SAMN08018396
External Id
University of Queensland
INSDC center name
2017-12-15T00:00:00Z
INSDC first public
2023-07-28T21:07:25.174Z
INSDC last update
SRS2846088
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2846088
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
78.75%
completeness_estimated
4.69%
contamination_estimated
true
environmental sample
5.86x
genome coverage
UBA8918
isolate
hydrocarbon
isolation source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
hydrocarbon metagenome
metagenome source
true
metagenomic
hydrocarbon metagenome
note
Actinomycetes bacterium
http://purl.obolibrary.org/obo/NCBITaxon_1883427
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Uncultivated p__Actinobacteria bacterium UBA8918 genome recovered from SRX327722
title
This BioSample is a metagenomic assembly obtained from the hydrocarbon metagenome reads: SRR943330,SRR943329,SRR942941,SRR943334,SRR943332,SRR943333,SRR943331.
value