M16-1216-T6
ERS2006624
SRA accession
2016
collected by
Netherlands
collection date
Human
http://purl.obolibrary.org/obo/NCBITaxon_9606
common name
Vertebrea
derived from
Tumor - Vertebrea - Biopsy of vertebrea tumor with LOH: chr 1,8,11,13,17,18,19; T6:P53ex11:c.1155delC, p.F385
description
Homo sapiens
http://purl.obolibrary.org/obo/NCBITaxon_9606
organism
Homo sapiens
http://purl.obolibrary.org/obo/NCBITaxon_9606
scientific name
male
http://purl.obolibrary.org/obo/PATO_0000384
sex
Unconfirmed
specimen voucher
human
http://purl.obolibrary.org/obo/NCBITaxon_9606
subject
Development of the web-application SNPitty that allows interactive visualization and interrogation of Variant Call Format (VCF) files by utilizing B-allele frequencies (BAF) of single nucleotide polymorphisms (SNPs), coverage metrics and copy-numbers.
submission description
GSB-5789
submission identifier
SNPitty: An intuitive web-application for interactive B-allele frequency and copy-number visualization of next generation sequencing data.
submission title