SAMN32246272
External Id
Instituto Superior Tecnico
INSDC center name
2023-07-24T00:00:00Z
INSDC first public
2023-07-24T05:18:02.829Z
INSDC last update
SRS16150309
INSDC secondary accession
live
INSDC status
MIGS/MIMS/MIMARKS.miscellaneous
NCBI submission model
MIMARKS.survey
NCBI submission model
MIMARKS.survey.miscellaneous.6.0
NCBI submission package
SRS16150309
SRA accession
2019-11-13
collection_date
Keywords: GSC:MIxS;MIMARKS:6.0
description
environmental material ENVO:01000998
env_broad_scale
not applicable
env_local_scale
not applicable
env_medium
Portugal: Lisbon
geo_loc_name
Biocolonization greenish-yellowish stain (GYS) on the surface of a N oriented facade in site M building
isolation_source
not applicable
lat_lon
surface metagenome
http://purl.obolibrary.org/obo/NCBITaxon_1774230
organism
Surface swabbing with a sterile cotton swab (-S)
samp_collect_device
Total DNA extracted with the NucleoSpin Soil DNA Extraction kit (Mackerey-Nigel, Germany); ITS amplicons flanked by Illumina universal primers obtained with hybrid primers ITS1f and ITS2 and PlatinumTM II Hot-Start PCR Master Mix were sequenced using the MiSeq Illumina platform.
samp_mat_process
M-GYS-S
source_material_id
M-GYS-S
title