pig_PAM
ERS848065
SRA accession
ATCC
biomaterial provider
Landrace
http://purl.obolibrary.org/obo/LBO_0000692
breed
CRL-2845
catalogue number
3D4/2
cell line
alveolar macrophage
http://purl.obolibrary.org/obo/CL_0000583
cell type
2013-08
YYYY-MM
date established
pig macrophage macrophage (alveolar); immortalized with SV40 large T antigen transformed with pSV3-neo
description
cell line
http://purl.obolibrary.org/obo/CLO_0000031
material
Sus scrofa
http://purl.obolibrary.org/obo/NCBITaxon_9823
organism
FAANG
project
doi://10.1016/S0166-0934(02)00085-X
publication
female genotypic sex
http://purl.obolibrary.org/obo/PATO_0020002
sex
This study try to figure out the DNA methylation of swine which is one of important biomedical model animals as a part of the international swine methylome consortium. The single nucleotide resolution of swine DNA methylation profiles were generated using reduced representative bisulfite sequencing.The genomic DNA was isolated from five distinct tissues (neocortex, olfactory epithelium, liver, femoral muscle and spleen) of three different nine week-old male pigs and pulmonary alveolar macrophage cell line from the ATCC (3D4/2). The genomic DNA from the each tissues of three individual were pooled according to the same tissue type before the making a RRBS library.
submission description
GSB-3257
submission identifier
Konkuk-FAANG-MinKyeung-pig-170131
submission title