SAMN30613462
External Id
University of Colorado, Boulder
INSDC center name
2022-08-31T00:00:00Z
INSDC first public
2022-08-31T09:56:33.303Z
INSDC last update
SRS14939415
INSDC secondary accession
live
INSDC status
R
Location
MIMS.me
NCBI submission model
MIGS/MIMS/MIMARKS.wastewater
NCBI submission model
MIMS.me.wastewater.6.0
NCBI submission package
N
SARS_CoV_2_detectable
SARS_CoV_2 virus detected (yes/no)
SARS_CoV_2_detectable_desc
SRS14939415
SRA accession
The name of the sample (in the format of XXX_## where XXX is the three-letter code for the sewer being sampled and ## is the day on which it was sampled. Day 1 = Sept 1st 2020
SampleID_desc
5
SewerDepth_ft
The depth of the sewer from which the sample was taken (in feet)
SewerDepth_ft_desc
0.1108
TSS (g/L)
dry wt. of total suspended solid particles (grams per liter)
TSS (g/L)_desc
11806786
TotalReadCount
The total number of sequencing reads in each sample after quality control filtering
TotalReadCounts_desc
Weekday
Weekend_Weekday
whether a sample was collected over the weekend (Saturday/Sunday) or during the weekday (Tuesday/Thursday)
Weekend_Weekday_desc
NO
cockroach_infestation
cockroaches detected at sampling location (yes/no)
cockroach_infestation_desc
2020-09-01
collection_date
Keywords: GSC:MIxS;MIMS:6.0
description
wastewater [ENVO:00002001]
env_broad_scale
sewage [ENVO:00002018]
env_local_scale
USA:Colorado,Boulder
geo_loc_name
40 N 105.3 W
lat_lon
Latitude and longitude have been rounded to 1 digit to preserve privacy of occupants of sampled buildings
lat_long_flag
wastewater metagenome
http://purl.obolibrary.org/obo/NCBITaxon_527639
organism
9.24
ph
378
resident_population_equivalents
estimated number of people contributing to the sewage collected from each sampling location
resident_population_equivalents_desc
9.24
sample_pH
10.3
sample_size
10.3
sample_volume_L
total volume of wastewater collected over 24h from each location/time (liters)
sample_volume_desc
municipal
sewage_type
estimated age of the sewer line (years)
sewer_age_desc
CONCRETE
sewer_material
material of the sewer, brick vs. concrete
sewer_material_desc
0.1108
suspend_solids
MIMS Environmental/Metagenome sample from wastewater metagenome
title
human waste
wastewater_type