CFSANSMP000119633
External Id
SAMN31493123
External Id
FDA
INSDC center name
2022-10-27T00:00:00Z
INSDC first public
2023-08-31T10:24:51.921Z
INSDC last update
SRS15557024
INSDC secondary accession
live
INSDC status
SARS-CoV-2: wastewater surveillance
NCBI submission model
SARS-CoV-2.wwsurv.1.0
NCBI submission package
PRJNA757447
ProjectAccession
SRS15557024
SRA accession
FDA Center for Food Safety and Applied Nutrition
collected_by
2022-07-20
collection_date
MD01
collection_site_id
1L
collection_volume
promega wastewater large volume tna capture kit
concentration_method
promega automated tna kit
extraction_method
USA: Maryland
geo_loc_name
wastewater
isolation_source
wastewater metagenome
http://purl.obolibrary.org/obo/NCBITaxon_527639
organism
wastewater metagenome
organism
GenomeTrakr
project_name
public health surveillance community-level
purpose_of_ww_sampling
detection of target organism by RT PCR or ddPCR
purpose_of_ww_sequencing
pool22_rep2a_dil
sample_name
SARS-CoV-2: wastewater surveillance
sample_title
specimens pooled
specimen_processing
weekly pooling:composite_220714-07_20 biological replicates_3 technical replicates; tDNA diluted 1:1
specimen_processing_details
pool22_rep2a_dil
specimen_processing_id
SARS-CoV-2: wastewater surveillance
title
Not Collected
ww_flow
Not Collected
ww_industrial_effluent_percent
0.0
ww_ph
29758
ww_population
wastewater treatment plant
ww_population_source
Not Provided
ww_pre_treatment
Not Collected
ww_primary_sludge_retention_time
Not Provided
ww_processing_protocol
24
ww_sample_duration
raw wastewater
ww_sample_matrix
Not Collected
ww_sample_salinity
wastewater treatment plant
ww_sample_site
composite
ww_sample_type
Not Provided
ww_surv_jurisdiction
CFSANSMP000119633
ww_surv_system_sample_id
SARS-CoV-2
ww_surv_target_1
Not Provided
ww_surv_target_1_conc
Copies/L
ww_surv_target_1_conc_unit
N gene (N1)
ww_surv_target_1_gene
yes
ww_surv_target_1_known_present
GoTaq Enviro Wastewater SARS-CoV-2 Systems- Promega
ww_surv_target_1_protocol
Not Collected
ww_temperature
0
ww_total_suspended_solids