SAMN31167894
External Id
Arizona State University Wastewater-based Epidemiology of Viruses
INSDC center name
2023-10-09T00:50:21.020Z
INSDC first public
2023-10-09T00:50:21.020Z
INSDC last update
SRS15331022
INSDC secondary accession
live
INSDC status
SARS-CoV-2: wastewater surveillance
NCBI submission model
SARS-CoV-2.wwsurv.1.0
NCBI submission package
SRS15331022
SRA accession
2021-07-22
collection_date
10X
collection_site_id
06:00:00
collection_time
amicon ultrafiltration
concentration_method
qiagen rneasy kit
extraction_method
USA: Arizona, Maricopa, Tempe
geo_loc_name
wastewater
isolation_source
wastewater metagenome
http://purl.obolibrary.org/obo/NCBITaxon_527639
organism
severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) surveillance in wastewater samples in the USA (RADx-rad)
project_name
research
purpose_of_ww_sampling
research
purpose_of_ww_sequencing
Psomagen Inc.
sequenced_by
Code
title
7.34
ww_ph
missing
ww_population
No
ww_pre_treatment
24
ww_sample_duration
raw wastewater
ww_sample_matrix
other
ww_sample_site
composite
ww_sample_type
SARS-CoV-2
ww_surv_target_1
88200
ww_surv_target_1_conc
copies/L wastewater
ww_surv_target_1_conc_unit
N1
ww_surv_target_1_gene
yes
ww_surv_target_1_known_present
Corman, Victor M., et al. Detection of 2019 novel coronavirus (2019-nCoV) by real-time RT-PCR. Eurosurveillance 25.3 (2020): 2000045.
ww_surv_target_1_protocol
6.6
ww_temperature