SAMN07460817
External Id
Evolutionary Genomics Group
INSDC center name
2017-11-01T00:00:00Z
INSDC first public
2023-07-28T21:07:23.541Z
INSDC last update
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
2016-03-14
collection date
5m, 20m
depth
Lake Baikal represents the world’s deepest (1637 m) and largest volume of fresh liquid water (23,000 km3), 20% of the earth’s unfrozen freshwater. This study describes the microbial communities of the Lake using high throughput sequencing. Water samples from two horizons (5 and 20 m) were taken on 14 March 2016 at the station of the ice camp, located in 7 km from the Listvyanka settlement, with the coordinates 51° 47.244' and 104° 56.346'. 30 L of water were filtered through the net (size 27-?m) and then filtered through nitrocellulose filters with a pore size of 0.22 ?m. DNA was extracted from the 0.22 micron filter (small, planktonic fraction) filter to obtain genomic DNA of the microbial community.
description
Freshwater biome
env biome
TRUE
environmental sample
Russia: Lake Baikal
geo loc name
Baikal-G2
isolate
water samples from two horizons (5 m and 20 m) were filtered through the net (size 27-um) and then filtered through nitrocellulose filters with a pore size of 0.22 um
isolation source
51.7874 N 104.9391 E
lat lon
lake water metagenome
metagenome source
TRUE
metagenomic
This BioSample is a metagenomic assembly obtained from the lake water metagenome BioSamples: SAMN07445447 and SAMN07445423.
note
Actinomycetes bacterium
http://purl.obolibrary.org/obo/NCBITaxon_1883427
organism
metagenomic assembly
sample type
Actinobacterium-acI-Baikal-G2
title