Lab, and as part of the Vertebrate Genomes Project (VGP).
description
adult
dev_stage
USA: Vassar College, Poughkeepsie, New York
geo_loc_name
aDenEbr1
isolate
41.684639 N 73.895553 W
lat_lon
Dendropsophus ebraccatus
http://purl.obolibrary.org/obo/NCBITaxon_150705
organism
female
sex
-80oC
store_cond
whole body, brain, muscle, liver
tissue
Animal sample from Dendropsophus ebraccatus (hourglass treefrog) for VGP genome aDenEbr1
title
flash frozen
treatment