DW456
ERS2686785
SRA accession
rice
http://purl.obolibrary.org/obo/NCBITaxon_4530
common name
Chet Trui
cultivar
Chet Trui
description
Vietnam
geographic location (country and/or sea)
Oryza sativa
http://purl.obolibrary.org/obo/NCBITaxon_4530
organism
Oryza sativa
http://purl.obolibrary.org/obo/NCBITaxon_4530
scientific name
Oryza sativa Indica Group (indica)
sub species
We initiated the project to identify factors regulating the deepwater response in rice. we carried out a genome-wide association study (GWAS) using a diversity panel of 28 Asian cultivated rice and a specialized panel consisting of 40 deepwater rice varieties. The extracted genomic DNA was subjected to genotyping with single-nucleotide polymorphism (SNP) markers using an Affymetrix GeneChip Rice 44k SNP Genotyping Array.
submission description
GSB-357
submission identifier
Genome wide association study of deepwater rice (Oryza sativa)
submission title